Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Gm12734-201ENSMUST00000120228 948 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Gm25176-201ENSMUST00000122640 125 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Gm5473-201ENSMUST00000179326 642 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Gm27820-201ENSMUST00000183628 175 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Mir6401-201ENSMUST00000184499 109 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Mir7087-201ENSMUST00000184840 70 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Tmem167-ps3-201ENSMUST00000186718 178 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Gm6501-201ENSMUST00000187178 916 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 2610044O15Rik8-206ENSMUST00000191043 504 ntTSL 2 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 4930402F11Rik-201ENSMUST00000207348 1000 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Gm44992-209ENSMUST00000209680 1083 ntTSL 5 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Gm29817-201ENSMUST00000210098 172 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 AC132232.1-201ENSMUST00000214667 1019 ntTSL 3 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Olfr188-ps1-202ENSMUST00000220235 925 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 AC154636.3-201ENSMUST00000221489 1214 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Olfr479-201ENSMUST00000063151 1111 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Olfr744-201ENSMUST00000066457 1105 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Gm25139-201ENSMUST00000083247 210 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 n-R5s46-201ENSMUST00000083960 116 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Stxbp3-ps-201ENSMUST00000090527 758 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Olfr1141-201ENSMUST00000099846 936 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Wwp1-201ENSMUST00000035982 4832 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Tfec-201ENSMUST00000031533 1787 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Gvin1-202ENSMUST00000183409 9005 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Tnrc6b-201ENSMUST00000067689 17332 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 4930444F02Rik-201ENSMUST00000215429 6871 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Olfr181-201ENSMUST00000075361 1391 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Gm43426-201ENSMUST00000197287 2597 ntBASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Ddx56Q9D0R4 CT009733.2-202ENSMUST00000224171 4748 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 AC113059.2-201ENSMUST00000213462 3016 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm37674-201ENSMUST00000194177 1834 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm32061-201ENSMUST00000207232 3478 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Olfr1065-202ENSMUST00000216162 2148 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Slc5a12-202ENSMUST00000111026 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm19136-201ENSMUST00000190706 2067 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm23910-201ENSMUST00000104597 132 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm4596-201ENSMUST00000117197 442 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm11975-201ENSMUST00000118772 481 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm12748-201ENSMUST00000120763 504 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm22804-201ENSMUST00000158052 101 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm5538-201ENSMUST00000168156 1235 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Rab26os-201ENSMUST00000176215 477 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Serpinb10-202ENSMUST00000182198 1265 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm29031-201ENSMUST00000185316 614 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm29000-201ENSMUST00000185444 614 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm28204-201ENSMUST00000185934 614 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm28290-201ENSMUST00000186505 614 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm28161-201ENSMUST00000186669 614 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm7266-201ENSMUST00000187999 405 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm28749-209ENSMUST00000189599 614 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm33163-201ENSMUST00000194504 614 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm9332-201ENSMUST00000198431 730 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Tas2r142-ps5-201ENSMUST00000204651 929 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Olfr1470-ps1-201ENSMUST00000208620 949 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm45874-201ENSMUST00000212423 346 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Olfr858-ps1-201ENSMUST00000212591 930 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Olfr1244-ps1-201ENSMUST00000213226 683 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 AC160966.1-201ENSMUST00000217147 933 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 AC156952.1-201ENSMUST00000220361 793 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 AC164164.2-201ENSMUST00000221809 785 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm2645-201ENSMUST00000223516 547 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 AC090496.1-201ENSMUST00000226020 260 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 AC154252.1-201ENSMUST00000226041 473 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 CT009550.5-201ENSMUST00000226286 382 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 AC123665.6-201ENSMUST00000228568 538 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Olfr1467-201ENSMUST00000054687 927 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Rpl21-ps13-201ENSMUST00000072532 483 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm6462-201ENSMUST00000081488 304 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Rpl29-ps2-201ENSMUST00000086508 478 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Olfr1061-201ENSMUST00000099889 942 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm7529-201ENSMUST00000213753 1897 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Olfr980-202ENSMUST00000216463 3050 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Gm43178-201ENSMUST00000197257 1386 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Olfr1493-ps1-202ENSMUST00000208667 1828 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 Map9-206ENSMUST00000195640 6162 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Ddx56Q9D0R4 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Nlrp9b-201ENSMUST00000073151 3346 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm45222-201ENSMUST00000207029 4307 ntBASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Olfr1443-201ENSMUST00000049724 4343 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Ddx56Q9D0R4 Gm12845-202ENSMUST00000204276 1431 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms