Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Brinp3-201ENSMUST00000074622 4023 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx6-1Q99MA9 Ints6l-202ENSMUST00000101553 3201 ntTSL 2 BASIC5.56□□□□□ -1.52
Nkx6-1Q99MA9 Gm10220-201ENSMUST00000088236 2980 ntAPPRIS P1 TSL 5 BASIC5.56□□□□□ -1.52
Nkx6-1Q99MA9 Gm37630-201ENSMUST00000194210 1456 ntBASIC5.56□□□□□ -1.52
Nkx6-1Q99MA9 Gm5128-202ENSMUST00000180198 3836 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx6-1Q99MA9 Gm44530-201ENSMUST00000207920 3559 ntBASIC5.56□□□□□ -1.52
Nkx6-1Q99MA9 Wdr17-206ENSMUST00000144711 4720 ntAPPRIS P3 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx6-1Q99MA9 Ndst3-203ENSMUST00000132112 4460 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx6-1Q99MA9 Ugt2a1-201ENSMUST00000147854 2570 ntAPPRIS P1 TSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx6-1Q99MA9 Gm2026-201ENSMUST00000109007 1621 ntTSL 1 (best) BASIC5.56□□□□□ -1.52
Nkx6-1Q99MA9 Gm6871-202ENSMUST00000110214 1638 ntAPPRIS P5 TSL 5 BASIC5.56□□□□□ -1.52
Nkx6-1Q99MA9 Gm21122-201ENSMUST00000191548 3452 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Them5-202ENSMUST00000198083 1378 ntTSL 5 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 2700089I24Rik-201ENSMUST00000190204 1827 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Zfp788-203ENSMUST00000100275 3177 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Vmn1r220-204ENSMUST00000227950 6238 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Hgf-201ENSMUST00000030683 2642 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Olfr1279-202ENSMUST00000213823 3299 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Olfr55-204ENSMUST00000216633 4758 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Vmn1r200-204ENSMUST00000227326 5449 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Pcdh9-202ENSMUST00000192221 5161 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Brd8-203ENSMUST00000115765 3869 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Dtna-206ENSMUST00000221880 4490 ntAPPRIS ALT2 TSL 2 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm24715-201ENSMUST00000102377 95 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Wap-201ENSMUST00000102910 551 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Igkv8-18-201ENSMUST00000103390 395 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm11878-201ENSMUST00000117908 400 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm11843-201ENSMUST00000118984 425 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Olfr607-201ENSMUST00000119283 915 ntAPPRIS ALT2 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm11904-201ENSMUST00000120562 248 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm12914-201ENSMUST00000148635 305 ntTSL 5 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Tmem216-206ENSMUST00000154383 927 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm24289-201ENSMUST00000157629 135 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm24735-201ENSMUST00000158859 118 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Ear-ps5-201ENSMUST00000164700 463 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm17472-201ENSMUST00000167638 352 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Mir5103-201ENSMUST00000175111 79 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm22355-201ENSMUST00000175531 96 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Mir6539-201ENSMUST00000183732 110 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Rpl23a-ps7-201ENSMUST00000185437 460 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm28873-201ENSMUST00000186130 667 ntTSL 2 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm28863-201ENSMUST00000186888 431 ntTSL 3 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm29376-201ENSMUST00000189357 835 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 4930434B07Rik-201ENSMUST00000190254 1020 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm43744-201ENSMUST00000196387 688 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm44456-201ENSMUST00000196554 89 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm42513-201ENSMUST00000197831 2119 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm43109-201ENSMUST00000198269 753 ntTSL 3 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm8041-201ENSMUST00000199755 616 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm43631-201ENSMUST00000202011 369 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm44955-201ENSMUST00000208843 229 ntTSL 5 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm44622-201ENSMUST00000209128 1033 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Olfr490-202ENSMUST00000211345 1275 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 AC142227.2-201ENSMUST00000220675 400 ntTSL 5 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 AC116589.3-202ENSMUST00000221770 649 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 AC116589.6-201ENSMUST00000222252 649 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 AV026068-231ENSMUST00000225862 482 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 AC117202.2-201ENSMUST00000226491 1101 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 CT030704.1-201ENSMUST00000227521 699 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Defb8-201ENSMUST00000033854 287 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm10064-201ENSMUST00000071235 399 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Olfr1054-201ENSMUST00000099895 939 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Zfp850-202ENSMUST00000180024 2070 ntAPPRIS P1 TSL 5 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm12258-202ENSMUST00000139337 4100 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Zfp955a-201ENSMUST00000008830 1638 ntAPPRIS P1 TSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm37607-201ENSMUST00000194925 2623 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Gm42756-201ENSMUST00000196601 2614 ntTSL 1 (best) BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Asap1-205ENSMUST00000175793 4314 ntAPPRIS ALT2 TSL 5 BASIC5.55□□□□□ -1.52
Nkx6-1Q99MA9 Lamp3-201ENSMUST00000081880 3343 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Slco6d1-201ENSMUST00000027575 2328 ntAPPRIS P4 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Olfr693-202ENSMUST00000215541 4015 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Zfp87-204ENSMUST00000181767 2656 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm37911-201ENSMUST00000193099 1545 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Mef2c-202ENSMUST00000163888 6277 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Ncoa7-212ENSMUST00000217644 2256 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Ccdc146-202ENSMUST00000115245 3389 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Dnajc13-203ENSMUST00000186788 6747 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm20750-201ENSMUST00000194274 3515 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Naip3-201ENSMUST00000118082 4208 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gabrb1-201ENSMUST00000031122 13737 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm14670-201ENSMUST00000117327 337 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Psmb6-ps-201ENSMUST00000117520 713 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm14771-201ENSMUST00000118249 203 ntBASIC5.54□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms