Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Traj59-202ENSMUST00000197589 62 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Olfr864-ps1-201ENSMUST00000212664 930 ntBASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Gm5176-201ENSMUST00000218244 1227 ntBASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Wfdc17-201ENSMUST00000092836 533 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Stag2-202ENSMUST00000115072 5955 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Gm37356-201ENSMUST00000193362 1613 ntBASIC5.32□□□□□ -1.56
Nup88Q8CEC0 B930086L07Rik-201ENSMUST00000209529 3738 ntBASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Gm7988-201ENSMUST00000196623 2297 ntBASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Olfr963-202ENSMUST00000215649 2203 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Cntn6-201ENSMUST00000089215 3702 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 2900092N22Rik-201ENSMUST00000193601 1409 ntBASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Arhgef6-201ENSMUST00000033468 4569 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Usp15-211ENSMUST00000220377 11525 ntAPPRIS P2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Clec1b-203ENSMUST00000112081 614 ntAPPRIS ALT2 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Gm14628-201ENSMUST00000117508 635 ntBASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Gm14861-201ENSMUST00000119451 455 ntBASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Gm12884-201ENSMUST00000120371 325 ntBASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Gm25913-201ENSMUST00000157617 135 ntBASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Gm24751-201ENSMUST00000157844 102 ntBASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Vmn1r167-201ENSMUST00000164527 948 ntAPPRIS P1 BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Gm5916-201ENSMUST00000168452 1142 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Gm20428-201ENSMUST00000174365 283 ntBASIC5.31□□□□□ -1.56
Nup88Q8CEC0 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Gm28703-201ENSMUST00000185312 1159 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Gm28685-201ENSMUST00000187545 1101 ntBASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Ighv8-1-201ENSMUST00000194897 291 ntBASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Gm43020-201ENSMUST00000197178 372 ntTSL 3 BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Gm44137-201ENSMUST00000203670 367 ntBASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Gm45007-201ENSMUST00000206237 366 ntBASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 AC154264.1-201ENSMUST00000216064 386 ntTSL 5 BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 AC159293.2-201ENSMUST00000222289 424 ntBASIC5.31□□□□□ -1.56
Nup88Q8CEC0 AC154198.1-201ENSMUST00000222839 424 ntBASIC5.31□□□□□ -1.56
Nup88Q8CEC0 AC141884.1-201ENSMUST00000226327 636 ntBASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Cnot6l-210ENSMUST00000155901 8564 ntAPPRIS P3 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Xiap-202ENSMUST00000055483 6374 ntAPPRIS P1 TSL 1 (best) BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 Pign-201ENSMUST00000070699 6528 ntAPPRIS P1 TSL 5 BASIC5.31□□□□□ -1.56
Nup88Q8CEC0 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Hm629797-201ENSMUST00000183645 2398 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Gm35755-201ENSMUST00000222392 2077 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Zfp458-204ENSMUST00000225772 3485 ntAPPRIS ALT2 BASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Ankrd31-201ENSMUST00000207464 5146 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Slc22a22-201ENSMUST00000022995 2015 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Vmn2r-ps2-201ENSMUST00000121053 765 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Gm24774-201ENSMUST00000157384 134 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Gm22519-201ENSMUST00000158270 178 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Gm6245-201ENSMUST00000164699 768 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Gm17103-201ENSMUST00000168897 549 ntTSL 3 BASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Mir6933-201ENSMUST00000184982 81 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Gm28847-201ENSMUST00000186778 700 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Gm28615-201ENSMUST00000187527 482 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 4930548G14Rik-202ENSMUST00000190364 1185 ntTSL 2 BASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Gm37636-201ENSMUST00000193583 359 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Gm18843-201ENSMUST00000194982 719 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Mir142-201ENSMUST00000198092 64 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Gm18660-201ENSMUST00000199542 629 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Gm29793-201ENSMUST00000202874 460 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Gm44972-201ENSMUST00000206419 406 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Gm44845-201ENSMUST00000208773 335 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Nup88Q8CEC0 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC5.3□□□□□ -1.56
Nup88Q8CEC0 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC5.3□□□□□ -1.56
Nup88Q8CEC0 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.3□□□□□ -1.56
Nup88Q8CEC0 AC153522.1-201ENSMUST00000220047 1090 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Olfr844-201ENSMUST00000054106 930 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Nup88Q8CEC0 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Olfr870-201ENSMUST00000086476 936 ntAPPRIS P1 BASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Gm10780-201ENSMUST00000099459 285 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Hnrnpr-207ENSMUST00000148843 21452 ntAPPRIS P1 TSL 1 (best) BASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Tcf12-207ENSMUST00000183918 4308 ntTSL 1 (best) BASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Gm43648-201ENSMUST00000197775 2485 ntBASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC5.3□□□□□ -1.56
Nup88Q8CEC0 Olfr1123-203ENSMUST00000216208 5245 ntAPPRIS ALT2 TSL 2 BASIC5.3□□□□□ -1.56
Nup88Q8CEC0 2610002M06Rik-201ENSMUST00000120722 5842 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC5.29□□□□□ -1.56
Nup88Q8CEC0 B130011K05Rik-201ENSMUST00000151765 3270 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm43831-201ENSMUST00000200461 2598 ntBASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm28964-202ENSMUST00000186771 1502 ntTSL 5 BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm29301-202ENSMUST00000189344 1502 ntTSL 5 BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Smarca2-220ENSMUST00000207054 2333 ntTSL 5 BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Pak3-204ENSMUST00000112865 8484 ntAPPRIS P3 TSL 5 BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Olfr1224-ps1-204ENSMUST00000216833 2294 ntAPPRIS P1 TSL 5 BASIC5.29□□□□□ -1.56
Nup88Q8CEC0 Gm28074-201ENSMUST00000190424 1497 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 78.7 ms