Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Il7-201ENSMUST00000168269 2307 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm37760-201ENSMUST00000194726 3841 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Trim56Q80VI1 AC160028.2-201ENSMUST00000218937 2519 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Cnot4-202ENSMUST00000114989 3279 ntAPPRIS ALT1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm37049-201ENSMUST00000194356 1983 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm42492-201ENSMUST00000195780 2915 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Elavl4-201ENSMUST00000102722 4107 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Elavl4-203ENSMUST00000106597 4149 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Nusap1-202ENSMUST00000068225 2960 ntAPPRIS P3 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm17767-202ENSMUST00000190169 3049 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Olfr448-202ENSMUST00000213952 3024 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Olfr204-202ENSMUST00000216261 5371 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Prl2b1-202ENSMUST00000102954 870 ntAPPRIS P2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm14050-201ENSMUST00000117052 346 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm8424-201ENSMUST00000117716 988 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm15060-201ENSMUST00000119550 948 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm11606-201ENSMUST00000120706 617 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm13865-201ENSMUST00000120957 865 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm15428-201ENSMUST00000121352 333 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm12147-201ENSMUST00000144024 182 ntTSL 3 BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm25559-201ENSMUST00000157182 74 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm26489-201ENSMUST00000157880 264 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Mir1963-201ENSMUST00000158594 59 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Scarna10-201ENSMUST00000158992 325 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Vmn1r-ps66-201ENSMUST00000173436 612 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Olfr756-ps1-201ENSMUST00000173450 928 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm18522-201ENSMUST00000173947 650 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Obox4-ps11-201ENSMUST00000176150 724 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Mir7087-201ENSMUST00000184840 70 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm28094-201ENSMUST00000185262 390 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 1700128A07Rik-201ENSMUST00000186311 860 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm29216-201ENSMUST00000187117 492 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 1700108J01Rik-201ENSMUST00000187423 484 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 1700001D01Rik-201ENSMUST00000188654 565 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm29345-201ENSMUST00000189213 399 ntTSL 3 BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm37650-201ENSMUST00000193570 248 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm43370-201ENSMUST00000196437 284 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm43505-201ENSMUST00000200579 139 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 1700065L07Rik-201ENSMUST00000204961 614 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm30790-201ENSMUST00000208256 958 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm45777-201ENSMUST00000213009 301 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Olfr1088-ps1-201ENSMUST00000213686 863 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Olfr175-ps1-202ENSMUST00000215069 1201 ntAPPRIS P1 TSL 5 BASIC6.44□□□□□ -1.38
Trim56Q80VI1 AC073947.3-201ENSMUST00000215576 766 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm33091-201ENSMUST00000217798 748 ntTSL 3 BASIC6.44□□□□□ -1.38
Trim56Q80VI1 1700030L22Rik-202ENSMUST00000222223 704 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 AC123705.4-201ENSMUST00000222411 493 ntTSL 3 BASIC6.44□□□□□ -1.38
Trim56Q80VI1 AC238676.3-201ENSMUST00000223042 154 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 AC138667.2-201ENSMUST00000224880 598 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 AC154467.1-201ENSMUST00000227527 449 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Klrc1-202ENSMUST00000032271 822 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Meig1-201ENSMUST00000064685 706 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Vaultrc5-201ENSMUST00000083211 143 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 AC165080.4-201ENSMUST00000213591 9507 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Gm44801-201ENSMUST00000207644 2060 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Tsga10-207ENSMUST00000155852 2861 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Ubr4-212ENSMUST00000165860 15798 ntTSL 5 BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Atad2-208ENSMUST00000228783 3472 ntAPPRIS ALT2 BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Otc-201ENSMUST00000049910 2319 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 AC127371.2-201ENSMUST00000228108 1933 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Fbxw14-201ENSMUST00000112041 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
Trim56Q80VI1 Chrm3-201ENSMUST00000063093 1770 ntAPPRIS P1 BASIC6.44□□□□□ -1.38
Trim56Q80VI1 4930563J15Rik-201ENSMUST00000218306 3468 ntBASIC6.44□□□□□ -1.38
Trim56Q80VI1 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
Trim56Q80VI1 Vmn1r39-204ENSMUST00000227555 2297 ntAPPRIS P2 BASIC6.43□□□□□ -1.38
Trim56Q80VI1 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.43□□□□□ -1.38
Trim56Q80VI1 Stxbp5-201ENSMUST00000038213 8825 ntAPPRIS ALT1 TSL 5 BASIC6.43□□□□□ -1.38
Trim56Q80VI1 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
Trim56Q80VI1 Serpinb5-202ENSMUST00000112729 2531 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim56Q80VI1 Zfp763-201ENSMUST00000087654 3407 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim56Q80VI1 AC154354.1-201ENSMUST00000224585 2109 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 D030045P18Rik-202ENSMUST00000213571 2370 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 Naip2-201ENSMUST00000067975 4709 ntAPPRIS P2 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm15087-201ENSMUST00000117465 1172 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm15531-201ENSMUST00000118062 252 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm8757-201ENSMUST00000119660 372 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 Olfr405-ps1-201ENSMUST00000120649 936 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm12650-201ENSMUST00000121966 258 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm24635-201ENSMUST00000122712 128 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm13062-201ENSMUST00000151337 562 ntTSL 3 BASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm22491-201ENSMUST00000157190 102 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm25906-201ENSMUST00000158489 126 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 Plgrkt-201ENSMUST00000016639 1012 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm22420-201ENSMUST00000178795 126 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm25942-201ENSMUST00000180080 110 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm28017-201ENSMUST00000183434 126 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim56Q80VI1 Klrb1-ps1-201ENSMUST00000184388 701 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm29335-201ENSMUST00000188361 459 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 1700084F23Rik-205ENSMUST00000191362 743 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm2979-201ENSMUST00000193442 463 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm8458-201ENSMUST00000196658 819 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
Trim56Q80VI1 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC6.43□□□□□ -1.38
Trim56Q80VI1 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 72.2 ms