Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim28Q62318 AC164116.1-201ENSMUST00000225810 622 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim28Q62318 Mecom-201ENSMUST00000061088 348 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim28Q62318 Olfr664-201ENSMUST00000072887 966 ntAPPRIS P5 BASIC6.21□□□□□ -1.42
Trim28Q62318 Olfr917-201ENSMUST00000076542 930 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim28Q62318 Gm6177-201ENSMUST00000085589 465 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Acsm3-205ENSMUST00000106529 3295 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim28Q62318 Zfp644-201ENSMUST00000045466 5569 ntAPPRIS P2 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim28Q62318 Esp31-201ENSMUST00000174742 1308 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.42
Trim28Q62318 Nlrp5-202ENSMUST00000086341 3471 ntAPPRIS ALT2 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim28Q62318 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim28Q62318 Spp1-204ENSMUST00000112747 1507 ntAPPRIS P3 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim28Q62318 Rgs17-204ENSMUST00000131996 8107 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim28Q62318 AC162938.2-205ENSMUST00000217551 2828 ntBASIC6.2□□□□□ -1.42
Trim28Q62318 Zfp780b-204ENSMUST00000206685 3940 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim28Q62318 Zfp965-201ENSMUST00000109002 957 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim28Q62318 Mir669d-2-201ENSMUST00000116854 86 ntBASIC6.2□□□□□ -1.42
Trim28Q62318 Gm16471-201ENSMUST00000121940 618 ntBASIC6.2□□□□□ -1.42
Trim28Q62318 Gm15584-201ENSMUST00000123231 759 ntTSL 2 BASIC6.2□□□□□ -1.42
Trim28Q62318 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC6.2□□□□□ -1.42
Trim28Q62318 Gm14027-201ENSMUST00000135186 622 ntTSL 3 BASIC6.2□□□□□ -1.42
Trim28Q62318 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC6.2□□□□□ -1.42
Trim28Q62318 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim28Q62318 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC6.2□□□□□ -1.42
Trim28Q62318 Gm23069-201ENSMUST00000158240 311 ntBASIC6.2□□□□□ -1.42
Trim28Q62318 Gm25413-201ENSMUST00000158544 312 ntBASIC6.2□□□□□ -1.42
Trim28Q62318 Olfr625-ps1-202ENSMUST00000190218 927 ntAPPRIS ALT2 BASIC6.2□□□□□ -1.42
Trim28Q62318 Gm37175-201ENSMUST00000192023 587 ntTSL 5 BASIC6.2□□□□□ -1.42
Trim28Q62318 Gm38221-201ENSMUST00000195146 365 ntBASIC6.2□□□□□ -1.42
Trim28Q62318 Tshb-206ENSMUST00000200041 537 ntAPPRIS P1 TSL 5 BASIC6.2□□□□□ -1.42
Trim28Q62318 Gm43810-201ENSMUST00000201018 232 ntBASIC6.2□□□□□ -1.42
Trim28Q62318 Gm45007-201ENSMUST00000206237 366 ntBASIC6.2□□□□□ -1.42
Trim28Q62318 4930545L08Rik-201ENSMUST00000215688 566 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim28Q62318 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC6.2□□□□□ -1.42
Trim28Q62318 AC154626.1-201ENSMUST00000226070 311 ntBASIC6.2□□□□□ -1.42
Trim28Q62318 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim28Q62318 Olfr617-201ENSMUST00000048265 957 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim28Q62318 Olfr1489-201ENSMUST00000053113 1111 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim28Q62318 Olfr827-201ENSMUST00000058123 1058 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim28Q62318 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim28Q62318 Gm9958-201ENSMUST00000068250 1284 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim28Q62318 Olfr824-201ENSMUST00000074161 948 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim28Q62318 Olfr823-201ENSMUST00000081469 948 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim28Q62318 Mir338-201ENSMUST00000083666 98 ntBASIC6.2□□□□□ -1.42
Trim28Q62318 Olfr172-201ENSMUST00000095991 1089 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim28Q62318 Olfr1107-201ENSMUST00000099865 1109 ntAPPRIS P1 BASIC6.2□□□□□ -1.42
Trim28Q62318 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim28Q62318 Vmn1r80-206ENSMUST00000228028 6918 ntBASIC6.2□□□□□ -1.42
Trim28Q62318 Glmn-203ENSMUST00000100949 1759 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim28Q62318 Vps13c-201ENSMUST00000077879 11527 ntAPPRIS P1 TSL 1 (best) BASIC6.2□□□□□ -1.42
Trim28Q62318 Ckap5-201ENSMUST00000046769 6511 ntTSL 1 (best) BASIC6.2□□□□□ -1.42
Trim28Q62318 AC122357.1-201ENSMUST00000221652 1515 ntBASIC6.2□□□□□ -1.42
Trim28Q62318 Psmc6-201ENSMUST00000022380 2234 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim28Q62318 Syt14-205ENSMUST00000215093 9274 ntTSL 5 BASIC6.19□□□□□ -1.42
Trim28Q62318 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC6.19□□□□□ -1.42
Trim28Q62318 Glyat-202ENSMUST00000119960 3296 ntTSL 1 (best) BASIC6.19□□□□□ -1.42
Trim28Q62318 Traj50-201ENSMUST00000103693 63 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trim28Q62318 Traj17-201ENSMUST00000103724 63 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trim28Q62318 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim28Q62318 Gm11970-201ENSMUST00000116105 320 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 Gm11387-201ENSMUST00000120266 772 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 Gm22819-201ENSMUST00000157445 303 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 Gm26194-201ENSMUST00000175036 71 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 Gm20657-201ENSMUST00000177079 515 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 Gm4842-201ENSMUST00000183237 835 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 Il6st-202ENSMUST00000183513 201 ntTSL 5 BASIC6.19□□□□□ -1.42
Trim28Q62318 Gm27564-201ENSMUST00000185196 96 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 1700007K09Rik-202ENSMUST00000188899 680 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim28Q62318 Gm28389-201ENSMUST00000190090 697 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 Ralyl-205ENSMUST00000192209 662 ntTSL 3 BASIC6.19□□□□□ -1.42
Trim28Q62318 Gm37386-201ENSMUST00000194755 72 ntTSL 5 BASIC6.19□□□□□ -1.42
Trim28Q62318 Gm37836-201ENSMUST00000195875 175 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 AC136146.1-201ENSMUST00000196180 91 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC6.19□□□□□ -1.42
Trim28Q62318 Gm44234-201ENSMUST00000204246 900 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 Gm33626-201ENSMUST00000206790 828 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 Gm45651-201ENSMUST00000210857 335 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 AC107808.2-201ENSMUST00000213542 1027 ntTSL 5 BASIC6.19□□□□□ -1.42
Trim28Q62318 Olfr991-ps1-201ENSMUST00000215967 908 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 Gm3338-201ENSMUST00000220982 269 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 AC116589.3-202ENSMUST00000221770 649 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 AC116589.6-201ENSMUST00000222252 649 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 AC158511.1-201ENSMUST00000223622 764 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 AC117797.2-201ENSMUST00000224419 531 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 Mucl2-202ENSMUST00000226584 823 ntAPPRIS ALT2 BASIC6.19□□□□□ -1.42
Trim28Q62318 Ear-ps9-202ENSMUST00000226796 245 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 AC110380.1-201ENSMUST00000226987 389 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC6.19□□□□□ -1.42
Trim28Q62318 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trim28Q62318 Olfr178-201ENSMUST00000058564 960 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trim28Q62318 Apoo-ps-201ENSMUST00000061241 586 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 Olfr802-201ENSMUST00000074713 939 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trim28Q62318 Olfr504-201ENSMUST00000075595 958 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trim28Q62318 H2al1o-201ENSMUST00000079952 509 ntAPPRIS P1 BASIC6.19□□□□□ -1.42
Trim28Q62318 Gm6065-201ENSMUST00000081336 492 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 Gm24623-201ENSMUST00000082616 194 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 Gm6043-201ENSMUST00000099961 492 ntBASIC6.19□□□□□ -1.42
Trim28Q62318 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC6.19□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms