Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sdc1P18828 Cubn-201ENSMUST00000091436 11262 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sdc1P18828 Ddx60-201ENSMUST00000070631 6535 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
Sdc1P18828 Olfr575-203ENSMUST00000216420 3500 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sdc1P18828 Olfr1143-202ENSMUST00000099852 2028 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sdc1P18828 Hdx-201ENSMUST00000038472 9385 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Sdc1P18828 Gm13340-201ENSMUST00000117219 1545 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 Gm26144-201ENSMUST00000104475 132 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 Gm14444-201ENSMUST00000109069 919 ntTSL 2 BASIC3.62□□□□□ -1.83
Sdc1P18828 Apoa2-203ENSMUST00000111320 470 ntAPPRIS P1 TSL 2 BASIC3.62□□□□□ -1.83
Sdc1P18828 Synj2bp-202ENSMUST00000114201 1121 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Sdc1P18828 Gm8757-201ENSMUST00000119660 372 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 Gm8051-201ENSMUST00000120464 466 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 Gm14926-201ENSMUST00000120650 508 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 Gm13460-201ENSMUST00000121274 353 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC3.62□□□□□ -1.83
Sdc1P18828 Gm23743-201ENSMUST00000157389 274 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 Gm22725-201ENSMUST00000158092 110 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 Gm22518-201ENSMUST00000158267 68 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 Gm16303-201ENSMUST00000161498 390 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC3.62□□□□□ -1.83
Sdc1P18828 Olfr102-201ENSMUST00000169373 1027 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Sdc1P18828 Galntl6-205ENSMUST00000188531 1056 ntTSL 5 BASIC3.62□□□□□ -1.83
Sdc1P18828 1700110C19Rik-202ENSMUST00000188715 717 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Sdc1P18828 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC3.62□□□□□ -1.83
Sdc1P18828 Gm37839-201ENSMUST00000192576 492 ntTSL 5 BASIC3.62□□□□□ -1.83
Sdc1P18828 Mir1892-201ENSMUST00000197752 80 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 Gm3970-201ENSMUST00000198001 334 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Sdc1P18828 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sdc1P18828 Gm33756-201ENSMUST00000211358 636 ntTSL 5 BASIC3.62□□□□□ -1.83
Sdc1P18828 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC3.62□□□□□ -1.83
Sdc1P18828 Gm29154-234ENSMUST00000215272 750 ntTSL 5 BASIC3.62□□□□□ -1.83
Sdc1P18828 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC3.62□□□□□ -1.83
Sdc1P18828 2310002D06Rik-201ENSMUST00000218103 508 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Sdc1P18828 AC153932.1-201ENSMUST00000218558 787 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 Gm35041-201ENSMUST00000219581 602 ntTSL 3 BASIC3.62□□□□□ -1.83
Sdc1P18828 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC3.62□□□□□ -1.83
Sdc1P18828 Elk3-205ENSMUST00000223340 750 ntTSL 5 BASIC3.62□□□□□ -1.83
Sdc1P18828 AC091783.4-201ENSMUST00000224940 611 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 AC124549.1-201ENSMUST00000225912 333 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 AC131029.2-201ENSMUST00000226696 628 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 Spink1-201ENSMUST00000025381 422 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sdc1P18828 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC3.62□□□□□ -1.83
Sdc1P18828 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Sdc1P18828 Vmn1r233-201ENSMUST00000056339 960 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
Sdc1P18828 Olfr358-202ENSMUST00000216437 4962 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Sdc1P18828 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Sdc1P18828 Gpr34-202ENSMUST00000096492 1898 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sdc1P18828 Gm42968-201ENSMUST00000198578 1372 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 Gm3089-201ENSMUST00000200804 1395 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 Gm3302-201ENSMUST00000201462 1395 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 Eif3s6-ps4-201ENSMUST00000202873 1388 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 Nap1l1-202ENSMUST00000171797 3926 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Sdc1P18828 Nap1l1-204ENSMUST00000218828 3934 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
Sdc1P18828 Gm37625-201ENSMUST00000194969 4872 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Dock11-202ENSMUST00000115264 1725 ntTSL 5 BASIC3.61□□□□□ -1.83
Sdc1P18828 4921515E04Rik-202ENSMUST00000226383 1738 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC3.61□□□□□ -1.83
Sdc1P18828 Gm3623-201ENSMUST00000173643 2747 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Olfr916-203ENSMUST00000214093 3685 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Sdc1P18828 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Olfr615-202ENSMUST00000214345 3403 ntAPPRIS P1 TSL 5 BASIC3.61□□□□□ -1.83
Sdc1P18828 Olfr1440-208ENSMUST00000217062 7484 ntAPPRIS P1 TSL 2 BASIC3.61□□□□□ -1.83
Sdc1P18828 Gm26376-201ENSMUST00000104784 110 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC3.61□□□□□ -1.83
Sdc1P18828 B4galt4-202ENSMUST00000114708 734 ntTSL 2 BASIC3.61□□□□□ -1.83
Sdc1P18828 Gm13785-201ENSMUST00000119099 690 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Gm9078-201ENSMUST00000119126 617 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Gm5384-201ENSMUST00000120313 463 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Gm13865-201ENSMUST00000120957 865 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Gm14986-201ENSMUST00000121262 1002 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Gm24940-201ENSMUST00000158326 108 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Gm26169-201ENSMUST00000158420 135 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Gm23385-201ENSMUST00000158592 295 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 AC122858.3-202ENSMUST00000161721 433 ntTSL 5 BASIC3.61□□□□□ -1.83
Sdc1P18828 Mir7046-201ENSMUST00000183435 66 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Mir6938-201ENSMUST00000184173 63 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Gm6693-201ENSMUST00000189583 813 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Gm38330-201ENSMUST00000192743 959 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Gm37421-201ENSMUST00000193088 132 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 A330074H02Rik-201ENSMUST00000194667 1039 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Igkv3-8-201ENSMUST00000197635 339 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Gm44054-201ENSMUST00000203814 372 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Gm4763-202ENSMUST00000205376 807 ntTSL 3 BASIC3.61□□□□□ -1.83
Sdc1P18828 Olfr369-ps1-201ENSMUST00000212589 836 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC3.61□□□□□ -1.83
Sdc1P18828 A330049N07Rik-202ENSMUST00000219920 587 ntTSL 5 BASIC3.61□□□□□ -1.83
Sdc1P18828 AC134254.2-201ENSMUST00000221262 170 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Gm9269-201ENSMUST00000221661 578 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.61□□□□□ -1.83
Sdc1P18828 AC122858.1-201ENSMUST00000226212 433 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 AC122858.3-201ENSMUST00000226341 740 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 AC139294.2-201ENSMUST00000227159 285 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 AC116596.2-203ENSMUST00000227345 731 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Rnase12-202ENSMUST00000227764 673 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sdc1P18828 AC122858.1-202ENSMUST00000228290 986 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 AC120375.2-202ENSMUST00000228722 397 ntBASIC3.61□□□□□ -1.83
Sdc1P18828 Olfr211-201ENSMUST00000065786 930 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Sdc1P18828 Dynlrb2-201ENSMUST00000078170 515 ntAPPRIS P1 TSL 1 (best) BASIC3.61□□□□□ -1.83
Sdc1P18828 Olfr1301-201ENSMUST00000080094 939 ntAPPRIS P1 BASIC3.61□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 71.9 ms