Protein–RNA interactions for Protein: P01849

Tcra, T-cell receptor alpha chain C region, mousemouse

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TcraP01849 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC3.18□□□□□ -1.9
TcraP01849 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC3.18□□□□□ -1.9
TcraP01849 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC3.18□□□□□ -1.9
TcraP01849 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC3.18□□□□□ -1.9
TcraP01849 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC3.18□□□□□ -1.9
TcraP01849 4931408C20Rik-201ENSMUST00000097801 4318 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TcraP01849 Vmn1r89-202ENSMUST00000226717 4120 ntAPPRIS P2 BASIC3.18□□□□□ -1.9
TcraP01849 Gm22370-201ENSMUST00000102422 83 ntBASIC3.18□□□□□ -1.9
TcraP01849 Igkv3-2-201ENSMUST00000103403 378 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TcraP01849 Gm25919-201ENSMUST00000104271 132 ntBASIC3.18□□□□□ -1.9
TcraP01849 Gm23322-201ENSMUST00000104464 167 ntBASIC3.18□□□□□ -1.9
TcraP01849 Mir105-201ENSMUST00000104655 80 ntBASIC3.18□□□□□ -1.9
TcraP01849 Sult1b1-203ENSMUST00000120150 1213 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TcraP01849 Hmgb1-ps5-201ENSMUST00000121058 557 ntBASIC3.18□□□□□ -1.9
TcraP01849 Gm14559-201ENSMUST00000121745 496 ntBASIC3.18□□□□□ -1.9
TcraP01849 Gm5123-201ENSMUST00000121905 837 ntBASIC3.18□□□□□ -1.9
TcraP01849 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC3.18□□□□□ -1.9
TcraP01849 Gm16345-201ENSMUST00000146065 158 ntBASIC3.18□□□□□ -1.9
TcraP01849 Gm5755-201ENSMUST00000152394 837 ntBASIC3.18□□□□□ -1.9
TcraP01849 Gm26352-201ENSMUST00000158223 125 ntBASIC3.18□□□□□ -1.9
TcraP01849 Gm23046-201ENSMUST00000158369 284 ntBASIC3.18□□□□□ -1.9
TcraP01849 Gm16213-201ENSMUST00000160076 639 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TcraP01849 Gm16243-201ENSMUST00000160351 494 ntTSL 3 BASIC3.18□□□□□ -1.9
TcraP01849 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC3.18□□□□□ -1.9
TcraP01849 Prl5a1-201ENSMUST00000017208 1061 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TcraP01849 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC3.18□□□□□ -1.9
TcraP01849 Vmn2r-ps134-201ENSMUST00000176907 1046 ntBASIC3.18□□□□□ -1.9
TcraP01849 Gm27864-201ENSMUST00000183704 190 ntBASIC3.18□□□□□ -1.9
TcraP01849 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC3.18□□□□□ -1.9
TcraP01849 Gm28426-201ENSMUST00000187385 620 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TcraP01849 Gm21735-201ENSMUST00000190360 696 ntBASIC3.18□□□□□ -1.9
TcraP01849 Gm29038-201ENSMUST00000191543 678 ntBASIC3.18□□□□□ -1.9
TcraP01849 Gm37996-201ENSMUST00000191859 367 ntBASIC3.18□□□□□ -1.9
TcraP01849 Ighv1-3-201ENSMUST00000192764 302 ntBASIC3.18□□□□□ -1.9
TcraP01849 Igkv12-66-201ENSMUST00000199305 348 ntBASIC3.18□□□□□ -1.9
TcraP01849 Gm43449-201ENSMUST00000202955 371 ntTSL 3 BASIC3.18□□□□□ -1.9
TcraP01849 A530053G22Rik-203ENSMUST00000204370 612 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TcraP01849 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC3.18□□□□□ -1.9
TcraP01849 Gm29674-201ENSMUST00000218791 1139 ntTSL 5 BASIC3.18□□□□□ -1.9
TcraP01849 AC164629.3-201ENSMUST00000219325 611 ntTSL 5 BASIC3.18□□□□□ -1.9
TcraP01849 AC153361.1-201ENSMUST00000219679 247 ntBASIC3.18□□□□□ -1.9
TcraP01849 Gm40692-201ENSMUST00000220411 491 ntBASIC3.18□□□□□ -1.9
TcraP01849 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC3.18□□□□□ -1.9
TcraP01849 AC168881.1-201ENSMUST00000226018 430 ntBASIC3.18□□□□□ -1.9
TcraP01849 AC154657.1-201ENSMUST00000226394 775 ntBASIC3.18□□□□□ -1.9
TcraP01849 AC158142.1-201ENSMUST00000226721 416 ntBASIC3.18□□□□□ -1.9
TcraP01849 AC125539.2-201ENSMUST00000228339 753 ntBASIC3.18□□□□□ -1.9
TcraP01849 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TcraP01849 Klk1b7-ps-201ENSMUST00000078897 448 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TcraP01849 Gm23510-201ENSMUST00000083083 163 ntBASIC3.18□□□□□ -1.9
TcraP01849 BC028528-202ENSMUST00000090476 809 ntAPPRIS P3 TSL 2 BASIC3.18□□□□□ -1.9
TcraP01849 2410024N13Rik-201ENSMUST00000090704 669 ntBASIC3.18□□□□□ -1.9
TcraP01849 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TcraP01849 Olfr1154-201ENSMUST00000099844 933 ntAPPRIS P1 BASIC3.18□□□□□ -1.9
TcraP01849 Gm38260-201ENSMUST00000193573 3995 ntBASIC3.18□□□□□ -1.9
TcraP01849 Gm37045-201ENSMUST00000192016 2463 ntBASIC3.18□□□□□ -1.9
TcraP01849 Olfr1082-201ENSMUST00000215600 1620 ntAPPRIS P1 TSL 3 BASIC3.18□□□□□ -1.9
TcraP01849 Neb-203ENSMUST00000075301 21456 ntAPPRIS ALT2 TSL 5 BASIC3.18□□□□□ -1.9
TcraP01849 Cfh-203ENSMUST00000111977 4100 ntAPPRIS ALT2 TSL 1 (best) BASIC3.18□□□□□ -1.9
TcraP01849 Olfr303-205ENSMUST00000216409 4106 ntAPPRIS P1 TSL 5 BASIC3.18□□□□□ -1.9
TcraP01849 Klri2-201ENSMUST00000050385 3913 ntAPPRIS P1 TSL 1 (best) BASIC3.18□□□□□ -1.9
TcraP01849 Srek1-204ENSMUST00000210489 6330 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TcraP01849 Zfp101-204ENSMUST00000174512 3743 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TcraP01849 Gm15773-201ENSMUST00000118665 1448 ntBASIC3.18□□□□□ -1.9
TcraP01849 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC3.18□□□□□ -1.9
TcraP01849 Vmn1r62-201ENSMUST00000173956 1757 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TcraP01849 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.17□□□□□ -1.9
TcraP01849 Vmn1r45-205ENSMUST00000227571 2757 ntBASIC3.17□□□□□ -1.9
TcraP01849 Olfr1016-202ENSMUST00000216425 2698 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
TcraP01849 Pde1a-205ENSMUST00000102654 4122 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
TcraP01849 Gm38152-201ENSMUST00000195389 3566 ntBASIC3.17□□□□□ -1.9
TcraP01849 Olfr728-202ENSMUST00000213685 7087 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
TcraP01849 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.17□□□□□ -1.9
TcraP01849 Gm36969-201ENSMUST00000194551 2809 ntBASIC3.17□□□□□ -1.9
TcraP01849 Olfr1026-203ENSMUST00000219615 1465 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
TcraP01849 AC147615.2-201ENSMUST00000219876 2154 ntBASIC3.17□□□□□ -1.9
TcraP01849 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TcraP01849 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TcraP01849 Olfr1270-206ENSMUST00000217139 4803 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
TcraP01849 Arpp19-203ENSMUST00000166549 1747 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TcraP01849 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC3.17□□□□□ -1.9
TcraP01849 Olfr1146-ps1-201ENSMUST00000117180 943 ntBASIC3.17□□□□□ -1.9
TcraP01849 Gm8145-201ENSMUST00000118220 745 ntBASIC3.17□□□□□ -1.9
TcraP01849 Gm11260-201ENSMUST00000121163 942 ntBASIC3.17□□□□□ -1.9
TcraP01849 Gm13419-201ENSMUST00000121711 271 ntBASIC3.17□□□□□ -1.9
TcraP01849 Gm25179-201ENSMUST00000122632 128 ntBASIC3.17□□□□□ -1.9
TcraP01849 Gm12854-201ENSMUST00000128518 297 ntBASIC3.17□□□□□ -1.9
TcraP01849 Gm10059-201ENSMUST00000131139 171 ntBASIC3.17□□□□□ -1.9
TcraP01849 Gm22158-201ENSMUST00000158411 126 ntBASIC3.17□□□□□ -1.9
TcraP01849 1700058P15Rik-201ENSMUST00000159981 413 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
TcraP01849 Olfr296-ps1-201ENSMUST00000173904 1102 ntAPPRIS P1 TSL 5 BASIC3.17□□□□□ -1.9
TcraP01849 Gm27543-201ENSMUST00000183562 177 ntBASIC3.17□□□□□ -1.9
TcraP01849 Mir6911-201ENSMUST00000184241 69 ntBASIC3.17□□□□□ -1.9
TcraP01849 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC3.17□□□□□ -1.9
TcraP01849 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC3.17□□□□□ -1.9
TcraP01849 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.17□□□□□ -1.9
TcraP01849 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC3.17□□□□□ -1.9
TcraP01849 Gm6057-201ENSMUST00000195927 314 ntBASIC3.17□□□□□ -1.9
TcraP01849 Gm43476-201ENSMUST00000197873 405 ntBASIC3.17□□□□□ -1.9
TcraP01849 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC3.17□□□□□ -1.9
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms