Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 Rps26-ps1-202ENSMUST00000212102 351 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 AC132384.6-201ENSMUST00000218976 1206 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm6474-201ENSMUST00000223250 699 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 CT025598.1-201ENSMUST00000225140 427 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 CT009711.3-201ENSMUST00000225882 250 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 AC134864.1-201ENSMUST00000226326 511 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Muc16-201ENSMUST00000034653 1035 ntTSL 2 BASIC3.45□□□□□ -1.86
Hmgb3O54879 Etd-201ENSMUST00000074232 478 ntAPPRIS P1 TSL 2 BASIC3.45□□□□□ -1.86
Hmgb3O54879 Olfr482-201ENSMUST00000081184 972 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Hmgb3O54879 Gm22423-201ENSMUST00000082861 184 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 1700010D01Rik-201ENSMUST00000096366 507 ntTSL 1 (best) BASIC3.45□□□□□ -1.86
Hmgb3O54879 Olfr654-201ENSMUST00000098173 1155 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Olfr1197-201ENSMUST00000099815 945 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Hmgb3O54879 Olfr213-202ENSMUST00000220008 4020 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Hmgb3O54879 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 AC153959.1-201ENSMUST00000213617 1694 ntBASIC3.45□□□□□ -1.86
Hmgb3O54879 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC3.45□□□□□ -1.86
Hmgb3O54879 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Hmgb3O54879 Olfr1197-202ENSMUST00000213118 2899 ntAPPRIS P1 TSL 5 BASIC3.45□□□□□ -1.86
Hmgb3O54879 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC3.45□□□□□ -1.86
Hmgb3O54879 Cp-205ENSMUST00000108329 4564 ntAPPRIS ALT2 TSL 5 BASIC3.44□□□□□ -1.86
Hmgb3O54879 Gprc6a-203ENSMUST00000219286 2574 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Hmgb3O54879 Dach2-202ENSMUST00000113378 2089 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Hmgb3O54879 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC3.44□□□□□ -1.86
Hmgb3O54879 Olfr215-201ENSMUST00000061723 4112 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm23424-201ENSMUST00000103889 110 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Olfr1196-201ENSMUST00000104892 945 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm13213-201ENSMUST00000119668 474 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Klra11-ps-201ENSMUST00000122033 810 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm25179-201ENSMUST00000122632 128 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm6969-201ENSMUST00000140065 342 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm4487-201ENSMUST00000150617 442 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm13617-201ENSMUST00000155350 675 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm23585-201ENSMUST00000157656 102 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Airn-203ENSMUST00000159791 485 ntTSL 3 BASIC3.44□□□□□ -1.86
Hmgb3O54879 Rpl9-ps9-201ENSMUST00000173020 573 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm23638-201ENSMUST00000175073 126 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm23158-201ENSMUST00000175076 126 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm22907-201ENSMUST00000175198 126 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Mir3097-201ENSMUST00000175356 67 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm22625-201ENSMUST00000175382 126 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm22875-201ENSMUST00000175449 126 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm25197-201ENSMUST00000175516 126 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm27857-201ENSMUST00000176930 126 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm26268-201ENSMUST00000177685 126 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Obox4-ps15-201ENSMUST00000178057 1140 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Obox4-ps19-201ENSMUST00000178284 1140 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm23681-201ENSMUST00000178821 126 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Obox4-ps20-201ENSMUST00000179591 1140 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Obox4-ps21-201ENSMUST00000179856 1140 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm27543-201ENSMUST00000183562 177 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Lockd-204ENSMUST00000184991 243 ntTSL 5 BASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm8480-201ENSMUST00000190350 698 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm29332-201ENSMUST00000190829 227 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm8861-201ENSMUST00000196346 832 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm42983-201ENSMUST00000199879 815 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm45007-201ENSMUST00000206237 366 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Hddc3-209ENSMUST00000206480 454 ntTSL 2 BASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm45411-201ENSMUST00000209647 345 ntTSL 5 BASIC3.44□□□□□ -1.86
Hmgb3O54879 Olfr574-202ENSMUST00000211329 1039 ntAPPRIS ALT2 BASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm46190-201ENSMUST00000219650 427 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 AC159244.1-201ENSMUST00000220964 594 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm30198-201ENSMUST00000222873 824 ntTSL 2 BASIC3.44□□□□□ -1.86
Hmgb3O54879 AC152169.2-201ENSMUST00000224558 613 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 AC165260.3-201ENSMUST00000225101 665 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 AC124549.1-201ENSMUST00000225912 333 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm6563-201ENSMUST00000056396 869 ntAPPRIS P1 BASIC3.44□□□□□ -1.86
Hmgb3O54879 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Hmgb3O54879 Olfr881-201ENSMUST00000074611 948 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC3.44□□□□□ -1.86
Hmgb3O54879 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC3.44□□□□□ -1.86
Hmgb3O54879 Olfr1356-202ENSMUST00000205100 3023 ntAPPRIS P1 TSL 2 BASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Hmgb3O54879 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC3.44□□□□□ -1.86
Hmgb3O54879 Nlrp4c-201ENSMUST00000037728 3615 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Hmgb3O54879 Zbtb37-203ENSMUST00000162226 18814 ntAPPRIS P1 TSL 1 (best) BASIC3.44□□□□□ -1.86
Hmgb3O54879 Elf1-202ENSMUST00000110835 3888 ntAPPRIS P2 TSL 1 (best) BASIC3.44□□□□□ -1.86
Hmgb3O54879 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Hmgb3O54879 AC174797.3-203ENSMUST00000225749 2078 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC3.43□□□□□ -1.86
Hmgb3O54879 Olfr118-203ENSMUST00000216551 1772 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm45483-201ENSMUST00000209845 1682 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC3.43□□□□□ -1.86
Hmgb3O54879 Olfr592-202ENSMUST00000106893 6566 ntAPPRIS P1 TSL 5 BASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm23063-201ENSMUST00000102350 93 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Mir147-201ENSMUST00000102354 79 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm24067-201ENSMUST00000104514 85 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm13664-201ENSMUST00000117304 345 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm12067-201ENSMUST00000119755 1148 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm6565-201ENSMUST00000121217 438 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm11882-201ENSMUST00000121463 506 ntBASIC3.43□□□□□ -1.86
Hmgb3O54879 Gm24383-201ENSMUST00000122691 333 ntBASIC3.43□□□□□ -1.86
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms