Protein–RNA interactions for Protein: Q99N13

Hdac9, Histone deacetylase 9, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac9Q99N13 Gm23099-201ENSMUST00000083454 139 ntBASIC5.55□□□□□ -1.52
Hdac9Q99N13 Zfp967-202ENSMUST00000178443 1458 ntAPPRIS P1 TSL 2 BASIC5.55□□□□□ -1.52
Hdac9Q99N13 Zfp969-203ENSMUST00000179061 1458 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Hdac9Q99N13 Chl1-203ENSMUST00000203830 4152 ntAPPRIS P2 TSL 1 (best) BASIC5.55□□□□□ -1.52
Hdac9Q99N13 Gm37930-201ENSMUST00000194308 1886 ntBASIC5.55□□□□□ -1.52
Hdac9Q99N13 Steap2-209ENSMUST00000164219 10089 ntAPPRIS P1 TSL 3 BASIC5.55□□□□□ -1.52
Hdac9Q99N13 Gm38020-201ENSMUST00000193066 4676 ntBASIC5.55□□□□□ -1.52
Hdac9Q99N13 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.55□□□□□ -1.52
Hdac9Q99N13 Gm43266-201ENSMUST00000201049 1771 ntBASIC5.55□□□□□ -1.52
Hdac9Q99N13 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Hdac9Q99N13 Gm10997-201ENSMUST00000210294 1500 ntBASIC5.54□□□□□ -1.52
Hdac9Q99N13 Gm43216-201ENSMUST00000196295 1333 ntBASIC5.54□□□□□ -1.52
Hdac9Q99N13 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC5.54□□□□□ -1.52
Hdac9Q99N13 Elmod1-202ENSMUST00000166580 2243 ntAPPRIS ALT1 TSL 5 BASIC5.54□□□□□ -1.52
Hdac9Q99N13 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Hdac9Q99N13 Vmn1r171-208ENSMUST00000227866 2566 ntAPPRIS ALT2 BASIC5.54□□□□□ -1.52
Hdac9Q99N13 Gm44027-201ENSMUST00000203419 3480 ntBASIC5.54□□□□□ -1.52
Hdac9Q99N13 Amd-ps1-201ENSMUST00000120127 994 ntBASIC5.54□□□□□ -1.52
Hdac9Q99N13 Gm12893-201ENSMUST00000121732 275 ntBASIC5.54□□□□□ -1.52
Hdac9Q99N13 Gm14435-202ENSMUST00000127687 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hdac9Q99N13 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC5.54□□□□□ -1.52
Hdac9Q99N13 Gm13371-201ENSMUST00000137756 469 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Hdac9Q99N13 Gm25150-201ENSMUST00000157121 60 ntBASIC5.54□□□□□ -1.52
Hdac9Q99N13 Vmn1r173-201ENSMUST00000174055 942 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Hdac9Q99N13 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Hdac9Q99N13 Gm28438-201ENSMUST00000188299 345 ntBASIC5.54□□□□□ -1.52
Hdac9Q99N13 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.54□□□□□ -1.52
Hdac9Q99N13 Gm37900-201ENSMUST00000195510 3805 ntBASIC5.54□□□□□ -1.52
Hdac9Q99N13 Gm45004-201ENSMUST00000205302 465 ntTSL 2 BASIC5.54□□□□□ -1.52
Hdac9Q99N13 Gm44665-201ENSMUST00000205381 251 ntBASIC5.54□□□□□ -1.52
Hdac9Q99N13 Gm21885-202ENSMUST00000208510 775 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Hdac9Q99N13 Vmn1r85-202ENSMUST00000209822 1251 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Hdac9Q99N13 AC167250.1-202ENSMUST00000213629 672 ntTSL 3 BASIC5.54□□□□□ -1.52
Hdac9Q99N13 AC122901.2-201ENSMUST00000216926 285 ntBASIC5.54□□□□□ -1.52
Hdac9Q99N13 AC153801.1-201ENSMUST00000217904 947 ntBASIC5.54□□□□□ -1.52
Hdac9Q99N13 AC151907.1-201ENSMUST00000228812 412 ntBASIC5.54□□□□□ -1.52
Hdac9Q99N13 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hdac9Q99N13 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hdac9Q99N13 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.52
Hdac9Q99N13 Scn7a-201ENSMUST00000042792 7338 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hdac9Q99N13 Cfhr1-201ENSMUST00000023965 1793 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Hdac9Q99N13 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Hdac9Q99N13 Gm29488-201ENSMUST00000191427 2402 ntBASIC5.54□□□□□ -1.52
Hdac9Q99N13 Olfr965-203ENSMUST00000215164 1722 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Hdac9Q99N13 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Hdac9Q99N13 Olfr870-202ENSMUST00000215984 4091 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Olfr1057-202ENSMUST00000217435 3249 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Olfr1382-202ENSMUST00000213152 4236 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Hdac9Q99N13 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm37776-201ENSMUST00000193471 2497 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm42869-201ENSMUST00000199953 2121 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm26760-201ENSMUST00000181901 1604 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Zfp119b-202ENSMUST00000189452 2078 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm10375-201ENSMUST00000100692 836 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm23481-201ENSMUST00000104173 131 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Slamf7-201ENSMUST00000111276 1082 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm15603-201ENSMUST00000119252 492 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm12577-201ENSMUST00000119701 574 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm13677-201ENSMUST00000120739 595 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm22613-201ENSMUST00000122679 292 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm26490-201ENSMUST00000157879 140 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm24905-201ENSMUST00000158129 104 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm22637-201ENSMUST00000158144 283 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm26362-201ENSMUST00000158865 315 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm3173-203ENSMUST00000166848 396 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Defa27-202ENSMUST00000168340 371 ntTSL 5 BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Samd15-201ENSMUST00000169669 1194 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Vmn1r-ps79-201ENSMUST00000173508 963 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Vmn1r-ps70-201ENSMUST00000173675 963 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Mir3473c-201ENSMUST00000175262 81 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Vmn1r-ps19-201ENSMUST00000177008 926 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 1700001F09Rik-201ENSMUST00000178178 884 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm27864-201ENSMUST00000183704 190 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm27883-201ENSMUST00000183941 102 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 A930005H10Rik-202ENSMUST00000185424 433 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm42516-201ENSMUST00000198691 767 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm44820-201ENSMUST00000207420 396 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm45499-201ENSMUST00000211656 280 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 AC134254.4-201ENSMUST00000223086 370 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 AC154592.1-201ENSMUST00000225784 574 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 AC161453.1-201ENSMUST00000226078 884 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Olfr99-201ENSMUST00000077585 918 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm23928-201ENSMUST00000082469 145 ntBASIC5.53□□□□□ -1.52
Hdac9Q99N13 Olfr1053-201ENSMUST00000099897 942 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gm38407-202ENSMUST00000219221 2391 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Cyp4a31-201ENSMUST00000030480 2396 ntTSL 2 BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Cnot7-203ENSMUST00000132032 2542 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Gabra6-202ENSMUST00000109286 1554 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Hdac9Q99N13 Zscan4f-202ENSMUST00000145237 1829 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 73.7 ms