Protein–RNA interactions for Protein: Q8CEC0

Nup88, Nuclear pore complex protein Nup88, mousemouse

Known RBP Predictions only

Length 753 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88Q8CEC0 Gm21850-201ENSMUST00000179792 359 ntBASIC5.35□□□□□ -1.55
Nup88Q8CEC0 Gm29443-202ENSMUST00000190297 410 ntTSL 3 BASIC5.35□□□□□ -1.55
Nup88Q8CEC0 Gm37088-201ENSMUST00000193887 406 ntBASIC5.35□□□□□ -1.55
Nup88Q8CEC0 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.35□□□□□ -1.55
Nup88Q8CEC0 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.35□□□□□ -1.55
Nup88Q8CEC0 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Nup88Q8CEC0 Gm8748-201ENSMUST00000211125 587 ntBASIC5.35□□□□□ -1.55
Nup88Q8CEC0 4930558N11Rik-203ENSMUST00000211456 1180 ntTSL 5 BASIC5.35□□□□□ -1.55
Nup88Q8CEC0 Gm32281-202ENSMUST00000217220 691 ntTSL 3 BASIC5.35□□□□□ -1.55
Nup88Q8CEC0 Gm33958-201ENSMUST00000222879 450 ntTSL 5 BASIC5.35□□□□□ -1.55
Nup88Q8CEC0 AC192088.2-201ENSMUST00000227590 411 ntBASIC5.35□□□□□ -1.55
Nup88Q8CEC0 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Nup88Q8CEC0 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nup88Q8CEC0 Tas2r140-201ENSMUST00000095391 1000 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Nup88Q8CEC0 Herc2-201ENSMUST00000076226 15250 ntAPPRIS P2 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nup88Q8CEC0 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
Nup88Q8CEC0 Scfd1-201ENSMUST00000021335 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Nup88Q8CEC0 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Nup88Q8CEC0 Olfr376-203ENSMUST00000170592 3211 ntAPPRIS P3 TSL 2 BASIC5.35□□□□□ -1.55
Nup88Q8CEC0 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Gm37814-201ENSMUST00000195820 3644 ntBASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nup88Q8CEC0 AC131068.3-201ENSMUST00000228438 1456 ntBASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Zfp708-203ENSMUST00000190566 2406 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Mir92b-201ENSMUST00000102300 83 ntBASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Olfr475-ps1-201ENSMUST00000117982 932 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Gm14172-201ENSMUST00000118255 644 ntBASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Gm11349-201ENSMUST00000122209 1116 ntBASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Prol1-201ENSMUST00000170832 1163 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Vmn1r143-201ENSMUST00000171622 924 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Gm6155-201ENSMUST00000173735 341 ntBASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Gm29196-201ENSMUST00000189239 618 ntBASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Gm37881-201ENSMUST00000193001 421 ntBASIC5.34□□□□□ -1.55
Nup88Q8CEC0 A730082K24Rik-201ENSMUST00000205365 465 ntTSL 3 BASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Gm45086-201ENSMUST00000209052 462 ntTSL 5 BASIC5.34□□□□□ -1.55
Nup88Q8CEC0 4930567H12Rik-204ENSMUST00000213085 801 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Nup88Q8CEC0 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Olfr586-202ENSMUST00000211075 4562 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Olfr690-202ENSMUST00000211006 2048 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Nup88Q8CEC0 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC5.34□□□□□ -1.56
Nup88Q8CEC0 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
Nup88Q8CEC0 Olfr1188-202ENSMUST00000217131 1406 ntAPPRIS ALT2 TSL 3 BASIC5.33□□□□□ -1.56
Nup88Q8CEC0 AC154329.1-201ENSMUST00000224408 3129 ntBASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Slfn8-203ENSMUST00000108152 3083 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Olfr726-206ENSMUST00000217025 1363 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Vmn1r39-207ENSMUST00000228862 2398 ntAPPRIS P2 BASIC5.33□□□□□ -1.56
Nup88Q8CEC0 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Olfr359-ps1-201ENSMUST00000115977 926 ntBASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Anp32-ps-201ENSMUST00000118265 388 ntBASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Gm12231-201ENSMUST00000119447 695 ntBASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Gm12978-201ENSMUST00000121250 522 ntBASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Mup-ps15-201ENSMUST00000121741 539 ntBASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Tex50-201ENSMUST00000135643 1192 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Gm24251-201ENSMUST00000157324 114 ntBASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Gm24854-201ENSMUST00000158025 98 ntBASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Rab26os-201ENSMUST00000176215 477 ntBASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Mir6391-201ENSMUST00000184391 104 ntBASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Gm3434-202ENSMUST00000184421 521 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Gm37682-201ENSMUST00000191776 522 ntBASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Gm36971-201ENSMUST00000195244 378 ntTSL 5 BASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Gm42458-201ENSMUST00000201914 369 ntBASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Gm45209-201ENSMUST00000207122 353 ntBASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.33□□□□□ -1.56
Nup88Q8CEC0 AC158523.2-201ENSMUST00000222708 548 ntBASIC5.33□□□□□ -1.56
Nup88Q8CEC0 n-R5s152-201ENSMUST00000093641 119 ntBASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Olfr1056-201ENSMUST00000099893 1079 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Vmn2r21-201ENSMUST00000163607 2562 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Vmn2r20-201ENSMUST00000172199 2562 ntAPPRIS P1 TSL 5 BASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Pign-205ENSMUST00000186485 6759 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Gm43668-201ENSMUST00000197014 5342 ntBASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Olfr951-202ENSMUST00000216107 1947 ntAPPRIS ALT2 TSL 3 BASIC5.33□□□□□ -1.56
Nup88Q8CEC0 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Vmn1r34-204ENSMUST00000226999 3048 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 B3galt1-202ENSMUST00000112346 4977 ntAPPRIS P1 BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Olfr556-203ENSMUST00000217526 3741 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Esp3-201ENSMUST00000177574 1316 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Gm37397-201ENSMUST00000194579 2842 ntBASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Sult1d1-201ENSMUST00000113314 2420 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Gm22789-201ENSMUST00000157884 130 ntBASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Gm25447-201ENSMUST00000158997 128 ntBASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Gm22395-201ENSMUST00000177427 96 ntBASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Gm21693-201ENSMUST00000178531 1143 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Gm21677-201ENSMUST00000179508 1143 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Gm3376-201ENSMUST00000180202 1143 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Gm21708-201ENSMUST00000180310 1143 ntAPPRIS P1 TSL 5 BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Mir6975-201ENSMUST00000184879 61 ntBASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Skint2-204ENSMUST00000186969 1258 ntAPPRIS P2 TSL 1 (best) BASIC5.32□□□□□ -1.56
Nup88Q8CEC0 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 76,532 protein–RNA pairs in 57.4 ms