Protein–RNA interactions for Protein: Q8C006

Trim35, Tripartite motif-containing protein 35, mousemouse

Predictions only

Length 501 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim35Q8C006 Gm23260-201ENSMUST00000158317 172 ntBASIC7.71□□□□□ -1.18
Trim35Q8C006 Gm26455-201ENSMUST00000175300 92 ntBASIC7.71□□□□□ -1.18
Trim35Q8C006 Mir3072-201ENSMUST00000175610 83 ntBASIC7.71□□□□□ -1.18
Trim35Q8C006 Gm28978-201ENSMUST00000191120 615 ntBASIC7.71□□□□□ -1.18
Trim35Q8C006 Gm37392-201ENSMUST00000192098 516 ntBASIC7.71□□□□□ -1.18
Trim35Q8C006 Gm38087-201ENSMUST00000193653 265 ntTSL 5 BASIC7.71□□□□□ -1.18
Trim35Q8C006 Gm32158-201ENSMUST00000200135 404 ntBASIC7.71□□□□□ -1.18
Trim35Q8C006 Gm42844-201ENSMUST00000200355 112 ntBASIC7.71□□□□□ -1.18
Trim35Q8C006 Gm44446-201ENSMUST00000204864 255 ntBASIC7.71□□□□□ -1.18
Trim35Q8C006 Gm44984-201ENSMUST00000207802 394 ntBASIC7.71□□□□□ -1.18
Trim35Q8C006 AC126440.1-201ENSMUST00000227098 349 ntBASIC7.71□□□□□ -1.18
Trim35Q8C006 S100g-201ENSMUST00000038769 480 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim35Q8C006 Trex1-201ENSMUST00000061973 1084 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim35Q8C006 Gm25259-201ENSMUST00000083048 193 ntBASIC7.71□□□□□ -1.18
Trim35Q8C006 Gm5670-201ENSMUST00000093546 372 ntBASIC7.71□□□□□ -1.18
Trim35Q8C006 Gm10521-201ENSMUST00000097466 2574 ntAPPRIS P1 BASIC7.71□□□□□ -1.18
Trim35Q8C006 Clca3a2-201ENSMUST00000029929 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim35Q8C006 Gm43826-201ENSMUST00000199604 2612 ntBASIC7.71□□□□□ -1.18
Trim35Q8C006 Gm37326-201ENSMUST00000192828 3071 ntBASIC7.71□□□□□ -1.18
Trim35Q8C006 D930007P13Rik-201ENSMUST00000181306 1324 ntTSL 1 (best) BASIC7.71□□□□□ -1.18
Trim35Q8C006 Luzp1-202ENSMUST00000063021 3775 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim35Q8C006 Strbp-202ENSMUST00000072186 3144 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim35Q8C006 Scn3b-203ENSMUST00000171835 4024 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim35Q8C006 Olfr1115-203ENSMUST00000214119 2455 ntAPPRIS P1 TSL 5 BASIC7.71□□□□□ -1.18
Trim35Q8C006 Exoc1-202ENSMUST00000087133 3371 ntAPPRIS P4 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim35Q8C006 Luzp1-201ENSMUST00000001116 7246 ntAPPRIS P1 TSL 1 (best) BASIC7.71□□□□□ -1.18
Trim35Q8C006 Smarca2-246ENSMUST00000209085 1841 ntTSL 5 BASIC7.71□□□□□ -1.18
Trim35Q8C006 Nav3-201ENSMUST00000032719 9962 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Trim35Q8C006 4930428E07Rik-202ENSMUST00000222922 3799 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trim35Q8C006 2010110K18Rik-201ENSMUST00000181453 2400 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trim35Q8C006 Grik1-209ENSMUST00000227986 2942 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Gucy2g-201ENSMUST00000069183 3690 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim35Q8C006 Itk-201ENSMUST00000020664 4272 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim35Q8C006 Fbxw11-201ENSMUST00000076383 4019 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trim35Q8C006 Mnat1-201ENSMUST00000021523 2505 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim35Q8C006 Scd1-201ENSMUST00000041331 4836 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm18701-201ENSMUST00000188281 1536 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Mir466i-201ENSMUST00000116924 121 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm14868-201ENSMUST00000117840 216 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm14469-201ENSMUST00000118363 202 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm11259-201ENSMUST00000120554 715 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm13642-201ENSMUST00000121697 381 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm23224-201ENSMUST00000158122 271 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm22113-201ENSMUST00000158343 104 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm22424-201ENSMUST00000158527 87 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm22257-201ENSMUST00000158687 301 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Scgb2b23-ps-202ENSMUST00000167012 516 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trim35Q8C006 Znrf1-210ENSMUST00000173781 337 ntTSL 3 BASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm16404-201ENSMUST00000177739 468 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm14598-201ENSMUST00000180109 468 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm5849-201ENSMUST00000180151 351 ntAPPRIS P1 TSL 3 BASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm14625-201ENSMUST00000180231 468 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm27435-201ENSMUST00000183588 88 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 1700024B18Rik-201ENSMUST00000190088 423 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm29020-201ENSMUST00000191166 290 ntTSL 5 BASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm37416-201ENSMUST00000193596 318 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm43147-201ENSMUST00000196944 542 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm42808-201ENSMUST00000198212 285 ntTSL 5 BASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm31305-201ENSMUST00000198557 710 ntTSL 3 BASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm42891-201ENSMUST00000199340 281 ntTSL 5 BASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm44881-201ENSMUST00000205425 367 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm18207-201ENSMUST00000205486 526 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Mypopos-203ENSMUST00000206304 441 ntTSL 3 BASIC7.7□□□□□ -1.18
Trim35Q8C006 AC162176.1-201ENSMUST00000216490 618 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 AC160962.3-201ENSMUST00000225914 112 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 AC113269.1-201ENSMUST00000227185 674 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 AC154649.2-201ENSMUST00000228189 808 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm6104-201ENSMUST00000078030 603 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm26264-201ENSMUST00000083278 159 ntBASIC7.7□□□□□ -1.18
Trim35Q8C006 Rps12-ps3-201ENSMUST00000086764 494 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Trim35Q8C006 Usp8-201ENSMUST00000028841 4145 ntAPPRIS P3 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim35Q8C006 Psg26-201ENSMUST00000094798 2086 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim35Q8C006 Gm14120-201ENSMUST00000129067 2869 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trim35Q8C006 Sap30bp-203ENSMUST00000140991 3654 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim35Q8C006 Rftn2-201ENSMUST00000027121 3677 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim35Q8C006 Olfr373-202ENSMUST00000213940 4145 ntAPPRIS P1 TSL 5 BASIC7.7□□□□□ -1.18
Trim35Q8C006 Ehhadh-201ENSMUST00000023559 3018 ntAPPRIS P1 TSL 1 (best) BASIC7.7□□□□□ -1.18
Trim35Q8C006 AI429214-201ENSMUST00000098825 1930 ntAPPRIS P1 BASIC7.7□□□□□ -1.18
Trim35Q8C006 Fbxl5-203ENSMUST00000114047 2762 ntTSL 1 (best) BASIC7.7□□□□□ -1.18
Trim35Q8C006 Usp7-207ENSMUST00000160405 4745 ntTSL 5 BASIC7.7□□□□□ -1.18
Trim35Q8C006 Clcn7-204ENSMUST00000160961 3983 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trim35Q8C006 Akap2-201ENSMUST00000043456 7211 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim35Q8C006 Birc6-204ENSMUST00000182133 14604 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Trim35Q8C006 Birc6-215ENSMUST00000182597 14649 ntAPPRIS ALT2 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim35Q8C006 Birc6-220ENSMUST00000182944 14610 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Trim35Q8C006 Gm14471-201ENSMUST00000141035 2358 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trim35Q8C006 Ankrd49-206ENSMUST00000216372 2679 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim35Q8C006 Lrp2-201ENSMUST00000080953 15460 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Trim35Q8C006 Gm36527-201ENSMUST00000195500 3029 ntBASIC7.69□□□□□ -1.18
Trim35Q8C006 AC154597.1-201ENSMUST00000224095 2713 ntBASIC7.69□□□□□ -1.18
Trim35Q8C006 Olfr612-202ENSMUST00000214269 2420 ntAPPRIS P1 TSL 5 BASIC7.69□□□□□ -1.18
Trim35Q8C006 Trrap-202ENSMUST00000094120 12456 ntAPPRIS ALT2 TSL 5 BASIC7.69□□□□□ -1.18
Trim35Q8C006 Sec22a-201ENSMUST00000043521 3992 ntAPPRIS P1 TSL 1 (best) BASIC7.69□□□□□ -1.18
Trim35Q8C006 Gm45174-201ENSMUST00000208884 3065 ntBASIC7.69□□□□□ -1.18
Trim35Q8C006 Kpna2-ps-201ENSMUST00000120025 1569 ntBASIC7.69□□□□□ -1.18
Trim35Q8C006 1700060C20Rik-201ENSMUST00000109506 605 ntTSL 1 (best) BASIC7.69□□□□□ -1.18
Trim35Q8C006 Gm22679-201ENSMUST00000116975 100 ntBASIC7.69□□□□□ -1.18
Trim35Q8C006 Gm12285-201ENSMUST00000117347 233 ntBASIC7.69□□□□□ -1.18
Trim35Q8C006 Gm11649-201ENSMUST00000118214 375 ntBASIC7.69□□□□□ -1.18
Trim35Q8C006 Gm7312-201ENSMUST00000118798 469 ntBASIC7.69□□□□□ -1.18
Retrieved 100 of 76,532 protein–RNA pairs in 69.4 ms