Protein–RNA interactions for Protein: Q78JW9

Ubfd1, Ubiquitin domain-containing protein UBFD1, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubfd1Q78JW9 Gm27688-201ENSMUST00000183634 91 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm29405-201ENSMUST00000187204 370 ntTSL 5 BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm29557-201ENSMUST00000188245 370 ntTSL 5 BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm28769-201ENSMUST00000190176 615 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm28174-201ENSMUST00000191003 370 ntTSL 5 BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm37073-201ENSMUST00000192469 1222 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm36974-201ENSMUST00000194200 1071 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm17893-201ENSMUST00000203017 770 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm44817-201ENSMUST00000205416 453 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Olfr540-ps1-201ENSMUST00000210499 612 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 AC120394.1-201ENSMUST00000217153 351 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 AC134468.2-201ENSMUST00000222549 672 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm40884-201ENSMUST00000223505 541 ntTSL 3 BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Cox7b2-201ENSMUST00000050129 542 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm3526-201ENSMUST00000164544 1750 ntAPPRIS P1 TSL 5 BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm9077-201ENSMUST00000210657 2298 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Cdk14-203ENSMUST00000115451 5145 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Atp7a-201ENSMUST00000055941 4866 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm37485-201ENSMUST00000192326 2953 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gnpnat1-206ENSMUST00000227468 1490 ntAPPRIS P1 BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Ccdc66-202ENSMUST00000223689 4262 ntAPPRIS P2 BASIC5□□□□□ -1.61
Ubfd1Q78JW9 Gm37767-201ENSMUST00000193239 1834 ntBASIC5□□□□□ -1.61
Ubfd1Q78JW9 Vmn1r81-204ENSMUST00000228482 13495 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Pum2-209ENSMUST00000168361 6226 ntAPPRIS P3 TSL 5 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Nfia-205ENSMUST00000107062 9239 ntTSL 5 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Cenpj-201ENSMUST00000065302 4363 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Olfr387-ps1-201ENSMUST00000134773 1513 ntAPPRIS P1 TSL 3 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Postn-202ENSMUST00000081564 2670 ntAPPRIS ALT2 TSL 5 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Ccnb2-ps-201ENSMUST00000118290 623 ntBASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm12387-201ENSMUST00000118573 955 ntBASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm12873-201ENSMUST00000119988 422 ntBASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm14739-201ENSMUST00000120424 802 ntBASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm12096-201ENSMUST00000121149 829 ntBASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm16412-201ENSMUST00000121602 273 ntBASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm22478-201ENSMUST00000122570 154 ntBASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 9030622O22Rik-201ENSMUST00000129082 1245 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 4930563I02Rik-202ENSMUST00000154835 971 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm10177-202ENSMUST00000161698 207 ntBASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm27492-201ENSMUST00000185194 187 ntBASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm5734-201ENSMUST00000189787 913 ntBASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Pinc-202ENSMUST00000190487 961 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm37228-201ENSMUST00000193574 331 ntTSL 5 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 AC164567.4-201ENSMUST00000219708 483 ntBASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 AC159622.3-201ENSMUST00000221010 361 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Rpl29-ps2-203ENSMUST00000222043 1036 ntTSL 5 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 AC158523.2-201ENSMUST00000222708 548 ntBASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Tpbpa-202ENSMUST00000225275 642 ntAPPRIS ALT2 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 AC108945.1-201ENSMUST00000226477 94 ntBASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm9964-201ENSMUST00000068448 728 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm6812-201ENSMUST00000074894 525 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm23626-201ENSMUST00000082458 133 ntBASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm23796-201ENSMUST00000084011 160 ntBASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Obp1a-201ENSMUST00000088201 757 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 n-R5s13-201ENSMUST00000093707 119 ntBASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Kcnh7-201ENSMUST00000075052 13321 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Kynu-202ENSMUST00000050511 2778 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Trim23-202ENSMUST00000069174 4258 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 1700091H14Rik-202ENSMUST00000185725 1388 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm43201-201ENSMUST00000195925 3416 ntBASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Matr3-201ENSMUST00000166793 6262 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm29098-201ENSMUST00000186104 1498 ntTSL 5 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm28130-201ENSMUST00000186321 1498 ntTSL 5 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm28089-202ENSMUST00000187266 1498 ntTSL 5 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm29204-202ENSMUST00000187384 1498 ntTSL 5 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm28753-201ENSMUST00000187804 1498 ntTSL 5 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm28518-203ENSMUST00000188788 1498 ntTSL 5 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm28488-203ENSMUST00000188792 1498 ntTSL 5 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Vmn1r219-203ENSMUST00000227388 7948 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Erbin-204ENSMUST00000169083 5435 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Serpinb9b-201ENSMUST00000006392 3253 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Abcg3-202ENSMUST00000130644 2668 ntTSL 5 BASIC4.99□□□□□ -1.61
Ubfd1Q78JW9 Olfr1355-201ENSMUST00000078414 3317 ntAPPRIS P1 TSL 2 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Lrrn3-201ENSMUST00000043884 3865 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Zfy1-202ENSMUST00000189888 2864 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 AC120153.1-201ENSMUST00000226502 1311 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Btbd35f19-201ENSMUST00000178444 1960 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Btbd35f20-201ENSMUST00000179325 1960 ntAPPRIS P1 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 A830019L24Rik-202ENSMUST00000198056 3165 ntTSL 3 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Gm45149-201ENSMUST00000206459 2172 ntBASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Serpinb3b-202ENSMUST00000166100 1632 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 St18-213ENSMUST00000163727 5604 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC4.98□□□□□ -1.61
Ubfd1Q78JW9 Vmn2r5-201ENSMUST00000170270 2484 ntAPPRIS P2 TSL 5 BASIC4.98□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 65.8 ms