Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim28Q62318 Gm42843-201ENSMUST00000196328 3616 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm9611-201ENSMUST00000100698 231 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Gm11042-201ENSMUST00000110441 120 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 2610042L04Rik-201ENSMUST00000112778 599 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim28Q62318 Gm12245-201ENSMUST00000117266 357 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm15333-201ENSMUST00000118825 364 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Gm15414-201ENSMUST00000155217 440 ntTSL 3 BASIC6.22□□□□□ -1.41
Trim28Q62318 Gm24444-201ENSMUST00000157244 308 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm22339-201ENSMUST00000157718 62 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm23501-201ENSMUST00000157744 256 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm15796-201ENSMUST00000162135 204 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 4930579O11Rik-202ENSMUST00000168243 672 ntTSL 3 BASIC6.22□□□□□ -1.41
Trim28Q62318 Malat1-202ENSMUST00000173314 556 ntTSL 3 BASIC6.22□□□□□ -1.41
Trim28Q62318 Gm21095-201ENSMUST00000177775 498 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Gm20916-201ENSMUST00000178063 498 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Gm21760-201ENSMUST00000179811 498 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Gm21477-201ENSMUST00000179970 498 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Gm21117-201ENSMUST00000180133 498 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Gm20855-201ENSMUST00000180170 498 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Gm20931-201ENSMUST00000180249 498 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Gm20896-201ENSMUST00000180332 498 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Gm26991-201ENSMUST00000180950 620 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim28Q62318 Gtpbp4-ps2-201ENSMUST00000184058 256 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Mir7028-201ENSMUST00000185016 64 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm28113-201ENSMUST00000188280 229 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm20885-201ENSMUST00000190192 654 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm37578-201ENSMUST00000192256 1177 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm31942-201ENSMUST00000192534 827 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Trbv28-201ENSMUST00000192804 264 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm8599-201ENSMUST00000193033 457 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm29740-201ENSMUST00000193182 655 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm36866-201ENSMUST00000193343 657 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm36047-201ENSMUST00000193659 657 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm20857-201ENSMUST00000194766 657 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm20858-201ENSMUST00000195459 657 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm30275-202ENSMUST00000198124 416 ntTSL 3 BASIC6.22□□□□□ -1.41
Trim28Q62318 Gm18747-201ENSMUST00000198129 648 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm43090-201ENSMUST00000202459 314 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 AL929417.1-201ENSMUST00000214901 124 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Gm46103-201ENSMUST00000217614 341 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 AC154198.1-201ENSMUST00000222839 424 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 CT025603.4-201ENSMUST00000225777 413 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 AL589742.1-201ENSMUST00000226034 349 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Zfp825-201ENSMUST00000074369 822 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 n-R5s168-201ENSMUST00000083948 104 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Olfr33-201ENSMUST00000084817 957 ntAPPRIS P1 BASIC6.22□□□□□ -1.41
Trim28Q62318 Ceacam2-201ENSMUST00000044547 2844 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Gm44434-201ENSMUST00000203918 3745 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Lrrc4c-201ENSMUST00000059049 3492 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim28Q62318 Gm37558-201ENSMUST00000193684 2983 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Olfr350-203ENSMUST00000215100 2086 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim28Q62318 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Zfp867-201ENSMUST00000057799 3412 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim28Q62318 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Cnot1-203ENSMUST00000211887 8364 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim28Q62318 Gm13712-201ENSMUST00000117484 2295 ntBASIC6.22□□□□□ -1.41
Trim28Q62318 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC6.21□□□□□ -1.41
Trim28Q62318 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC6.21□□□□□ -1.41
Trim28Q62318 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC6.21□□□□□ -1.41
Trim28Q62318 Serpinb9f-201ENSMUST00000075515 1912 ntAPPRIS P1 TSL 1 (best) BASIC6.21□□□□□ -1.41
Trim28Q62318 Lpar6-201ENSMUST00000044405 5400 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim28Q62318 Zfp811-201ENSMUST00000080905 1656 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim28Q62318 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC6.21□□□□□ -1.42
Trim28Q62318 Btbd35f1-201ENSMUST00000178070 1955 ntAPPRIS P1 BASIC6.21□□□□□ -1.42
Trim28Q62318 Gm24374-201ENSMUST00000104394 106 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Gm25773-201ENSMUST00000116718 127 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Gm14751-201ENSMUST00000117693 222 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Defa-ps15-201ENSMUST00000118178 477 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Gm15443-201ENSMUST00000118947 820 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Gm11420-201ENSMUST00000120047 402 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Gm13860-201ENSMUST00000125185 452 ntTSL 3 BASIC6.21□□□□□ -1.42
Trim28Q62318 Magea9-ps-201ENSMUST00000140655 732 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim28Q62318 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim28Q62318 Gm23906-201ENSMUST00000157573 128 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Magea9-ps-202ENSMUST00000167328 899 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Vmn2r-ps126-201ENSMUST00000176711 1149 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Gm27165-201ENSMUST00000183951 232 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Gm29073-201ENSMUST00000185563 664 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Gm20954-201ENSMUST00000189078 644 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Gm29165-201ENSMUST00000190655 664 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Gm29211-201ENSMUST00000191470 664 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Gm37167-201ENSMUST00000194946 396 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Gm37291-201ENSMUST00000195637 533 ntTSL 5 BASIC6.21□□□□□ -1.42
Trim28Q62318 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Gm18482-201ENSMUST00000202405 760 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Gm44431-201ENSMUST00000203500 413 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Gm6261-201ENSMUST00000204707 760 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC6.21□□□□□ -1.42
Trim28Q62318 AC156832.3-201ENSMUST00000215591 435 ntBASIC6.21□□□□□ -1.42
Trim28Q62318 Gm18892-201ENSMUST00000217628 881 ntBASIC6.21□□□□□ -1.42
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms