Protein–RNA interactions for Protein: Q04887

Sox9, Transcription factor SOX-9, mousemouse

Predictions only

Length 507 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox9Q04887 Gm14887-201ENSMUST00000119522 663 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 Gm7079-201ENSMUST00000119726 171 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 Gm13737-201ENSMUST00000119793 232 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 Gm14125-202ENSMUST00000120921 756 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 Gm11260-201ENSMUST00000121163 942 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 Gm6568-201ENSMUST00000122274 697 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 Gm14211-201ENSMUST00000152250 408 ntTSL 3 BASIC5.69□□□□□ -1.5
Sox9Q04887 Gm25665-201ENSMUST00000157695 110 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 Gm24734-201ENSMUST00000158860 262 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 Gm15812-201ENSMUST00000162331 748 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 Gm8256-201ENSMUST00000169178 453 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 Gm29550-201ENSMUST00000185543 285 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 Gm28730-201ENSMUST00000185939 702 ntTSL 5 BASIC5.69□□□□□ -1.5
Sox9Q04887 Gm29563-201ENSMUST00000187249 496 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 Rpl26-ps3-201ENSMUST00000195115 435 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 Gm9236-201ENSMUST00000196892 587 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 Gm44307-201ENSMUST00000204466 764 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 Gm44580-201ENSMUST00000206333 877 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 Olfr1295-202ENSMUST00000207786 1043 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
Sox9Q04887 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 Gm6171-201ENSMUST00000220760 645 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 AC156560.1-201ENSMUST00000221425 256 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 Cd200r3-202ENSMUST00000077178 767 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
Sox9Q04887 Shprh-201ENSMUST00000044053 9271 ntAPPRIS P4 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox9Q04887 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.69□□□□□ -1.5
Sox9Q04887 Bmpr1b-204ENSMUST00000106232 4164 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox9Q04887 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Sox9Q04887 Sult1b1-201ENSMUST00000031199 2604 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox9Q04887 Sirpb1c-203ENSMUST00000108350 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox9Q04887 Jade3-201ENSMUST00000043693 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox9Q04887 Aspn-201ENSMUST00000021820 2310 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox9Q04887 CT025686.2-201ENSMUST00000227898 3315 ntBASIC5.69□□□□□ -1.5
Sox9Q04887 Gm7903-202ENSMUST00000179953 3519 ntAPPRIS ALT2 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox9Q04887 Olfr137-202ENSMUST00000213505 2514 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
Sox9Q04887 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.69□□□□□ -1.5
Sox9Q04887 Rgs13-202ENSMUST00000111941 1545 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
Sox9Q04887 Gm37762-201ENSMUST00000194515 3561 ntBASIC5.68□□□□□ -1.5
Sox9Q04887 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox9Q04887 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.68□□□□□ -1.5
Sox9Q04887 Adgrg2-203ENSMUST00000112401 4632 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Sox9Q04887 Adgrg2-204ENSMUST00000112402 4641 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox9Q04887 Adgrg2-205ENSMUST00000112404 4601 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox9Q04887 Adgrg2-206ENSMUST00000112405 4634 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox9Q04887 Asxl3-201ENSMUST00000097655 11697 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox9Q04887 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Sox9Q04887 Gm43874-201ENSMUST00000204853 2798 ntBASIC5.68□□□□□ -1.5
Sox9Q04887 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox9Q04887 Olfr1423-202ENSMUST00000214472 5570 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox9Q04887 Olfr1340-203ENSMUST00000216242 3341 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Sox9Q04887 AC155167.2-201ENSMUST00000226127 1945 ntBASIC5.68□□□□□ -1.5
Sox9Q04887 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox9Q04887 Gm44175-201ENSMUST00000204863 4256 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox9Q04887 Ostn-201ENSMUST00000066852 1423 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox9Q04887 Dnah1-201ENSMUST00000048603 12872 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox9Q04887 Gm22591-201ENSMUST00000104243 106 ntBASIC5.68□□□□□ -1.5
Sox9Q04887 Tex38-201ENSMUST00000106521 802 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox9Q04887 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox9Q04887 4930444P10Rik-201ENSMUST00000115367 868 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
Sox9Q04887 Gm11912-201ENSMUST00000117235 264 ntBASIC5.68□□□□□ -1.5
Sox9Q04887 Gm11878-201ENSMUST00000117908 400 ntBASIC5.68□□□□□ -1.5
Sox9Q04887 Asxl3-202ENSMUST00000120223 11485 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox9Q04887 Gm16463-201ENSMUST00000120527 721 ntBASIC5.68□□□□□ -1.5
Sox9Q04887 Defa-ps14-201ENSMUST00000121373 418 ntBASIC5.68□□□□□ -1.5
Sox9Q04887 Olfr405-ps1-202ENSMUST00000127098 711 ntTSL 3 BASIC5.68□□□□□ -1.5
Sox9Q04887 Gm7846-201ENSMUST00000145844 274 ntBASIC5.68□□□□□ -1.5
Sox9Q04887 Gm20643-201ENSMUST00000177284 322 ntTSL 3 BASIC5.68□□□□□ -1.5
Sox9Q04887 Gm27834-201ENSMUST00000183427 125 ntBASIC5.68□□□□□ -1.5
Sox9Q04887 Gm29413-201ENSMUST00000186019 880 ntBASIC5.68□□□□□ -1.5
Sox9Q04887 Gm28870-201ENSMUST00000187033 880 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
Sox9Q04887 Gm29639-201ENSMUST00000188375 580 ntBASIC5.68□□□□□ -1.5
Sox9Q04887 2610012C04Rik-201ENSMUST00000193434 1023 ntBASIC5.68□□□□□ -1.5
Sox9Q04887 Gm42542-201ENSMUST00000197978 268 ntBASIC5.68□□□□□ -1.5
Sox9Q04887 Gm43418-201ENSMUST00000201334 428 ntBASIC5.68□□□□□ -1.5
Sox9Q04887 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC5.68□□□□□ -1.5
Sox9Q04887 Gm45710-201ENSMUST00000212847 215 ntBASIC5.68□□□□□ -1.5
Sox9Q04887 AC154627.3-201ENSMUST00000228441 334 ntBASIC5.68□□□□□ -1.5
Sox9Q04887 AC158981.3-202ENSMUST00000228906 523 ntBASIC5.68□□□□□ -1.5
Sox9Q04887 Olfr821-201ENSMUST00000054364 933 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sox9Q04887 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sox9Q04887 A630073D07Rik-201ENSMUST00000091791 484 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Sox9Q04887 Olfr1195-201ENSMUST00000099818 927 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
Sox9Q04887 Clmn-201ENSMUST00000109936 11866 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox9Q04887 Nol8-201ENSMUST00000021824 4242 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
Sox9Q04887 Cpb2-201ENSMUST00000022576 1477 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox9Q04887 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.68□□□□□ -1.5
Sox9Q04887 Olfr1215-203ENSMUST00000216271 2608 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
Sox9Q04887 Pum2-201ENSMUST00000020915 3587 ntAPPRIS ALT2 TSL 1 (best) BASIC5.68□□□□□ -1.5
Sox9Q04887 B530045E10Rik-204ENSMUST00000220146 3244 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
Sox9Q04887 Gm13310-201ENSMUST00000120962 1381 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Gm7073-202ENSMUST00000166562 1369 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sox9Q04887 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sox9Q04887 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox9Q04887 Gm44735-201ENSMUST00000206197 1752 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Vmn2r102-201ENSMUST00000171741 2574 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Sox9Q04887 Zfp287-206ENSMUST00000185656 3370 ntAPPRIS P2 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox9Q04887 Zfp106-211ENSMUST00000171215 6391 ntTSL 5 BASIC5.67□□□□□ -1.5
Sox9Q04887 AC122382.2-201ENSMUST00000225128 3602 ntBASIC5.67□□□□□ -1.5
Sox9Q04887 Zfy2-202ENSMUST00000187148 2846 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
Sox9Q04887 Gm10415-201ENSMUST00000204181 2825 ntTSL 2 BASIC5.67□□□□□ -1.5
Sox9Q04887 Gm29048-202ENSMUST00000190399 1601 ntTSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 79.7 ms