Protein–RNA interactions for Protein: Q03358

Msx2, Homeobox protein MSX-2, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Msx2Q03358 4930503H13Rik-201ENSMUST00000118320 725 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Gm12186-201ENSMUST00000119050 945 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Gm15231-201ENSMUST00000119174 447 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Gm14106-201ENSMUST00000119382 438 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Gm14927-201ENSMUST00000120283 454 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Gm5405-201ENSMUST00000120478 609 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Gm13531-201ENSMUST00000121893 543 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Gm11341-201ENSMUST00000122316 447 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Xaf1-202ENSMUST00000140842 651 ntTSL 3 BASIC5.54□□□□□ -1.52
Msx2Q03358 Gm12409-201ENSMUST00000147231 646 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Msx2Q03358 Gm6058-201ENSMUST00000154261 399 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Gm23762-201ENSMUST00000158348 106 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Gm22160-201ENSMUST00000158405 328 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Gm24737-201ENSMUST00000158861 100 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 A730017C20Rik-206ENSMUST00000175830 731 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Msx2Q03358 Gm25874-201ENSMUST00000178030 79 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Msx2Q03358 Mir6921-201ENSMUST00000183719 80 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 1700029M03Rik-201ENSMUST00000187300 444 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Msx2Q03358 1700027A15Rik-202ENSMUST00000188349 617 ntTSL 3 BASIC5.54□□□□□ -1.52
Msx2Q03358 Gm43510-201ENSMUST00000197922 353 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 AC151967.1-201ENSMUST00000198146 76 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Trav15n-2-201ENSMUST00000199112 398 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Msx2Q03358 Trav15d-2-dv6d-2-201ENSMUST00000199800 398 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Msx2Q03358 Gm44055-201ENSMUST00000204376 247 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Gm32772-201ENSMUST00000205898 594 ntTSL 3 BASIC5.54□□□□□ -1.52
Msx2Q03358 Gm19140-201ENSMUST00000209790 421 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Gm20163-201ENSMUST00000212232 494 ntTSL 3 BASIC5.54□□□□□ -1.52
Msx2Q03358 AC091764.3-201ENSMUST00000219646 300 ntTSL 5 BASIC5.54□□□□□ -1.52
Msx2Q03358 AC170086.1-201ENSMUST00000225190 497 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 CT010498.1-201ENSMUST00000225382 546 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Msx2Q03358 AC154618.2-201ENSMUST00000228299 452 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Glt6d1-201ENSMUST00000038010 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msx2Q03358 Ear14-201ENSMUST00000049559 468 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
Msx2Q03358 Vmn1r70-201ENSMUST00000055847 897 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
Msx2Q03358 n-R5s37-201ENSMUST00000082533 118 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 1700109H08Rik-201ENSMUST00000008451 773 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msx2Q03358 Gm44209-201ENSMUST00000204556 4153 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Wdr17-202ENSMUST00000127511 4668 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Msx2Q03358 Olfr104-ps-201ENSMUST00000178766 1972 ntAPPRIS ALT2 TSL 5 BASIC5.54□□□□□ -1.52
Msx2Q03358 Olfr535-203ENSMUST00000213715 5033 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Msx2Q03358 Stag3-209ENSMUST00000162245 4123 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Msx2Q03358 Gm19514-201ENSMUST00000206856 4489 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Gm42661-201ENSMUST00000202364 1442 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Gm42561-201ENSMUST00000202563 1442 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC5.54□□□□□ -1.52
Msx2Q03358 Ezh1-201ENSMUST00000100417 3636 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Msx2Q03358 Ifi44-201ENSMUST00000029671 2910 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Msx2Q03358 Gm43359-201ENSMUST00000197944 2200 ntBASIC5.54□□□□□ -1.52
Msx2Q03358 Platr25-202ENSMUST00000220733 2859 ntAPPRIS P5 TSL 5 BASIC5.53□□□□□ -1.52
Msx2Q03358 Gm43027-201ENSMUST00000202906 3691 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Olfr1480-204ENSMUST00000207987 1804 ntTSL 3 BASIC5.53□□□□□ -1.52
Msx2Q03358 Elf1-204ENSMUST00000227192 3765 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Msx2Q03358 Dennd6a-204ENSMUST00000224248 2775 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Gm2832-201ENSMUST00000172412 1760 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Msx2Q03358 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.53□□□□□ -1.52
Msx2Q03358 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Msx2Q03358 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Msx2Q03358 Tmigd3-201ENSMUST00000010279 900 ntAPPRIS P2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Msx2Q03358 Igkv6-23-201ENSMUST00000103386 369 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Msx2Q03358 S100a1-202ENSMUST00000107340 577 ntTSL 2 BASIC5.53□□□□□ -1.52
Msx2Q03358 Il19-202ENSMUST00000112465 880 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Msx2Q03358 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Msx2Q03358 Gm24275-201ENSMUST00000116780 146 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Gm14575-201ENSMUST00000117210 560 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Gm16216-201ENSMUST00000118970 1111 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Gm11438-201ENSMUST00000121582 189 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Gm12343-201ENSMUST00000138817 414 ntTSL 3 BASIC5.53□□□□□ -1.52
Msx2Q03358 Gm15521-201ENSMUST00000141752 835 ntTSL 2 BASIC5.53□□□□□ -1.52
Msx2Q03358 Gm16079-201ENSMUST00000149065 578 ntTSL 3 BASIC5.53□□□□□ -1.52
Msx2Q03358 Gm16231-201ENSMUST00000160432 319 ntTSL 3 BASIC5.53□□□□□ -1.52
Msx2Q03358 Gm16290-201ENSMUST00000161175 474 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Gm26954-201ENSMUST00000182106 622 ntTSL 3 BASIC5.53□□□□□ -1.52
Msx2Q03358 Gm27037-201ENSMUST00000182270 960 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Ranbp2-ps6-201ENSMUST00000183722 381 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Mir7212-201ENSMUST00000184098 61 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Gm38050-201ENSMUST00000191904 238 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Gm43652-201ENSMUST00000196219 675 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Gm44494-201ENSMUST00000196760 129 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Msx2Q03358 Gm5050-201ENSMUST00000197164 775 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Gm5983-201ENSMUST00000197739 770 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Gm43669-201ENSMUST00000198229 436 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Gm43685-201ENSMUST00000198876 706 ntTSL 3 BASIC5.53□□□□□ -1.52
Msx2Q03358 Gm44468-201ENSMUST00000199516 105 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Gm44060-201ENSMUST00000204440 410 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Gm44134-202ENSMUST00000204777 545 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Olfr593-202ENSMUST00000210686 951 ntAPPRIS ALT2 BASIC5.53□□□□□ -1.52
Msx2Q03358 Tecr-214ENSMUST00000212990 648 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Msx2Q03358 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Msx2Q03358 AC139638.1-201ENSMUST00000218027 364 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 AC102312.1-203ENSMUST00000219530 763 ntTSL 2 BASIC5.53□□□□□ -1.52
Msx2Q03358 Gm10095-201ENSMUST00000222765 483 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 AL671874.1-201ENSMUST00000223746 1123 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.53□□□□□ -1.52
Msx2Q03358 Otor-201ENSMUST00000028902 949 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 109.8 ms