Protein–RNA interactions for Protein: P97436

Nkx3-1, Homeobox protein Nkx-3.1, mousemouse

Predictions only

Length 237 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1P97436 Hmgb1-203ENSMUST00000110505 1720 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Nkx3-1P97436 Olfr393-202ENSMUST00000213365 4048 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Nkx3-1P97436 Tdo2-201ENSMUST00000029645 3431 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Nkx3-1P97436 Olfr741-203ENSMUST00000213903 3305 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Nkx3-1P97436 Vmn1r169-202ENSMUST00000226669 2326 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Nkx3-1P97436 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Nkx3-1P97436 Dnah6-203ENSMUST00000114040 12513 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Nkx3-1P97436 Igkv14-100-201ENSMUST00000103325 350 ntAPPRIS ALT2 BASIC3.81□□□□□ -1.8
Nkx3-1P97436 Gm12719-201ENSMUST00000118859 241 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 Gm14957-201ENSMUST00000121069 817 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 Gm22514-201ENSMUST00000122547 308 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 Gm10444-201ENSMUST00000126708 148 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 Gm15597-201ENSMUST00000145924 1050 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Nkx3-1P97436 Gm26373-201ENSMUST00000157833 103 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 Gm24745-201ENSMUST00000157840 85 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 Gm24961-201ENSMUST00000157918 184 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 Gm22367-201ENSMUST00000178930 132 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 Cldn34b4-202ENSMUST00000178974 881 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Nkx3-1P97436 Gm28889-201ENSMUST00000185350 959 ntTSL 5 BASIC3.81□□□□□ -1.8
Nkx3-1P97436 Gm29426-202ENSMUST00000186564 536 ntTSL 5 BASIC3.81□□□□□ -1.8
Nkx3-1P97436 Trbv11-201ENSMUST00000194354 260 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 Gm7449-201ENSMUST00000194393 663 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC3.81□□□□□ -1.8
Nkx3-1P97436 Olfr1089-201ENSMUST00000214317 1118 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Nkx3-1P97436 AC132446.1-201ENSMUST00000222655 226 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 AC130536.1-201ENSMUST00000224425 271 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 AC154788.1-201ENSMUST00000225003 340 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 AC160756.1-201ENSMUST00000227266 235 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Nkx3-1P97436 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Nkx3-1P97436 n-R5s162-201ENSMUST00000082581 119 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Nkx3-1P97436 Olfr1196-202ENSMUST00000216928 4270 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Nkx3-1P97436 Gm43888-201ENSMUST00000204405 2587 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 Gm5248-201ENSMUST00000186108 4046 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 Gm38106-201ENSMUST00000194107 2534 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 5930435M05Rik-201ENSMUST00000207572 3712 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 Agtr1b-202ENSMUST00000163776 1633 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Nkx3-1P97436 Gm37527-201ENSMUST00000192406 3547 ntBASIC3.81□□□□□ -1.8
Nkx3-1P97436 Gm45321-201ENSMUST00000209286 2863 ntTSL 5 BASIC3.81□□□□□ -1.8
Nkx3-1P97436 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nkx3-1P97436 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nkx3-1P97436 Olfr1500-202ENSMUST00000214475 2697 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nkx3-1P97436 Elavl2-202ENSMUST00000102799 3840 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Nkx3-1P97436 Olfr1311-202ENSMUST00000213602 2631 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nkx3-1P97436 9330132A10Rik-201ENSMUST00000059118 3727 ntBASIC3.8□□□□□ -1.8
Nkx3-1P97436 Olfr32-204ENSMUST00000215153 3117 ntAPPRIS P1 TSL 2 BASIC3.8□□□□□ -1.8
Nkx3-1P97436 Tnfrsf26-202ENSMUST00000208124 3062 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Nkx3-1P97436 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC3.8□□□□□ -1.8
Nkx3-1P97436 Gm37668-201ENSMUST00000193745 1944 ntBASIC3.8□□□□□ -1.8
Nkx3-1P97436 Oog3-201ENSMUST00000050933 1865 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nkx3-1P97436 Mir551b-201ENSMUST00000102165 98 ntBASIC3.8□□□□□ -1.8
Nkx3-1P97436 Igkv14-111-201ENSMUST00000103320 368 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nkx3-1P97436 Gm22269-201ENSMUST00000104002 130 ntBASIC3.8□□□□□ -1.8
Nkx3-1P97436 Gm15426-201ENSMUST00000117823 556 ntBASIC3.8□□□□□ -1.8
Nkx3-1P97436 Gm16158-201ENSMUST00000123509 785 ntTSL 5 BASIC3.8□□□□□ -1.8
Nkx3-1P97436 Gm23554-201ENSMUST00000157818 110 ntBASIC3.8□□□□□ -1.8
Nkx3-1P97436 Gm26219-201ENSMUST00000175216 71 ntBASIC3.8□□□□□ -1.8
Nkx3-1P97436 Obox8-201ENSMUST00000184356 1167 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nkx3-1P97436 Mrgprb13-201ENSMUST00000188191 985 ntBASIC3.8□□□□□ -1.8
Nkx3-1P97436 Gm5066-201ENSMUST00000188479 822 ntBASIC3.8□□□□□ -1.8
Nkx3-1P97436 Gm30280-201ENSMUST00000192214 262 ntBASIC3.8□□□□□ -1.8
Nkx3-1P97436 Gm37881-201ENSMUST00000193001 421 ntBASIC3.8□□□□□ -1.8
Nkx3-1P97436 Gm43304-201ENSMUST00000196803 326 ntBASIC3.8□□□□□ -1.8
Nkx3-1P97436 Gm19596-201ENSMUST00000203685 739 ntBASIC3.8□□□□□ -1.8
Nkx3-1P97436 4930458B22Rik-201ENSMUST00000209339 754 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Nkx3-1P97436 Sult2a7-203ENSMUST00000210034 870 ntTSL 5 BASIC3.8□□□□□ -1.8
Nkx3-1P97436 Gm45359-201ENSMUST00000210635 427 ntBASIC3.8□□□□□ -1.8
Nkx3-1P97436 Arl2bp-203ENSMUST00000211858 318 ntTSL 5 BASIC3.8□□□□□ -1.8
Nkx3-1P97436 AC165164.1-202ENSMUST00000219324 649 ntTSL 3 BASIC3.8□□□□□ -1.8
Nkx3-1P97436 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Nkx3-1P97436 AC154371.1-201ENSMUST00000226600 412 ntBASIC3.8□□□□□ -1.8
Nkx3-1P97436 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nkx3-1P97436 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nkx3-1P97436 Vmn1r178-201ENSMUST00000078593 915 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nkx3-1P97436 n-R5s167-201ENSMUST00000083227 121 ntBASIC3.8□□□□□ -1.8
Nkx3-1P97436 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Nkx3-1P97436 Atp1b4-201ENSMUST00000016471 4201 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Nkx3-1P97436 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Nkx3-1P97436 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC3.8□□□□□ -1.8
Nkx3-1P97436 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Nkx3-1P97436 Gm43871-201ENSMUST00000204931 1955 ntBASIC3.8□□□□□ -1.8
Nkx3-1P97436 Olfr149-202ENSMUST00000215192 2806 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Nkx3-1P97436 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nkx3-1P97436 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC3.79□□□□□ -1.8
Nkx3-1P97436 Gm43059-201ENSMUST00000202437 1388 ntBASIC3.79□□□□□ -1.8
Nkx3-1P97436 Gm37461-201ENSMUST00000193929 3704 ntBASIC3.79□□□□□ -1.8
Nkx3-1P97436 Gm42729-201ENSMUST00000201770 2930 ntBASIC3.79□□□□□ -1.8
Nkx3-1P97436 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC3.79□□□□□ -1.8
Nkx3-1P97436 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC3.79□□□□□ -1.8
Nkx3-1P97436 Snora64-201ENSMUST00000104521 134 ntBASIC3.79□□□□□ -1.8
Nkx3-1P97436 Gm13737-201ENSMUST00000119793 232 ntBASIC3.79□□□□□ -1.8
Nkx3-1P97436 Gm22204-201ENSMUST00000122654 327 ntBASIC3.79□□□□□ -1.8
Nkx3-1P97436 Gm14095-201ENSMUST00000134264 516 ntTSL 3 BASIC3.79□□□□□ -1.8
Nkx3-1P97436 Gm22816-201ENSMUST00000157450 117 ntBASIC3.79□□□□□ -1.8
Nkx3-1P97436 Gm24675-201ENSMUST00000158757 259 ntBASIC3.79□□□□□ -1.8
Nkx3-1P97436 Snrpe-201ENSMUST00000164096 669 ntTSL 2 BASIC3.79□□□□□ -1.8
Nkx3-1P97436 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC3.79□□□□□ -1.8
Nkx3-1P97436 Mir6418-201ENSMUST00000185075 115 ntBASIC3.79□□□□□ -1.8
Nkx3-1P97436 Gm29527-201ENSMUST00000190722 622 ntTSL 5 BASIC3.79□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 55.1 ms