Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Mir6907-201ENSMUST00000183764 71 ntBASIC6.05□□□□□ -1.44
Sox1P53783 Gm29148-201ENSMUST00000188140 336 ntBASIC6.05□□□□□ -1.44
Sox1P53783 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.05□□□□□ -1.44
Sox1P53783 Gm28078-201ENSMUST00000190381 874 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox1P53783 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.05□□□□□ -1.44
Sox1P53783 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC6.05□□□□□ -1.44
Sox1P53783 Gm44373-201ENSMUST00000196112 169 ntBASIC6.05□□□□□ -1.44
Sox1P53783 Gm42812-201ENSMUST00000199844 337 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox1P53783 Gm6719-201ENSMUST00000202067 335 ntBASIC6.05□□□□□ -1.44
Sox1P53783 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC6.05□□□□□ -1.44
Sox1P53783 Gm6929-201ENSMUST00000210930 468 ntBASIC6.05□□□□□ -1.44
Sox1P53783 Gm2059-201ENSMUST00000212025 287 ntBASIC6.05□□□□□ -1.44
Sox1P53783 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC6.05□□□□□ -1.44
Sox1P53783 AC159208.1-201ENSMUST00000221403 649 ntBASIC6.05□□□□□ -1.44
Sox1P53783 AC154816.1-201ENSMUST00000222688 634 ntTSL 3 BASIC6.05□□□□□ -1.44
Sox1P53783 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC6.05□□□□□ -1.44
Sox1P53783 Mir181a-2-201ENSMUST00000083489 76 ntBASIC6.05□□□□□ -1.44
Sox1P53783 Mir346-201ENSMUST00000083547 98 ntBASIC6.05□□□□□ -1.44
Sox1P53783 n-R5s13-201ENSMUST00000093707 119 ntBASIC6.05□□□□□ -1.44
Sox1P53783 Gm45876-201ENSMUST00000212698 2709 ntBASIC6.05□□□□□ -1.44
Sox1P53783 Gm10033-204ENSMUST00000213012 7778 ntTSL 3 BASIC6.05□□□□□ -1.44
Sox1P53783 Gm12299-201ENSMUST00000138819 2327 ntTSL 1 (best) BASIC6.05□□□□□ -1.44
Sox1P53783 Bmp10-201ENSMUST00000032125 4490 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.44
Sox1P53783 Gm8750-201ENSMUST00000173278 1537 ntBASIC6.04□□□□□ -1.44
Sox1P53783 Srrm4os-201ENSMUST00000126959 3360 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox1P53783 Olfr596-202ENSMUST00000214577 3392 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sox1P53783 Olfr183-201ENSMUST00000073320 2040 ntAPPRIS P1 TSL 2 BASIC6.04□□□□□ -1.44
Sox1P53783 Tmprss15-201ENSMUST00000023566 4177 ntAPPRIS P3 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox1P53783 Olfr530-202ENSMUST00000216727 1958 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sox1P53783 Vmn1r44-205ENSMUST00000226345 1965 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sox1P53783 Dlg2-204ENSMUST00000107196 7490 ntAPPRIS P2 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox1P53783 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sox1P53783 Olfr1087-202ENSMUST00000214141 3861 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sox1P53783 Ptpn22-201ENSMUST00000029433 2743 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox1P53783 Olfr675-202ENSMUST00000210113 3671 ntTSL 5 BASIC6.04□□□□□ -1.44
Sox1P53783 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox1P53783 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC6.04□□□□□ -1.44
Sox1P53783 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.04□□□□□ -1.44
Sox1P53783 Gm15010-201ENSMUST00000117153 407 ntBASIC6.04□□□□□ -1.44
Sox1P53783 Gm13866-201ENSMUST00000118901 968 ntBASIC6.04□□□□□ -1.44
Sox1P53783 Gm12293-201ENSMUST00000121898 590 ntBASIC6.04□□□□□ -1.44
Sox1P53783 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox1P53783 Gm11545-201ENSMUST00000146507 375 ntBASIC6.04□□□□□ -1.44
Sox1P53783 Rgs2-204ENSMUST00000153527 588 ntTSL 2 BASIC6.04□□□□□ -1.44
Sox1P53783 Gm24847-201ENSMUST00000158032 108 ntBASIC6.04□□□□□ -1.44
Sox1P53783 Gm7609-204ENSMUST00000161424 461 ntBASIC6.04□□□□□ -1.44
Sox1P53783 Pate1-201ENSMUST00000170021 389 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sox1P53783 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC6.04□□□□□ -1.44
Sox1P53783 Vmn1r-ps51-201ENSMUST00000175667 320 ntBASIC6.04□□□□□ -1.44
Sox1P53783 Rian-214ENSMUST00000183026 596 ntTSL 5 BASIC6.04□□□□□ -1.44
Sox1P53783 Gm28418-201ENSMUST00000186179 423 ntBASIC6.04□□□□□ -1.44
Sox1P53783 Gm28141-201ENSMUST00000186676 342 ntBASIC6.04□□□□□ -1.44
Sox1P53783 Gm2979-201ENSMUST00000193442 463 ntBASIC6.04□□□□□ -1.44
Sox1P53783 Olfr277-ps1-201ENSMUST00000205749 285 ntBASIC6.04□□□□□ -1.44
Sox1P53783 Gm19140-201ENSMUST00000209790 421 ntBASIC6.04□□□□□ -1.44
Sox1P53783 Gm3442-201ENSMUST00000216808 710 ntBASIC6.04□□□□□ -1.44
Sox1P53783 AC154598.1-201ENSMUST00000227079 347 ntBASIC6.04□□□□□ -1.44
Sox1P53783 AC163646.1-201ENSMUST00000227704 397 ntBASIC6.04□□□□□ -1.44
Sox1P53783 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox1P53783 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sox1P53783 Olfr1066-201ENSMUST00000099885 942 ntAPPRIS P1 BASIC6.04□□□□□ -1.44
Sox1P53783 Gm15975-201ENSMUST00000122385 1402 ntBASIC6.04□□□□□ -1.44
Sox1P53783 Gm44275-201ENSMUST00000203442 2519 ntTSL 1 (best) BASIC6.04□□□□□ -1.44
Sox1P53783 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.04□□□□□ -1.44
Sox1P53783 Olfr16-202ENSMUST00000215254 2690 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sox1P53783 Vps50-201ENSMUST00000001412 3788 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox1P53783 Gm11743-201ENSMUST00000117385 1735 ntBASIC6.04□□□□□ -1.44
Sox1P53783 Mettl4-201ENSMUST00000171284 2150 ntAPPRIS P1 TSL 1 (best) BASIC6.04□□□□□ -1.44
Sox1P53783 Olfr934-202ENSMUST00000214324 2462 ntAPPRIS P1 TSL 5 BASIC6.04□□□□□ -1.44
Sox1P53783 A930004J17Rik-201ENSMUST00000192689 4610 ntBASIC6.03□□□□□ -1.44
Sox1P53783 Tcf7l2-213ENSMUST00000111662 3715 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
Sox1P53783 Vmn1r22-206ENSMUST00000228905 2394 ntBASIC6.03□□□□□ -1.44
Sox1P53783 Serpinb11-201ENSMUST00000027566 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 Fbxw15-201ENSMUST00000056745 1495 ntAPPRIS P2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 Nlrc3-204ENSMUST00000180200 3842 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.03□□□□□ -1.44
Sox1P53783 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.03□□□□□ -1.44
Sox1P53783 Deup1-202ENSMUST00000115592 2918 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 Atf2-203ENSMUST00000100009 3936 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 Gm45297-201ENSMUST00000209893 3483 ntBASIC6.03□□□□□ -1.44
Sox1P53783 Olfr1427-203ENSMUST00000216069 1863 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sox1P53783 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 Plekhg1-201ENSMUST00000042438 7190 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 Gm8267-203ENSMUST00000226900 1592 ntAPPRIS ALT2 BASIC6.03□□□□□ -1.44
Sox1P53783 Gm5427-201ENSMUST00000217680 2591 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 Wdr49-201ENSMUST00000193989 2413 ntAPPRIS P1 TSL 5 BASIC6.03□□□□□ -1.44
Sox1P53783 Gm24544-201ENSMUST00000103862 110 ntBASIC6.03□□□□□ -1.44
Sox1P53783 Gm14638-201ENSMUST00000121338 216 ntBASIC6.03□□□□□ -1.44
Sox1P53783 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 Gm12214-201ENSMUST00000151643 417 ntTSL 5 BASIC6.03□□□□□ -1.44
Sox1P53783 Gm22158-201ENSMUST00000158411 126 ntBASIC6.03□□□□□ -1.44
Sox1P53783 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
Sox1P53783 Gm10662-201ENSMUST00000168053 942 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox1P53783 Pid1-206ENSMUST00000176822 1119 ntTSL 2 BASIC6.03□□□□□ -1.44
Sox1P53783 Gm6882-201ENSMUST00000177741 942 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox1P53783 Gm5891-201ENSMUST00000179493 942 ntAPPRIS P1 BASIC6.03□□□□□ -1.44
Sox1P53783 1810064F22Rik-202ENSMUST00000187399 630 ntTSL 3 BASIC6.03□□□□□ -1.44
Sox1P53783 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC6.03□□□□□ -1.44
Retrieved 100 of 76,532 protein–RNA pairs in 78.9 ms