Protein–RNA interactions for Protein: P39428

Traf1, TNF receptor-associated factor 1, mousemouse

Predictions only

Length 409 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1P39428 Gm42559-201ENSMUST00000201811 3532 ntBASIC5.41□□□□□ -1.54
Traf1P39428 Olfr397-202ENSMUST00000213134 4048 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Traf1P39428 Igkv4-70-201ENSMUST00000103348 379 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Traf1P39428 Gm26143-201ENSMUST00000104480 108 ntBASIC5.41□□□□□ -1.54
Traf1P39428 Gm15019-201ENSMUST00000120148 434 ntBASIC5.41□□□□□ -1.54
Traf1P39428 Gm13508-201ENSMUST00000121639 775 ntBASIC5.41□□□□□ -1.54
Traf1P39428 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Traf1P39428 1810065E05Rik-201ENSMUST00000013797 926 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Traf1P39428 Gm42936-201ENSMUST00000174019 652 ntTSL 3 BASIC5.41□□□□□ -1.54
Traf1P39428 Gm20389-201ENSMUST00000174217 1006 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Traf1P39428 Gm29281-201ENSMUST00000188077 381 ntBASIC5.41□□□□□ -1.54
Traf1P39428 Gm35667-201ENSMUST00000199122 711 ntTSL 5 BASIC5.41□□□□□ -1.54
Traf1P39428 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC5.41□□□□□ -1.54
Traf1P39428 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.41□□□□□ -1.54
Traf1P39428 4930503L19Rik-202ENSMUST00000211817 913 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Traf1P39428 AC153801.1-201ENSMUST00000217904 947 ntBASIC5.41□□□□□ -1.54
Traf1P39428 Gm40658-202ENSMUST00000221900 701 ntTSL 5 BASIC5.41□□□□□ -1.54
Traf1P39428 AC156559.1-201ENSMUST00000224158 222 ntBASIC5.41□□□□□ -1.54
Traf1P39428 AC164116.1-201ENSMUST00000225810 622 ntBASIC5.41□□□□□ -1.54
Traf1P39428 Prss37-201ENSMUST00000031967 1049 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Traf1P39428 Csn2-201ENSMUST00000082370 1117 ntAPPRIS ALT2 TSL 1 (best) BASIC5.41□□□□□ -1.54
Traf1P39428 Gm25739-201ENSMUST00000082886 107 ntBASIC5.41□□□□□ -1.54
Traf1P39428 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC5.41□□□□□ -1.54
Traf1P39428 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC5.41□□□□□ -1.54
Traf1P39428 Gm42949-201ENSMUST00000197054 2202 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Traf1P39428 Gm42704-201ENSMUST00000196875 1778 ntBASIC5.41□□□□□ -1.54
Traf1P39428 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC5.41□□□□□ -1.54
Traf1P39428 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.41□□□□□ -1.54
Traf1P39428 AC187103.2-201ENSMUST00000223605 1617 ntBASIC5.41□□□□□ -1.54
Traf1P39428 Xirp2-201ENSMUST00000028410 11955 ntAPPRIS P1 TSL 1 (best) BASIC5.41□□□□□ -1.54
Traf1P39428 Gm43594-201ENSMUST00000201153 3442 ntBASIC5.41□□□□□ -1.54
Traf1P39428 Olfr364-ps1-202ENSMUST00000214905 1914 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Traf1P39428 Olfr753-ps1-204ENSMUST00000219487 2956 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Traf1P39428 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC5.4□□□□□ -1.54
Traf1P39428 Olfr920-201ENSMUST00000074740 5711 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.54
Traf1P39428 Gm16294-201ENSMUST00000070382 1459 ntTSL 2 BASIC5.4□□□□□ -1.54
Traf1P39428 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Traf1P39428 Slc15a2-201ENSMUST00000023616 3993 ntAPPRIS P2 TSL 1 (best) BASIC5.4□□□□□ -1.54
Traf1P39428 Vmn1r184-202ENSMUST00000227230 7999 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Traf1P39428 Olfr1487-205ENSMUST00000217061 4080 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.54
Traf1P39428 Igkv1-133-201ENSMUST00000103304 374 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Traf1P39428 Olfr1159-ps1-201ENSMUST00000117651 913 ntBASIC5.4□□□□□ -1.54
Traf1P39428 Gm15923-201ENSMUST00000119300 1169 ntBASIC5.4□□□□□ -1.54
Traf1P39428 Gm12577-201ENSMUST00000119701 574 ntBASIC5.4□□□□□ -1.54
Traf1P39428 Gm22958-201ENSMUST00000122512 184 ntBASIC5.4□□□□□ -1.54
Traf1P39428 Tnfaip8-203ENSMUST00000126666 906 ntTSL 2 BASIC5.4□□□□□ -1.54
Traf1P39428 Gm3160-201ENSMUST00000128343 607 ntBASIC5.4□□□□□ -1.54
Traf1P39428 Gm15245-201ENSMUST00000129410 1186 ntTSL 1 (best) BASIC5.4□□□□□ -1.54
Traf1P39428 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC5.4□□□□□ -1.54
Traf1P39428 Gm27564-201ENSMUST00000185196 96 ntBASIC5.4□□□□□ -1.54
Traf1P39428 Gm28389-201ENSMUST00000190090 697 ntBASIC5.4□□□□□ -1.54
Traf1P39428 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC5.4□□□□□ -1.54
Traf1P39428 9430037O13Rik-201ENSMUST00000192556 1008 ntBASIC5.4□□□□□ -1.54
Traf1P39428 Gm44485-201ENSMUST00000199569 137 ntBASIC5.4□□□□□ -1.54
Traf1P39428 Irf2-209ENSMUST00000210218 535 ntTSL 3 BASIC5.4□□□□□ -1.54
Traf1P39428 Gm45462-201ENSMUST00000211267 792 ntTSL 5 BASIC5.4□□□□□ -1.54
Traf1P39428 Gm45702-201ENSMUST00000211856 644 ntTSL 2 BASIC5.4□□□□□ -1.54
Traf1P39428 Olfr854-202ENSMUST00000212872 939 ntAPPRIS ALT2 BASIC5.4□□□□□ -1.54
Traf1P39428 Ly6e-ps1-201ENSMUST00000222501 367 ntBASIC5.4□□□□□ -1.54
Traf1P39428 AC154184.2-201ENSMUST00000225335 349 ntBASIC5.4□□□□□ -1.54
Traf1P39428 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC5.4□□□□□ -1.54
Traf1P39428 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Traf1P39428 Olfr8-201ENSMUST00000081571 933 ntAPPRIS P1 BASIC5.4□□□□□ -1.54
Traf1P39428 Gm25810-201ENSMUST00000082752 108 ntBASIC5.4□□□□□ -1.54
Traf1P39428 Gm25140-201ENSMUST00000083254 140 ntBASIC5.4□□□□□ -1.54
Traf1P39428 Gcc2-208ENSMUST00000162860 6400 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Traf1P39428 Olfr669-202ENSMUST00000210138 2195 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
Traf1P39428 Vmn1r184-204ENSMUST00000227534 4807 ntAPPRIS P1 BASIC5.4□□□□□ -1.55
Traf1P39428 Olfr665-203ENSMUST00000216257 2298 ntAPPRIS P1 TSL 5 BASIC5.4□□□□□ -1.55
Traf1P39428 Olfr131-202ENSMUST00000172933 1358 ntAPPRIS P1 TSL 3 BASIC5.4□□□□□ -1.55
Traf1P39428 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC5.4□□□□□ -1.55
Traf1P39428 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC5.4□□□□□ -1.55
Traf1P39428 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Traf1P39428 Gm37099-201ENSMUST00000191902 3451 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Gm38307-201ENSMUST00000195630 1840 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Chek1-205ENSMUST00000173963 1509 ntTSL 5 BASIC5.39□□□□□ -1.55
Traf1P39428 Nfia-204ENSMUST00000107057 8913 ntTSL 5 BASIC5.39□□□□□ -1.55
Traf1P39428 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Traf1P39428 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
Traf1P39428 Xlr5d-ps-201ENSMUST00000117501 782 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Gm11325-201ENSMUST00000119967 469 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Olfr660-ps1-201ENSMUST00000121526 375 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Gm25106-201ENSMUST00000122672 134 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Gm24441-201ENSMUST00000157235 281 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Gm23501-201ENSMUST00000157744 256 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Gm22646-201ENSMUST00000175130 115 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Vmn1r-ps143-201ENSMUST00000176730 604 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC5.39□□□□□ -1.55
Traf1P39428 Ms4a2-205ENSMUST00000189641 647 ntTSL 3 BASIC5.39□□□□□ -1.55
Traf1P39428 Gm37636-201ENSMUST00000193583 359 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Gm38221-201ENSMUST00000195146 365 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Gm43828-201ENSMUST00000196890 639 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Gm33093-201ENSMUST00000197751 790 ntTSL 5 BASIC5.39□□□□□ -1.55
Traf1P39428 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Gm45228-201ENSMUST00000206585 352 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Gm18258-201ENSMUST00000210413 542 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Gm45247-201ENSMUST00000210757 309 ntBASIC5.39□□□□□ -1.55
Traf1P39428 Gm18487-201ENSMUST00000215826 878 ntBASIC5.39□□□□□ -1.55
Traf1P39428 AC154335.2-201ENSMUST00000225916 638 ntBASIC5.39□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 75.8 ms