Protein–RNA interactions for Protein: P18828

Sdc1, Syndecan-1, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc1P18828 Gm21960-201ENSMUST00000181924 452 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Gm19585-201ENSMUST00000186007 587 ntTSL 2 BASIC3.64□□□□□ -1.83
Sdc1P18828 Gm28550-201ENSMUST00000189125 618 ntTSL 5 BASIC3.64□□□□□ -1.83
Sdc1P18828 Gm28460-202ENSMUST00000190590 618 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Sdc1P18828 Gm19214-201ENSMUST00000191956 1083 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Gm37193-201ENSMUST00000193087 513 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Gm38045-201ENSMUST00000193536 199 ntTSL 5 BASIC3.64□□□□□ -1.83
Sdc1P18828 Gm20056-201ENSMUST00000194813 519 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Gm38234-201ENSMUST00000195204 421 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Gm38509-201ENSMUST00000197492 1150 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Sdc1P18828 Gm31305-202ENSMUST00000200435 761 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Sdc1P18828 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
Sdc1P18828 Gm45031-201ENSMUST00000206800 288 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Gm5339-201ENSMUST00000210551 1102 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 AC151968.1-201ENSMUST00000214437 568 ntTSL 5 BASIC3.64□□□□□ -1.83
Sdc1P18828 AC151971.3-201ENSMUST00000214694 404 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Olfr228-201ENSMUST00000216534 942 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Sdc1P18828 Olfr964-ps1-201ENSMUST00000217577 914 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Sdc1P18828 Gm46192-201ENSMUST00000217894 326 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 AC123064.1-201ENSMUST00000218950 406 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Gm30262-201ENSMUST00000219137 791 ntTSL 5 BASIC3.64□□□□□ -1.83
Sdc1P18828 AC132384.13-201ENSMUST00000219556 1159 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 AC162467.1-201ENSMUST00000220254 621 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 AC192333.6-201ENSMUST00000224565 725 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 AC154239.2-201ENSMUST00000227859 233 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC3.64□□□□□ -1.83
Sdc1P18828 2310061N02Rik-201ENSMUST00000050882 794 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Sdc1P18828 Olfr1052-201ENSMUST00000054746 940 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Sdc1P18828 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Sdc1P18828 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Sdc1P18828 Gm24144-201ENSMUST00000082632 111 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Gm22126-201ENSMUST00000083244 142 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 n-R5s168-201ENSMUST00000083948 104 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Olfr519-201ENSMUST00000084752 960 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Olfr1321-201ENSMUST00000088876 1056 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
Sdc1P18828 Olfr875-202ENSMUST00000215128 2039 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Sdc1P18828 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC3.64□□□□□ -1.83
Sdc1P18828 Vmn2r-ps45-201ENSMUST00000174138 2435 ntBASIC3.64□□□□□ -1.83
Sdc1P18828 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Sdc1P18828 Olfr710-201ENSMUST00000055923 1312 ntAPPRIS P1 TSL 5 BASIC3.64□□□□□ -1.83
Sdc1P18828 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Sdc1P18828 Ptgs2-201ENSMUST00000035065 4453 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
Sdc1P18828 Gm44678-201ENSMUST00000207828 2775 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 Obscn-201ENSMUST00000020732 23483 ntTSL 5 BASIC3.63□□□□□ -1.83
Sdc1P18828 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sdc1P18828 Gm5127-202ENSMUST00000101297 1809 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sdc1P18828 Olfr1305-202ENSMUST00000213405 1815 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Sdc1P18828 Adam26b-201ENSMUST00000080135 2476 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sdc1P18828 Stk31-204ENSMUST00000172459 2922 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Sdc1P18828 Gm23709-201ENSMUST00000104364 130 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 Gm6565-201ENSMUST00000121217 438 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 Gm13487-201ENSMUST00000122240 864 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sdc1P18828 Gm15762-201ENSMUST00000126447 333 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Sdc1P18828 Gm14710-201ENSMUST00000146082 1066 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 Gm23669-201ENSMUST00000157470 128 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 Gm26172-201ENSMUST00000158421 134 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 4933417A18Rik-201ENSMUST00000160279 1045 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sdc1P18828 Gm16490-201ENSMUST00000165299 351 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 Gm17081-201ENSMUST00000167363 478 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 Vmn1r155-201ENSMUST00000177632 924 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Sdc1P18828 Vmn1r137-201ENSMUST00000177884 924 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Sdc1P18828 Vmn1r130-201ENSMUST00000177936 924 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Sdc1P18828 Vmn1r107-201ENSMUST00000179079 924 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Sdc1P18828 Gm8807-201ENSMUST00000179328 492 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 Vmn1r165-201ENSMUST00000179594 924 ntAPPRIS P1 BASIC3.63□□□□□ -1.83
Sdc1P18828 Rpl31-ps16-201ENSMUST00000181130 376 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 Gm26969-201ENSMUST00000183203 648 ntTSL 3 BASIC3.63□□□□□ -1.83
Sdc1P18828 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC3.63□□□□□ -1.83
Sdc1P18828 Gm28724-202ENSMUST00000194218 295 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 Csn1s2b-204ENSMUST00000197301 627 ntAPPRIS ALT2 TSL 5 BASIC3.63□□□□□ -1.83
Sdc1P18828 Gm33952-201ENSMUST00000197795 408 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 1700016F12Rik-201ENSMUST00000198159 655 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Sdc1P18828 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC3.63□□□□□ -1.83
Sdc1P18828 Alox5ap-203ENSMUST00000200928 356 ntTSL 3 BASIC3.63□□□□□ -1.83
Sdc1P18828 4930487D11Rik-201ENSMUST00000201983 295 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
Sdc1P18828 Gm44232-201ENSMUST00000204537 225 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 Olfr840-ps1-201ENSMUST00000211827 917 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC3.63□□□□□ -1.83
Sdc1P18828 AC134917.2-201ENSMUST00000223354 124 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 AC154335.2-201ENSMUST00000225916 638 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 AC126690.1-201ENSMUST00000228898 397 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 Gm15421-201ENSMUST00000051985 443 ntTSL 3 BASIC3.63□□□□□ -1.83
Sdc1P18828 n-R5s160-201ENSMUST00000083096 120 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 Gm6361-201ENSMUST00000091031 435 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC3.63□□□□□ -1.83
Sdc1P18828 Vmn2r-ps128-201ENSMUST00000176367 2570 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 Olfr988-202ENSMUST00000111597 1702 ntAPPRIS P1 TSL 3 BASIC3.63□□□□□ -1.83
Sdc1P18828 Ifi203-203ENSMUST00000123708 3482 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sdc1P18828 Syne2-201ENSMUST00000044217 21690 ntAPPRIS P2 TSL 5 BASIC3.63□□□□□ -1.83
Sdc1P18828 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC3.63□□□□□ -1.83
Sdc1P18828 Xrn1-202ENSMUST00000185633 10256 ntAPPRIS ALT2 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sdc1P18828 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC3.63□□□□□ -1.83
Sdc1P18828 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 Obox4-ps12-201ENSMUST00000180084 1362 ntBASIC3.63□□□□□ -1.83
Sdc1P18828 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
Sdc1P18828 Gm830-201ENSMUST00000142458 3502 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
Sdc1P18828 Gm8744-201ENSMUST00000204475 3581 ntBASIC3.62□□□□□ -1.83
Sdc1P18828 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
Retrieved 100 of 76,532 protein–RNA pairs in 96.2 ms