Protein–RNA interactions for Protein: P18111

Cdx1, Homeobox protein CDX-1, mousemouse

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdx1P18111 Vmn1r169-204ENSMUST00000227932 2745 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Cdx1P18111 Vmn1r80-204ENSMUST00000227471 6368 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC3.85□□□□□ -1.79
Cdx1P18111 Ddi1-201ENSMUST00000051706 7114 ntAPPRIS P1 BASIC3.85□□□□□ -1.79
Cdx1P18111 Gm37211-201ENSMUST00000193392 3433 ntBASIC3.85□□□□□ -1.79
Cdx1P18111 Gm36963-201ENSMUST00000193506 2324 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Olfr134-202ENSMUST00000215900 1670 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm43527-201ENSMUST00000198749 3178 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Rtl4-201ENSMUST00000096301 1758 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Cdx1P18111 Slfn8-201ENSMUST00000038141 4011 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Cdx1P18111 Olfr575-202ENSMUST00000213477 3512 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Pds5b-203ENSMUST00000110486 2900 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Cdx1P18111 Trbv12-1-201ENSMUST00000103267 389 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Cdx1P18111 Igkv1-88-201ENSMUST00000103336 362 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm24170-201ENSMUST00000104124 133 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Gm12073-201ENSMUST00000117382 524 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Gm14706-201ENSMUST00000117744 255 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Olfr383-ps1-201ENSMUST00000118895 935 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Gm14605-201ENSMUST00000120599 268 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Gm12978-201ENSMUST00000121250 522 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Gm11910-201ENSMUST00000121624 432 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Rps10-ps3-201ENSMUST00000122317 500 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Gm14905-201ENSMUST00000122351 639 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 n-R5s61-201ENSMUST00000122711 118 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Gm15517-201ENSMUST00000124863 251 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm16060-201ENSMUST00000153140 478 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Vmn2r-ps124-201ENSMUST00000176236 903 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Gm20834-201ENSMUST00000179558 684 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm21971-201ENSMUST00000180187 337 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 2310031A07Rik-201ENSMUST00000181212 990 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Cdx1P18111 C130060C02Rik-201ENSMUST00000181731 1142 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Cdx1P18111 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm27952-201ENSMUST00000184748 105 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Gm27733-201ENSMUST00000184803 68 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Gm29532-201ENSMUST00000185593 622 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm29504-201ENSMUST00000185605 537 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm29360-201ENSMUST00000185625 537 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm28296-202ENSMUST00000186151 622 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm29498-201ENSMUST00000186449 537 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm28565-202ENSMUST00000186615 537 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm28297-201ENSMUST00000186679 537 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm28326-201ENSMUST00000187043 622 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm28301-201ENSMUST00000187582 537 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm28464-201ENSMUST00000187726 622 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm29286-202ENSMUST00000187736 537 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm28295-201ENSMUST00000188322 622 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm29578-201ENSMUST00000188809 537 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm29166-202ENSMUST00000189600 537 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 1700023F02Rik-203ENSMUST00000189619 473 ntTSL 3 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm28765-201ENSMUST00000189752 537 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm28617-202ENSMUST00000190129 537 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm28522-202ENSMUST00000190561 537 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm28834-202ENSMUST00000190714 537 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm28987-201ENSMUST00000191071 537 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Ly6e-215ENSMUST00000191436 1122 ntAPPRIS P1 TSL 1 (best) BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm29132-202ENSMUST00000191588 622 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm30174-201ENSMUST00000191682 537 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm36261-201ENSMUST00000191807 537 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm34550-202ENSMUST00000195186 537 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm37490-201ENSMUST00000195566 724 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Gm17954-201ENSMUST00000195893 607 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm43698-202ENSMUST00000202864 555 ntTSL 3 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm8703-201ENSMUST00000203793 730 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Gm45006-201ENSMUST00000206078 690 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Gm18193-201ENSMUST00000210017 772 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Olfr588-ps1-202ENSMUST00000210115 912 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Gm45317-201ENSMUST00000210385 223 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 1700011L03Rik-201ENSMUST00000210613 608 ntTSL 1 (best) BASIC3.84□□□□□ -1.79
Cdx1P18111 CT486006.1-201ENSMUST00000216797 227 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 AC152979.3-201ENSMUST00000217720 479 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 AC117240.2-201ENSMUST00000220921 263 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Hmgb1-ps11-201ENSMUST00000221749 621 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Cdx1P18111 Olfr1168-201ENSMUST00000079599 939 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Cdx1P18111 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Snora52-201ENSMUST00000082732 137 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Olfr1249-201ENSMUST00000099769 957 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Cdx1P18111 Olfr1218-201ENSMUST00000099798 936 ntAPPRIS P1 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm44235-201ENSMUST00000204312 3058 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Vmn1r37-202ENSMUST00000226311 1305 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC3.84□□□□□ -1.79
Cdx1P18111 Gm44689-201ENSMUST00000208786 1372 ntTSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Vmn1r14-204ENSMUST00000227768 7005 ntAPPRIS P2 BASIC3.84□□□□□ -1.79
Cdx1P18111 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Sirpb1a-201ENSMUST00000099201 1419 ntAPPRIS ALT2 TSL 5 BASIC3.84□□□□□ -1.79
Cdx1P18111 Gm44224-201ENSMUST00000204131 1463 ntBASIC3.84□□□□□ -1.8
Cdx1P18111 Gm14305-202ENSMUST00000108981 1646 ntAPPRIS P1 TSL 2 BASIC3.84□□□□□ -1.8
Cdx1P18111 Olfr64-201ENSMUST00000081748 5001 ntAPPRIS P1 BASIC3.84□□□□□ -1.8
Cdx1P18111 Gm44822-201ENSMUST00000208559 6389 ntBASIC3.84□□□□□ -1.8
Cdx1P18111 Gm44424-201ENSMUST00000203438 1826 ntBASIC3.84□□□□□ -1.8
Cdx1P18111 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.83□□□□□ -1.8
Cdx1P18111 Gm15518-201ENSMUST00000127115 2108 ntTSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx1P18111 Gm38069-201ENSMUST00000195360 2144 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Kera-201ENSMUST00000105286 2280 ntAPPRIS P1 TSL 1 (best) BASIC3.83□□□□□ -1.8
Cdx1P18111 Gm43886-201ENSMUST00000205039 2386 ntBASIC3.83□□□□□ -1.8
Cdx1P18111 Gm37195-201ENSMUST00000192006 3018 ntBASIC3.83□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 82 ms