Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 4930449A18Rik-202ENSMUST00000192453 1200 ntBASIC6.28□□□□□ -1.4
RaraP11416 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm22897-202ENSMUST00000197782 127 ntBASIC6.28□□□□□ -1.4
RaraP11416 Gm43669-201ENSMUST00000198229 436 ntBASIC6.28□□□□□ -1.4
RaraP11416 Gm7166-201ENSMUST00000199715 303 ntBASIC6.28□□□□□ -1.4
RaraP11416 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC6.28□□□□□ -1.4
RaraP11416 Olfr1482-ps1-201ENSMUST00000207181 178 ntBASIC6.28□□□□□ -1.4
RaraP11416 2210406H18Rik-201ENSMUST00000207806 1108 ntBASIC6.28□□□□□ -1.4
RaraP11416 Ifitm6-203ENSMUST00000211330 813 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
RaraP11416 Gm7692-201ENSMUST00000213534 409 ntBASIC6.28□□□□□ -1.4
RaraP11416 Olfr746-202ENSMUST00000218546 987 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 4930563J15Rik-203ENSMUST00000219796 574 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RaraP11416 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Fgb-201ENSMUST00000048246 3810 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RaraP11416 Olfr1112-201ENSMUST00000053050 957 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RaraP11416 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RaraP11416 Ifnk-201ENSMUST00000058595 805 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RaraP11416 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RaraP11416 Gm7808-201ENSMUST00000082002 387 ntBASIC6.28□□□□□ -1.4
RaraP11416 Olfr859-201ENSMUST00000086480 930 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RaraP11416 Olfr556-201ENSMUST00000098219 1023 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
RaraP11416 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Trp53bp1-202ENSMUST00000110648 9621 ntAPPRIS P3 TSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RaraP11416 Vmn2r34-201ENSMUST00000173459 3616 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm5512-201ENSMUST00000218013 1353 ntBASIC6.28□□□□□ -1.4
RaraP11416 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RaraP11416 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Tead1-202ENSMUST00000069256 9480 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RaraP11416 Rc3h2-202ENSMUST00000112934 8948 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RaraP11416 Gm38198-201ENSMUST00000191772 3581 ntBASIC6.28□□□□□ -1.4
RaraP11416 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC6.28□□□□□ -1.4
RaraP11416 Olfr57-202ENSMUST00000203906 1647 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 AC124569.3-201ENSMUST00000224860 1621 ntBASIC6.28□□□□□ -1.4
RaraP11416 Rbm41-201ENSMUST00000033810 2787 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RaraP11416 Gm28432-201ENSMUST00000185237 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm29662-201ENSMUST00000185620 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm28082-201ENSMUST00000185683 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm28679-201ENSMUST00000186013 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm29565-202ENSMUST00000186260 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm28338-202ENSMUST00000186269 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm28668-202ENSMUST00000186549 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm28135-201ENSMUST00000186847 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm28291-202ENSMUST00000186921 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm29393-201ENSMUST00000187002 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm29219-201ENSMUST00000187224 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm29547-201ENSMUST00000187258 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm28260-201ENSMUST00000187337 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm28225-201ENSMUST00000187730 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm29569-202ENSMUST00000187955 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm29625-201ENSMUST00000188079 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm28735-202ENSMUST00000188159 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm29297-202ENSMUST00000188186 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm29457-201ENSMUST00000188224 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm29190-201ENSMUST00000188255 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm28236-203ENSMUST00000188311 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm28197-203ENSMUST00000188434 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm29070-202ENSMUST00000188541 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm28545-201ENSMUST00000188667 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm29265-201ENSMUST00000188697 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm28947-203ENSMUST00000188701 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm29616-201ENSMUST00000188777 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm29162-202ENSMUST00000188893 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm28606-201ENSMUST00000188938 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm29338-201ENSMUST00000189318 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm29425-202ENSMUST00000189421 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm29271-203ENSMUST00000189943 1499 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RaraP11416 Gm28454-203ENSMUST00000190183 1495 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm28842-202ENSMUST00000190289 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm28318-203ENSMUST00000190347 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm28633-202ENSMUST00000190867 1485 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm29182-202ENSMUST00000191008 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm28632-202ENSMUST00000191193 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm28245-203ENSMUST00000191551 1495 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm38370-201ENSMUST00000192545 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm32114-203ENSMUST00000195759 1499 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Cntnap5a-201ENSMUST00000043725 10945 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
RaraP11416 Gm7240-204ENSMUST00000222847 2239 ntTSL 2 BASIC6.27□□□□□ -1.4
RaraP11416 Crem-230ENSMUST00000151311 2485 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.4
RaraP11416 Olfr1564-202ENSMUST00000208645 5213 ntAPPRIS ALT1 TSL 5 BASIC6.27□□□□□ -1.41
RaraP11416 Gm6634-201ENSMUST00000180497 1804 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
RaraP11416 Anapc10-201ENSMUST00000048147 2801 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RaraP11416 Oprk1-204ENSMUST00000160777 4675 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RaraP11416 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.27□□□□□ -1.41
RaraP11416 Naip2-203ENSMUST00000167986 4356 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
RaraP11416 Slfn4-201ENSMUST00000000208 3958 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RaraP11416 Atp8a2-201ENSMUST00000080368 12886 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
RaraP11416 Wrn-202ENSMUST00000033991 6262 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
RaraP11416 Gm16270-201ENSMUST00000160327 3238 ntBASIC6.27□□□□□ -1.41
RaraP11416 Gm24265-201ENSMUST00000101833 141 ntBASIC6.27□□□□□ -1.41
RaraP11416 Bpifc-202ENSMUST00000105304 451 ntTSL 5 BASIC6.27□□□□□ -1.41
RaraP11416 Gm6923-201ENSMUST00000118343 406 ntBASIC6.27□□□□□ -1.41
RaraP11416 Defa-ps11-201ENSMUST00000119719 299 ntBASIC6.27□□□□□ -1.41
RaraP11416 Olfr343-ps1-201ENSMUST00000121883 303 ntBASIC6.27□□□□□ -1.41
RaraP11416 Gm14970-201ENSMUST00000122289 355 ntBASIC6.27□□□□□ -1.41
RaraP11416 Gm22479-201ENSMUST00000122566 81 ntBASIC6.27□□□□□ -1.41
RaraP11416 Zfp783-203ENSMUST00000130463 537 ntTSL 2 BASIC6.27□□□□□ -1.41
RaraP11416 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms