Protein–RNA interactions for Protein: P11260

Lire1, LINE-1 retrotransposable element ORF1 protein, mousemouse

Predictions only

Length 357 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lire1P11260 Gm14589-201ENSMUST00000121640 727 ntBASIC4.79□□□□□ -1.64
Lire1P11260 Gm26310-201ENSMUST00000157766 117 ntBASIC4.79□□□□□ -1.64
Lire1P11260 Il19-201ENSMUST00000016668 1021 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lire1P11260 Ctla2b-202ENSMUST00000171347 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lire1P11260 Vmn1r158-201ENSMUST00000174643 924 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Lire1P11260 Gm20674-201ENSMUST00000177452 369 ntBASIC4.79□□□□□ -1.64
Lire1P11260 Scgb2b21-201ENSMUST00000185407 520 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Lire1P11260 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.79□□□□□ -1.64
Lire1P11260 4930521E06Rik-201ENSMUST00000186732 905 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
Lire1P11260 Ighv1-3-201ENSMUST00000192764 302 ntBASIC4.79□□□□□ -1.64
Lire1P11260 Trbv28-201ENSMUST00000192804 264 ntBASIC4.79□□□□□ -1.64
Lire1P11260 Gm38108-201ENSMUST00000193891 399 ntTSL 5 BASIC4.79□□□□□ -1.64
Lire1P11260 7420461P10Rik-203ENSMUST00000193898 545 ntAPPRIS ALT2 TSL 3 BASIC4.79□□□□□ -1.64
Lire1P11260 Gm37882-201ENSMUST00000195254 196 ntBASIC4.79□□□□□ -1.64
Lire1P11260 Gm42610-201ENSMUST00000196557 650 ntTSL 3 BASIC4.79□□□□□ -1.64
Lire1P11260 Gm42694-201ENSMUST00000196951 358 ntBASIC4.79□□□□□ -1.64
Lire1P11260 Trav7d-5-201ENSMUST00000197128 340 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Lire1P11260 Trav7n-5-201ENSMUST00000199753 340 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Lire1P11260 Gm43631-201ENSMUST00000202011 369 ntBASIC4.79□□□□□ -1.64
Lire1P11260 Gm44673-201ENSMUST00000205692 996 ntBASIC4.79□□□□□ -1.64
Lire1P11260 CAAA01052029.1-201ENSMUST00000218410 271 ntBASIC4.79□□□□□ -1.64
Lire1P11260 Pah-204ENSMUST00000219813 789 ntTSL 3 BASIC4.79□□□□□ -1.64
Lire1P11260 Gm17177-202ENSMUST00000222007 990 ntTSL 5 BASIC4.79□□□□□ -1.64
Lire1P11260 Prl3b1-201ENSMUST00000035273 879 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lire1P11260 Anapc13-201ENSMUST00000038673 411 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
Lire1P11260 C130073F10Rik-201ENSMUST00000051043 913 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
Lire1P11260 Olfr1302-201ENSMUST00000054004 948 ntAPPRIS P2 BASIC4.79□□□□□ -1.64
Lire1P11260 Olfr787-201ENSMUST00000077836 939 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
Lire1P11260 Usf3-204ENSMUST00000169582 12604 ntAPPRIS P2 TSL 5 BASIC4.79□□□□□ -1.64
Lire1P11260 Gm36969-201ENSMUST00000194551 2809 ntBASIC4.79□□□□□ -1.64
Lire1P11260 AC158921.1-201ENSMUST00000227861 3468 ntBASIC4.79□□□□□ -1.64
Lire1P11260 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
Lire1P11260 Gm45129-201ENSMUST00000208444 2224 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Gm10811-201ENSMUST00000221985 2448 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lire1P11260 Gm28441-201ENSMUST00000190927 1343 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Lire1P11260 AC120153.1-201ENSMUST00000226502 1311 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Gm37964-201ENSMUST00000192459 4905 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Olfr548-ps1-202ENSMUST00000210064 4287 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Lire1P11260 Gm24578-201ENSMUST00000103970 129 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Gm17193-201ENSMUST00000116345 691 ntTSL 5 BASIC4.78□□□□□ -1.64
Lire1P11260 Gm15670-201ENSMUST00000117740 447 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Gm15754-201ENSMUST00000119191 478 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Gm12287-201ENSMUST00000119770 707 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Gm7973-201ENSMUST00000122107 488 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Gm12162-201ENSMUST00000123422 154 ntTSL 5 BASIC4.78□□□□□ -1.64
Lire1P11260 Gm12701-201ENSMUST00000134206 659 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Lire1P11260 Gm16345-201ENSMUST00000146065 158 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Gm22885-201ENSMUST00000157410 107 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Olfr723-201ENSMUST00000164157 1006 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Lire1P11260 Gm20519-201ENSMUST00000173684 359 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Gm21882-201ENSMUST00000178332 1083 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Lire1P11260 1500015L24Rik-202ENSMUST00000179640 780 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Lire1P11260 Gm8993-201ENSMUST00000182182 983 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Mir7012-201ENSMUST00000183900 64 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Gm29474-201ENSMUST00000187688 379 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Gm34176-201ENSMUST00000192621 474 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Gm37336-202ENSMUST00000193705 468 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Gm43569-201ENSMUST00000196200 559 ntTSL 3 BASIC4.78□□□□□ -1.64
Lire1P11260 Nts-201ENSMUST00000020040 1248 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lire1P11260 Gm43629-201ENSMUST00000201782 704 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Gm8719-201ENSMUST00000203602 534 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Olfr723-202ENSMUST00000206058 1078 ntAPPRIS P1 TSL 3 BASIC4.78□□□□□ -1.64
Lire1P11260 Glud-ps-201ENSMUST00000206310 657 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Gm44919-201ENSMUST00000208587 1073 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Olfr125-202ENSMUST00000213857 3835 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Lire1P11260 CT025665.1-201ENSMUST00000215251 1199 ntBASIC4.78□□□□□ -1.64
Lire1P11260 AC165283.1-201ENSMUST00000223390 307 ntBASIC4.78□□□□□ -1.64
Lire1P11260 AC134860.4-201ENSMUST00000223592 978 ntBASIC4.78□□□□□ -1.64
Lire1P11260 CT010486.1-201ENSMUST00000224609 422 ntBASIC4.78□□□□□ -1.64
Lire1P11260 1700129C05Rik-201ENSMUST00000022548 1067 ntAPPRIS P2 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lire1P11260 AC117949.2-201ENSMUST00000225900 584 ntBASIC4.78□□□□□ -1.64
Lire1P11260 AC165953.1-201ENSMUST00000226386 357 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Lire1P11260 Olfr850-201ENSMUST00000077347 948 ntAPPRIS P2 BASIC4.78□□□□□ -1.64
Lire1P11260 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lire1P11260 Gm9386-201ENSMUST00000095195 381 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Gm40909-202ENSMUST00000223275 5564 ntTSL 5 BASIC4.78□□□□□ -1.64
Lire1P11260 Gm2824-202ENSMUST00000180955 3522 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Lire1P11260 Gm43374-201ENSMUST00000202498 2391 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Gm37051-201ENSMUST00000194535 2943 ntBASIC4.78□□□□□ -1.64
Lire1P11260 Gm5570-202ENSMUST00000101355 2527 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Lire1P11260 Olfr1305-203ENSMUST00000213737 1775 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Lire1P11260 Vmn1r195-202ENSMUST00000228711 3056 ntAPPRIS P1 BASIC4.78□□□□□ -1.64
Lire1P11260 Fsd1l-207ENSMUST00000180164 7340 ntAPPRIS ALT1 TSL 5 BASIC4.78□□□□□ -1.64
Lire1P11260 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
Lire1P11260 Olfr689-202ENSMUST00000215413 5819 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
Lire1P11260 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
Lire1P11260 Btbd35f13-201ENSMUST00000177912 1701 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
Lire1P11260 Klhl13-201ENSMUST00000035973 2996 ntTSL 5 BASIC4.77□□□□□ -1.65
Lire1P11260 Gm13912-201ENSMUST00000156541 1860 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Lire1P11260 Nlrp4g-201ENSMUST00000067621 2030 ntBASIC4.77□□□□□ -1.65
Lire1P11260 4933423P22Rik-201ENSMUST00000126219 4595 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
Lire1P11260 Gm23274-201ENSMUST00000104056 130 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
Lire1P11260 Mup2-202ENSMUST00000107490 761 ntAPPRIS P1 TSL 2 BASIC4.77□□□□□ -1.65
Lire1P11260 Gm15120-201ENSMUST00000120602 301 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Gm13484-201ENSMUST00000120738 412 ntBASIC4.77□□□□□ -1.65
Lire1P11260 Gm15885-201ENSMUST00000122114 388 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 73.4 ms