Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Cxcr6-202ENSMUST00000216072 1907 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Olfr75-ps1-203ENSMUST00000144832 2655 ntTSL 2 BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm26300-201ENSMUST00000102282 94 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm25345-201ENSMUST00000104505 133 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm24069-201ENSMUST00000104512 127 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm13641-201ENSMUST00000117993 473 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm13785-201ENSMUST00000119099 690 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm12850-201ENSMUST00000119210 436 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm14115-201ENSMUST00000119242 482 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm16100-201ENSMUST00000120489 231 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm14925-201ENSMUST00000120611 438 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm13214-201ENSMUST00000122137 408 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Hmgb4os-201ENSMUST00000131581 518 ntTSL 5 BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm15485-201ENSMUST00000149095 258 ntTSL 3 BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm24225-201ENSMUST00000158825 98 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Fth-ps2-201ENSMUST00000168364 516 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm25873-201ENSMUST00000180317 107 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm26923-201ENSMUST00000182615 996 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm29586-201ENSMUST00000185225 1104 ntTSL 5 BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm18802-201ENSMUST00000186270 888 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm29178-203ENSMUST00000186312 1104 ntTSL 5 BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm29624-202ENSMUST00000190185 1104 ntTSL 5 BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm29179-209ENSMUST00000190621 1100 ntTSL 5 BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm37503-201ENSMUST00000192088 319 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm9227-201ENSMUST00000194733 566 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm5694-201ENSMUST00000195648 641 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Igkv15-97-201ENSMUST00000197637 339 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 4930518I17Rik-201ENSMUST00000203902 656 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Olfr717-ps1-201ENSMUST00000205589 556 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm45267-201ENSMUST00000211028 522 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm7570-201ENSMUST00000215246 698 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 4930591E09Rik-201ENSMUST00000215643 480 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 AC125041.1-201ENSMUST00000218264 876 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm32172-201ENSMUST00000220029 633 ntTSL 1 (best) BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm8672-201ENSMUST00000221200 332 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 CT030704.1-201ENSMUST00000227521 699 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 AC170810.1-201ENSMUST00000228267 672 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Olfr736-201ENSMUST00000058965 939 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Wdr83os-201ENSMUST00000079764 922 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm25079-201ENSMUST00000082529 203 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 n-R5s37-201ENSMUST00000082533 118 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm22265-201ENSMUST00000082947 116 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm26107-201ENSMUST00000083972 107 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Olfr1254-201ENSMUST00000099764 945 ntAPPRIS P1 BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm15337-201ENSMUST00000135378 3888 ntTSL 5 BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Trim30b-201ENSMUST00000106831 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Dnah2-202ENSMUST00000108659 13704 ntAPPRIS P2 TSL 5 BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm19335-201ENSMUST00000195836 2069 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Nlrp4a-202ENSMUST00000119386 3215 ntAPPRIS P2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm42496-201ENSMUST00000197976 3241 ntBASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Zzz3-201ENSMUST00000089982 4197 ntAPPRIS ALT2 TSL 1 (best) BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Cyp2c38-201ENSMUST00000035488 2869 ntAPPRIS P1 TSL 1 (best) BASIC5.17□□□□□ -1.58
Pcdh1F7BJK1 Gm6215-201ENSMUST00000119297 1386 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm7905-201ENSMUST00000119933 1386 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm6207-201ENSMUST00000120075 1386 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm6228-201ENSMUST00000178856 1386 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm6221-201ENSMUST00000180064 1386 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm26608-202ENSMUST00000181503 1362 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Clk1-201ENSMUST00000034868 1796 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Tor1aip2-203ENSMUST00000097526 2589 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Olfr877-202ENSMUST00000213956 2761 ntAPPRIS P1 TSL 5 BASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Olfr390-202ENSMUST00000120081 3604 ntAPPRIS P1 TSL 2 BASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm37101-201ENSMUST00000191656 3660 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Dach2-204ENSMUST00000113380 2894 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Pax6os1-202ENSMUST00000149133 1464 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 AW551984-202ENSMUST00000119722 4224 ntAPPRIS P1 TSL 1 (best) BASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Igkv4-50-201ENSMUST00000103363 352 ntAPPRIS P1 BASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Iglv2-201ENSMUST00000103752 348 ntAPPRIS ALT2 BASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Prdx2-rs3-201ENSMUST00000117259 594 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Eif3s6-ps1-201ENSMUST00000117907 470 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm11322-201ENSMUST00000118095 435 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm6893-201ENSMUST00000118385 522 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm14835-201ENSMUST00000119039 315 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Tpt1-ps1-201ENSMUST00000120257 436 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm16016-201ENSMUST00000120831 550 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm12732-201ENSMUST00000121688 180 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm12488-201ENSMUST00000122449 499 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Hmcn1-202ENSMUST00000137197 16554 ntTSL 5 BASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Serpina3e-ps-201ENSMUST00000165968 1228 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Hmgb1-ps7-201ENSMUST00000173370 648 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm25451-201ENSMUST00000177832 121 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm7173-203ENSMUST00000179788 1254 ntTSL 5 BASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm5527-201ENSMUST00000179821 642 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm17946-201ENSMUST00000186856 538 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm10193-201ENSMUST00000188288 231 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Lax1-202ENSMUST00000189524 628 ntTSL 2 BASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm18444-201ENSMUST00000191239 629 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm20162-201ENSMUST00000193629 871 ntBASIC5.16□□□□□ -1.58
Pcdh1F7BJK1 Gm42539-201ENSMUST00000197009 308 ntBASIC5.16□□□□□ -1.58
Retrieved 100 of 76,532 protein–RNA pairs in 78.6 ms