Protein–RNA interactions for Protein: Q9CY97

Ssu72, RNA polymerase II subunit A C-terminal domain phosphatase SSU72, mousemouse

Known RBP Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssu72Q9CY97 Cntnap5c-201ENSMUST00000076038 3931 ntAPPRIS P1 TSL 2 BASIC5.65□□□□□ -1.51
Ssu72Q9CY97 Gm43302-201ENSMUST00000050011 4310 ntAPPRIS P1 TSL 1 (best) BASIC5.65□□□□□ -1.51
Ssu72Q9CY97 Gm37738-201ENSMUST00000192396 4716 ntBASIC5.65□□□□□ -1.51
Ssu72Q9CY97 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Larp4-201ENSMUST00000057632 6527 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Zfp945-201ENSMUST00000088696 4285 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm43886-201ENSMUST00000205039 2386 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm20125-201ENSMUST00000185722 3201 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Il1rapl2-201ENSMUST00000075471 2061 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Nebl-213ENSMUST00000177966 1690 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 B020004J07Rik-201ENSMUST00000084386 1695 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Klra3-202ENSMUST00000111998 1238 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Vmn1r-ps112-201ENSMUST00000117475 544 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm14784-201ENSMUST00000121604 663 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm13368-201ENSMUST00000122443 430 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm25291-201ENSMUST00000122795 144 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 0610043K17Rik-202ENSMUST00000142581 372 ntTSL 2 BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Stau2-208ENSMUST00000144138 585 ntTSL 5 BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Fcf1-202ENSMUST00000171040 731 ntTSL 3 BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm4152-201ENSMUST00000172675 259 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm20777-201ENSMUST00000177818 699 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm20773-201ENSMUST00000178940 681 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm20873-201ENSMUST00000179410 699 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm20737-201ENSMUST00000179665 699 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm21310-201ENSMUST00000180130 699 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm21425-201ENSMUST00000180318 699 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Mrgprb12-ps-201ENSMUST00000186150 949 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm28974-201ENSMUST00000187893 231 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Mrgpra18-ps-201ENSMUST00000188059 907 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Krtdap-205ENSMUST00000189673 345 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm19029-201ENSMUST00000189923 564 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm33973-201ENSMUST00000195148 534 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm43388-201ENSMUST00000197818 1225 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Ltf-209ENSMUST00000198884 616 ntTSL 5 BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm44147-201ENSMUST00000204658 94 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm44163-201ENSMUST00000205140 475 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm45823-201ENSMUST00000212714 515 ntTSL 5 BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm18252-202ENSMUST00000214886 409 ntTSL 5 BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm20304-201ENSMUST00000218168 444 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 AC155941.1-201ENSMUST00000220223 529 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm7712-201ENSMUST00000222214 337 ntTSL 5 BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm7042-201ENSMUST00000223027 384 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 AC160980.2-201ENSMUST00000225131 949 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 AC154436.2-201ENSMUST00000227408 208 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 AC135086.1-201ENSMUST00000228621 817 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Olfr1497-201ENSMUST00000061993 945 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Rybp-ps-201ENSMUST00000069489 681 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Olfr777-201ENSMUST00000080313 936 ntAPPRIS P1 BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm6853-202ENSMUST00000211360 4375 ntTSL 5 BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Hbp1-204ENSMUST00000175686 1315 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm5653-201ENSMUST00000223393 1337 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm37606-201ENSMUST00000191816 3116 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Pls3-202ENSMUST00000114057 3160 ntAPPRIS P1 TSL 1 (best) BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm37212-201ENSMUST00000192582 3650 ntBASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Iqcb1-202ENSMUST00000114819 2797 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Olfr97-205ENSMUST00000214848 1861 ntAPPRIS P1 TSL 5 BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Tspan7-202ENSMUST00000115526 7067 ntTSL 1 (best) BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 AC133498.1-201ENSMUST00000222871 2925 ntTSL 5 BASIC5.64□□□□□ -1.51
Ssu72Q9CY97 Gm44676-201ENSMUST00000208520 3055 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Rfx6-201ENSMUST00000050455 3088 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Gm3675-201ENSMUST00000175904 1653 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Gm35842-201ENSMUST00000207859 4464 ntTSL 5 BASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Lrriq3-202ENSMUST00000192383 1717 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Eif2s2-205ENSMUST00000166171 2312 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Vps13d-201ENSMUST00000020441 15665 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Gm43745-201ENSMUST00000198085 1883 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Ros1-202ENSMUST00000218452 6960 ntAPPRIS ALT2 TSL 5 BASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Mir683-2-201ENSMUST00000102099 109 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Gm23431-201ENSMUST00000104006 107 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Gm24869-201ENSMUST00000104072 128 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Gm24608-201ENSMUST00000104381 136 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Fxyd1-203ENSMUST00000108110 492 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Rps24-201ENSMUST00000112384 468 ntAPPRIS ALT1 TSL 5 BASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Gm4758-201ENSMUST00000114851 291 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Gm11878-201ENSMUST00000117908 400 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Gm15399-201ENSMUST00000118055 724 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Rps24-ps3-201ENSMUST00000118723 402 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Gm14392-201ENSMUST00000120332 401 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Crem-235ENSMUST00000154705 529 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Gm23233-201ENSMUST00000157301 137 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Gm20701-201ENSMUST00000176082 347 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Gm22420-201ENSMUST00000178795 126 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Mir683-1-201ENSMUST00000179371 109 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Gm3428-201ENSMUST00000183450 521 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Scgb2b33-201ENSMUST00000187413 334 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Gm2053-201ENSMUST00000195671 631 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Obox4-ps32-201ENSMUST00000196512 537 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Igkv12-67-201ENSMUST00000197806 354 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Gm43018-201ENSMUST00000198075 1275 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Gm43142-201ENSMUST00000198670 361 ntBASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Gm44730-201ENSMUST00000205902 716 ntTSL 3 BASIC5.63□□□□□ -1.51
Ssu72Q9CY97 Gm44970-201ENSMUST00000206318 314 ntTSL 3 BASIC5.63□□□□□ -1.51
Ssu72Q9CY97 4933430N04Rik-202ENSMUST00000208031 1146 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
Retrieved 100 of 76,532 protein–RNA pairs in 105.5 ms