Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm43467-201ENSMUST00000197441 437 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm42880-201ENSMUST00000198028 459 ntTSL 3 BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm45149-201ENSMUST00000206459 2172 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm18467-201ENSMUST00000208805 434 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm46234-201ENSMUST00000218702 259 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 AC155941.1-201ENSMUST00000220223 529 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm10095-201ENSMUST00000222765 483 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 AC119241.1-201ENSMUST00000223651 534 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 AC090496.1-201ENSMUST00000226020 260 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 AC117588.3-201ENSMUST00000228517 325 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 AC154738.7-201ENSMUST00000228606 579 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Nckap5-201ENSMUST00000057846 5334 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Olfr1193-201ENSMUST00000081697 957 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm23627-201ENSMUST00000082459 107 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm22502-201ENSMUST00000082488 107 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm24149-201ENSMUST00000082757 107 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm24041-201ENSMUST00000083115 156 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Mir325-201ENSMUST00000083491 98 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm94-201ENSMUST00000096570 748 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Cep57l1-204ENSMUST00000186239 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Hspd1-ps1-201ENSMUST00000203513 1670 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Olfr845-202ENSMUST00000213344 3530 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Olfr1000-202ENSMUST00000213837 1915 ntAPPRIS P1 TSL 3 BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Abca4-207ENSMUST00000141135 3606 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Vrk2-202ENSMUST00000109504 1642 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Smgc-202ENSMUST00000100293 2878 ntAPPRIS ALT2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 P2ry12-201ENSMUST00000050360 2250 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Arhgap32-203ENSMUST00000174641 13568 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Mybpc1-202ENSMUST00000121629 3922 ntAPPRIS P3 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm30570-201ENSMUST00000213553 2651 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Zfp457-201ENSMUST00000049705 2117 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm40987-202ENSMUST00000221856 1588 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Atm-201ENSMUST00000118282 10006 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Irgm2-202ENSMUST00000108836 3459 ntAPPRIS P2 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 9330111N05Rik-201ENSMUST00000180409 1407 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm38451-201ENSMUST00000208329 2646 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Ranbp3l-201ENSMUST00000053308 3017 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Ighv8-12-201ENSMUST00000103540 315 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm25917-201ENSMUST00000104267 130 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Scimp-202ENSMUST00000108534 1080 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm14050-201ENSMUST00000117052 346 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 1700109G15Rik-201ENSMUST00000150735 384 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm23553-201ENSMUST00000157817 295 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm22085-201ENSMUST00000158344 110 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm16028-201ENSMUST00000162347 890 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm5218-201ENSMUST00000172270 465 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm24818-201ENSMUST00000175093 161 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm24407-201ENSMUST00000177864 141 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm21788-201ENSMUST00000177878 543 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm25670-201ENSMUST00000178423 107 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm26239-201ENSMUST00000178842 107 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm24267-201ENSMUST00000179841 107 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm25939-201ENSMUST00000179876 191 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm27193-201ENSMUST00000184217 586 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm27210-201ENSMUST00000184263 402 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm10105-201ENSMUST00000184601 270 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm29069-201ENSMUST00000185857 675 ntTSL 3 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm28840-203ENSMUST00000187128 975 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm37774-201ENSMUST00000194401 245 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 1700001N15Rik-201ENSMUST00000199380 482 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm43688-201ENSMUST00000202249 310 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm2762-205ENSMUST00000202366 356 ntTSL 3 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm8039-201ENSMUST00000204758 712 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 1700011C11Rik-201ENSMUST00000205268 365 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm34350-201ENSMUST00000208898 481 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm6012-201ENSMUST00000210821 730 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm45402-201ENSMUST00000211796 223 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm8106-201ENSMUST00000213123 523 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 AC160863.2-201ENSMUST00000218392 858 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 AC153357.1-201ENSMUST00000219190 482 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 AC159205.4-201ENSMUST00000225964 704 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Olfr1336-201ENSMUST00000056120 945 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Olfr481-201ENSMUST00000067143 939 ntAPPRIS P1 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm24292-201ENSMUST00000082888 107 ntBASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm3604-201ENSMUST00000107989 1677 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Zranb2-202ENSMUST00000106057 2737 ntAPPRIS ALT2 TSL 5 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Pkn2-210ENSMUST00000174422 2904 ntTSL 5 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm26791-201ENSMUST00000180942 1605 ntTSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Gm43638-201ENSMUST00000201519 2297 ntAPPRIS P1 TSL 5 BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Tlr4-201ENSMUST00000048096 4077 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Ddr2-205ENSMUST00000194690 8590 ntAPPRIS P1 TSL 1 (best) BASIC6.79□□□□□ -1.32
Trim47Q8C0E3 Slfn4-203ENSMUST00000215472 1830 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Prrc2c-209ENSMUST00000182593 9022 ntAPPRIS ALT2 TSL 5 BASIC6.78□□□□□ -1.32
Trim47Q8C0E3 AC022775.1-201ENSMUST00000228163 2698 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Gm44587-201ENSMUST00000207399 1685 ntBASIC6.78□□□□□ -1.32
Trim47Q8C0E3 Ncoa6-201ENSMUST00000043126 6872 ntAPPRIS P2 TSL 1 (best) BASIC6.78□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 69.3 ms