Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Btbd35f4-201ENSMUST00000105011 1491 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Lair1-202ENSMUST00000086400 3461 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Ercc6l-201ENSMUST00000056904 5302 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gulp1-206ENSMUST00000162600 2798 ntTSL 5 BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Vmn1r203-203ENSMUST00000228889 8213 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm13119-201ENSMUST00000094526 2094 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm20449-201ENSMUST00000094532 3847 ntAPPRIS P1 TSL 2 BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Mageb5-201ENSMUST00000082048 1357 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 1700017N19Rik-201ENSMUST00000041162 1691 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr1062-203ENSMUST00000217481 3726 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Hmmr-201ENSMUST00000020579 3892 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Heph-202ENSMUST00000079322 3904 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Traj46-201ENSMUST00000103696 63 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm14529-201ENSMUST00000117894 406 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm14867-201ENSMUST00000120156 866 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm14805-201ENSMUST00000120172 340 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm15237-201ENSMUST00000122104 469 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Il2ra-202ENSMUST00000150890 1013 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm24719-201ENSMUST00000157520 110 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm22842-201ENSMUST00000157709 118 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm23030-201ENSMUST00000158004 273 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm24737-201ENSMUST00000158861 100 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm16161-201ENSMUST00000162239 290 ntTSL 2 BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Erap1-201ENSMUST00000169114 5644 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm20401-201ENSMUST00000173717 212 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm23141-201ENSMUST00000178682 94 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Mir7235-201ENSMUST00000183796 56 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Mir7037-201ENSMUST00000184414 65 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm3428-202ENSMUST00000184555 416 ntTSL 5 BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Mir6952-201ENSMUST00000185092 61 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm18667-201ENSMUST00000186523 484 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm28141-201ENSMUST00000186676 342 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Tardbp-223ENSMUST00000189048 1096 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm18698-201ENSMUST00000192327 668 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm38137-201ENSMUST00000193735 1401 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm9057-201ENSMUST00000198791 296 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm42886-201ENSMUST00000199214 466 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm8041-201ENSMUST00000199755 616 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm5318-201ENSMUST00000205249 406 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm6866-202ENSMUST00000206653 3081 ntTSL 5 BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm44959-201ENSMUST00000209127 231 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm19140-201ENSMUST00000209790 421 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm45387-201ENSMUST00000209792 632 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm45850-201ENSMUST00000212536 338 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm4510-201ENSMUST00000218265 427 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 AC153870.1-201ENSMUST00000219599 560 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 AC122905.2-201ENSMUST00000220325 269 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm17890-201ENSMUST00000221419 757 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 9130015A21Rik-201ENSMUST00000221491 651 ntTSL 2 BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm19195-201ENSMUST00000222018 511 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Ctag2-201ENSMUST00000033524 854 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr39-201ENSMUST00000071725 1098 ntTSL 2 BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm23851-201ENSMUST00000083831 103 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Zfp974-201ENSMUST00000098639 5158 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Gm9496-201ENSMUST00000191295 1601 ntBASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 AC141438.1-201ENSMUST00000216055 3205 ntTSL 2 BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 C87977-203ENSMUST00000105755 1802 ntAPPRIS ALT2 TSL 5 BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Atp8b5-202ENSMUST00000102953 2609 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Sh3rf1Q69ZI1 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Cav1-201ENSMUST00000007799 2522 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Pola1-201ENSMUST00000006856 5346 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Spata6-203ENSMUST00000084354 2239 ntTSL 5 BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Enox2-209ENSMUST00000167659 3632 ntTSL 5 BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm24275-201ENSMUST00000116780 146 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm13428-201ENSMUST00000117540 365 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm11352-201ENSMUST00000119264 517 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr408-ps1-201ENSMUST00000121710 941 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm14237-201ENSMUST00000122080 430 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 4933401B06Rik-201ENSMUST00000139758 1155 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Med9os-202ENSMUST00000139794 446 ntTSL 3 BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm16085-201ENSMUST00000144575 453 ntTSL 3 BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 1700047A11Rik-201ENSMUST00000144750 427 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 5730412P04Rik-201ENSMUST00000147100 1149 ntTSL 5 BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm23995-201ENSMUST00000158060 129 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm24901-201ENSMUST00000158125 110 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm16290-201ENSMUST00000161175 474 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Vmn2r-ps35-201ENSMUST00000169206 831 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm18953-201ENSMUST00000175694 300 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm23047-201ENSMUST00000177661 94 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Vmn2r-ps18-201ENSMUST00000177972 380 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm25944-201ENSMUST00000178758 94 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm22621-201ENSMUST00000179678 74 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm27252-201ENSMUST00000183782 689 ntTSL 5 BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm37243-201ENSMUST00000193407 595 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm37773-201ENSMUST00000194141 2120 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm37774-201ENSMUST00000194401 245 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Ighv1-27-201ENSMUST00000194473 340 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm43669-201ENSMUST00000198229 436 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Gm44468-201ENSMUST00000199516 105 ntBASIC5.94□□□□□ -1.46
Sh3rf1Q69ZI1 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.94□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms