Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 4930556G01Rik-201ENSMUST00000128925 891 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim28Q62318 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim28Q62318 Gm11274-201ENSMUST00000146857 481 ntTSL 2 BASIC6.24□□□□□ -1.41
Trim28Q62318 Gm24689-201ENSMUST00000157760 104 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 Gm24211-201ENSMUST00000158264 107 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 Olfr325-201ENSMUST00000169428 1065 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim28Q62318 Crxos-205ENSMUST00000171280 571 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim28Q62318 Gm22177-201ENSMUST00000175002 158 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 Scgb1b6-ps-201ENSMUST00000185337 199 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 Gm29185-201ENSMUST00000190578 516 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim28Q62318 Gm6366-201ENSMUST00000198766 826 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 Gm43841-201ENSMUST00000199491 586 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 Gm42663-201ENSMUST00000199883 351 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 Gm19596-201ENSMUST00000203685 739 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 Gm2522-201ENSMUST00000204280 322 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 Olfr778-ps1-201ENSMUST00000204517 207 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 Gm18258-201ENSMUST00000210413 542 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 Gm45382-201ENSMUST00000210607 151 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 AC102435.1-205ENSMUST00000221064 1097 ntTSL 5 BASIC6.24□□□□□ -1.41
Trim28Q62318 AC122937.1-201ENSMUST00000226405 793 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 n-R5s3-201ENSMUST00000083879 112 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 Gm22350-201ENSMUST00000083924 156 ntBASIC6.24□□□□□ -1.41
Trim28Q62318 Olfr988-201ENSMUST00000099928 1076 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim28Q62318 Fpgt-201ENSMUST00000066568 3518 ntAPPRIS P1 TSL 1 (best) BASIC6.24□□□□□ -1.41
Trim28Q62318 Cep112os1-201ENSMUST00000137907 3005 ntTSL 1 (best) BASIC6.24□□□□□ -1.41
Trim28Q62318 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC6.24□□□□□ -1.41
Trim28Q62318 Vmn1r79-202ENSMUST00000226953 5636 ntAPPRIS P1 BASIC6.24□□□□□ -1.41
Trim28Q62318 Vmn1r218-205ENSMUST00000227741 9624 ntAPPRIS ALT2 BASIC6.24□□□□□ -1.41
Trim28Q62318 Olfr824-202ENSMUST00000214192 3862 ntAPPRIS P1 TSL 5 BASIC6.24□□□□□ -1.41
Trim28Q62318 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim28Q62318 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim28Q62318 Fmo2-201ENSMUST00000045902 4066 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim28Q62318 Gm37114-201ENSMUST00000195065 1804 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Neb-201ENSMUST00000028320 10298 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim28Q62318 CT009696.3-201ENSMUST00000215342 2184 ntTSL 3 BASIC6.23□□□□□ -1.41
Trim28Q62318 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim28Q62318 Olfr998-202ENSMUST00000215083 1399 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trim28Q62318 Tas2r122-201ENSMUST00000105077 930 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim28Q62318 Gm14878-201ENSMUST00000118167 293 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Gm11633-201ENSMUST00000118176 444 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Gm2318-201ENSMUST00000119623 639 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Sult2a-ps1-201ENSMUST00000120317 341 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Mup-ps13-201ENSMUST00000120662 545 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Mup-ps1-201ENSMUST00000120720 544 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Crem-219ENSMUST00000140332 1015 ntTSL 5 BASIC6.23□□□□□ -1.41
Trim28Q62318 Gm13662-201ENSMUST00000157059 712 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim28Q62318 Gm23385-201ENSMUST00000158592 295 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Gm17377-201ENSMUST00000165184 207 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Olfr757-ps1-201ENSMUST00000172798 413 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Gm7438-201ENSMUST00000177664 639 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Gm7408-201ENSMUST00000178014 639 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Gm7386-201ENSMUST00000178020 639 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Gm3657-201ENSMUST00000178170 639 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Gm7415-201ENSMUST00000178205 639 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Gm7398-201ENSMUST00000178589 639 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Gm7391-201ENSMUST00000178680 639 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Ear1-202ENSMUST00000179200 519 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim28Q62318 Gm7375-201ENSMUST00000179232 639 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Gm3681-201ENSMUST00000179940 639 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Gm27568-201ENSMUST00000184220 99 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 4930558C23Rik-201ENSMUST00000196239 731 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim28Q62318 Gm4410-201ENSMUST00000199349 686 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Gm43487-201ENSMUST00000200331 1031 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Klk1b23-ps-201ENSMUST00000206347 345 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC6.23□□□□□ -1.41
Trim28Q62318 Gm45157-201ENSMUST00000208729 401 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Gm45789-201ENSMUST00000213038 364 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 AC156795.1-201ENSMUST00000214655 414 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Gm5374-201ENSMUST00000222868 657 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 AC140393.2-201ENSMUST00000226894 943 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Vmn1r89-201ENSMUST00000053008 951 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Trim28Q62318 Rpl21-ps4-201ENSMUST00000080237 438 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Gm25147-201ENSMUST00000083030 105 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Mup3-201ENSMUST00000084531 938 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim28Q62318 Gm5152-202ENSMUST00000088625 417 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trim28Q62318 Olfr1188-201ENSMUST00000090701 968 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Trim28Q62318 n-R5s152-201ENSMUST00000093641 119 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 n-R5s27-201ENSMUST00000093699 119 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Impg1-201ENSMUST00000085289 3356 ntAPPRIS ALT2 TSL 5 BASIC6.23□□□□□ -1.41
Trim28Q62318 AC122357.2-201ENSMUST00000220732 1525 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Trim28Q62318 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim28Q62318 Zfp426-213ENSMUST00000169558 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim28Q62318 Phc3-209ENSMUST00000168645 10976 ntAPPRIS P3 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim28Q62318 Olfr535-204ENSMUST00000214296 5120 ntAPPRIS P1 TSL 5 BASIC6.23□□□□□ -1.41
Trim28Q62318 Gm43528-201ENSMUST00000199492 1674 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Gm44624-201ENSMUST00000208700 2278 ntBASIC6.23□□□□□ -1.41
Trim28Q62318 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC6.23□□□□□ -1.41
Trim28Q62318 Vmn1r39-201ENSMUST00000226217 2258 ntAPPRIS P2 BASIC6.23□□□□□ -1.41
Trim28Q62318 Vmn1r39-205ENSMUST00000228008 2283 ntAPPRIS ALT2 BASIC6.23□□□□□ -1.41
Trim28Q62318 Gabrg2-203ENSMUST00000109290 2868 ntTSL 1 (best) BASIC6.23□□□□□ -1.41
Trim28Q62318 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Trim28Q62318 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Tinag-201ENSMUST00000034911 1726 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim28Q62318 Olfr986-204ENSMUST00000218134 3487 ntAPPRIS P1 TSL 5 BASIC6.22□□□□□ -1.41
Trim28Q62318 Xcr1-201ENSMUST00000182350 4453 ntAPPRIS P1 TSL 1 (best) BASIC6.22□□□□□ -1.41
Trim28Q62318 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC6.22□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 81.6 ms