Protein–RNA interactions for Protein: Q3ULL6

Upf3b, UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

Predictions only

Length 472 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3bQ3ULL6 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC4.66□□□□□ -1.66
Upf3bQ3ULL6 Gm34609-201ENSMUST00000219284 789 ntTSL 5 BASIC4.66□□□□□ -1.66
Upf3bQ3ULL6 Gm46401-202ENSMUST00000223425 803 ntTSL 5 BASIC4.66□□□□□ -1.66
Upf3bQ3ULL6 AC117237.1-201ENSMUST00000224035 395 ntBASIC4.66□□□□□ -1.66
Upf3bQ3ULL6 Olfr218-201ENSMUST00000057548 942 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Upf3bQ3ULL6 Olfr229-201ENSMUST00000076802 924 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Upf3bQ3ULL6 Polk-202ENSMUST00000091387 2382 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Upf3bQ3ULL6 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
Upf3bQ3ULL6 Macc1-205ENSMUST00000222784 4710 ntAPPRIS P1 TSL 5 BASIC4.66□□□□□ -1.66
Upf3bQ3ULL6 Olfr1223-201ENSMUST00000217342 2333 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
Upf3bQ3ULL6 Mga-203ENSMUST00000110773 13577 ntAPPRIS ALT2 TSL 5 BASIC4.66□□□□□ -1.66
Upf3bQ3ULL6 Gm38032-201ENSMUST00000195052 1589 ntBASIC4.65□□□□□ -1.66
Upf3bQ3ULL6 Olfr364-ps1-201ENSMUST00000104995 1766 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.66
Upf3bQ3ULL6 Gm18954-201ENSMUST00000222200 1792 ntBASIC4.65□□□□□ -1.66
Upf3bQ3ULL6 Gpm6a-201ENSMUST00000033915 3215 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Upf3bQ3ULL6 Gm13757-201ENSMUST00000126038 4460 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.66
Upf3bQ3ULL6 Gm43781-201ENSMUST00000197634 2681 ntBASIC4.65□□□□□ -1.66
Upf3bQ3ULL6 Vmn1r185-212ENSMUST00000228633 5385 ntAPPRIS P1 BASIC4.65□□□□□ -1.66
Upf3bQ3ULL6 AC120375.2-201ENSMUST00000226532 1853 ntBASIC4.65□□□□□ -1.66
Upf3bQ3ULL6 Cd86-201ENSMUST00000089620 2539 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Upf3bQ3ULL6 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.66
Upf3bQ3ULL6 Trbv20-201ENSMUST00000103277 335 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Gm24469-201ENSMUST00000104487 131 ntBASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Gm15385-201ENSMUST00000118725 667 ntBASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Gm13785-201ENSMUST00000119099 690 ntBASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Gm11448-201ENSMUST00000120427 450 ntBASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 A930041C12Rik-201ENSMUST00000149156 537 ntTSL 1 (best) BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Malat1-203ENSMUST00000173499 485 ntTSL 3 BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Gm18100-201ENSMUST00000200897 452 ntBASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Gm3148-201ENSMUST00000203594 612 ntBASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Gm44002-201ENSMUST00000205134 594 ntBASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Olfr747-202ENSMUST00000205373 1132 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 AC123944.2-201ENSMUST00000215290 382 ntBASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Olfr32-205ENSMUST00000215659 2998 ntAPPRIS P1 TSL 3 BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 3830406C13Rik-203ENSMUST00000223631 1014 ntBASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 AC139758.1-201ENSMUST00000226573 930 ntBASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Il2-201ENSMUST00000029275 1144 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Olfr25-201ENSMUST00000071449 1068 ntAPPRIS P2 BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 n-R5s162-201ENSMUST00000082581 119 ntBASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Gm23464-201ENSMUST00000083145 147 ntBASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Olfr491-202ENSMUST00000209545 1944 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Glra3-201ENSMUST00000000275 6508 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Svet1-201ENSMUST00000209370 3940 ntBASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 AI314180-203ENSMUST00000107557 4946 ntAPPRIS ALT2 TSL 1 (best) BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Gm45517-201ENSMUST00000209973 2468 ntBASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Olfr128-202ENSMUST00000216440 3644 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Gm43527-201ENSMUST00000198749 3178 ntBASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Gm28710-202ENSMUST00000211738 2987 ntAPPRIS P1 TSL 5 BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Ctsq-201ENSMUST00000021888 1378 ntAPPRIS P1 TSL 1 (best) BASIC4.65□□□□□ -1.67
Upf3bQ3ULL6 Vmn1r172-201ENSMUST00000038694 9009 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Gm21037-201ENSMUST00000209086 2608 ntBASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Neto2-201ENSMUST00000109686 5610 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 4930467D21Rik-201ENSMUST00000180634 2530 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Olfr1493-ps1-201ENSMUST00000207208 1777 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Gm14750-201ENSMUST00000118262 516 ntBASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Gm12311-201ENSMUST00000118803 374 ntBASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Gm14688-201ENSMUST00000119169 303 ntBASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Sult2a-ps2-201ENSMUST00000121135 405 ntBASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Gm12087-201ENSMUST00000121878 258 ntBASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Rrm2b-203ENSMUST00000137636 900 ntTSL 5 BASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Gm20954-201ENSMUST00000189078 644 ntBASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Gm43001-202ENSMUST00000199076 192 ntTSL 3 BASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Gm7439-201ENSMUST00000214053 835 ntBASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 CT030170.6-201ENSMUST00000221149 550 ntTSL 5 BASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 AC132324.1-201ENSMUST00000221855 584 ntTSL 5 BASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 BC048502-201ENSMUST00000065978 718 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Mir99a-201ENSMUST00000083596 65 ntBASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 n-R5s7-201ENSMUST00000083755 121 ntBASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 H2-M9-201ENSMUST00000087165 1125 ntTSL 1 (best) BASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Cdh10-201ENSMUST00000040562 3407 ntAPPRIS P1 TSL 1 (best) BASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Obox4-ps27-201ENSMUST00000179203 1362 ntBASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.64□□□□□ -1.67
Upf3bQ3ULL6 Cysltr1-202ENSMUST00000113480 5142 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Fam135a-206ENSMUST00000187369 4976 ntAPPRIS ALT2 TSL 5 BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Olfr788-202ENSMUST00000213222 4747 ntAPPRIS P1 TSL 5 BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Gm15226-201ENSMUST00000156526 2971 ntTSL 1 (best) BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Vmn2r89-202ENSMUST00000159734 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Gm28362-201ENSMUST00000189430 2420 ntBASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Gm14107-201ENSMUST00000117774 330 ntBASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Gm13550-201ENSMUST00000118185 525 ntBASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Gm15421-202ENSMUST00000118224 399 ntBASIC4.63□□□□□ -1.67
Upf3bQ3ULL6 Gm12514-202ENSMUST00000150455 699 ntTSL 5 BASIC4.63□□□□□ -1.67
Retrieved 100 of 76,532 protein–RNA pairs in 74.3 ms