Protein–RNA interactions for Protein: Q05722

Col9a1, Collagen alpha-1(IX) chain, mousemouse

Predictions only

Length 921 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1Q05722 St18-212ENSMUST00000151281 3533 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col9a1Q05722 Tcam1-201ENSMUST00000044462 3511 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col9a1Q05722 Olfr857-203ENSMUST00000217450 2271 ntTSL 3 BASIC6.74□□□□□ -1.33
Col9a1Q05722 Pramel4-203ENSMUST00000094520 2297 ntAPPRIS P2 TSL 2 BASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm3752-201ENSMUST00000164366 1817 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Col9a1Q05722 Qsox2-202ENSMUST00000091263 4011 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col9a1Q05722 Zcchc6-201ENSMUST00000071703 5869 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm12043-201ENSMUST00000131570 2788 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm23424-201ENSMUST00000103889 110 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm14220-201ENSMUST00000118114 449 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm15112-201ENSMUST00000120152 860 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm14298-201ENSMUST00000139032 237 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm16356-201ENSMUST00000143300 169 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm21973-201ENSMUST00000157020 358 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm23965-201ENSMUST00000157969 142 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm17490-201ENSMUST00000166779 63 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm3170-201ENSMUST00000168753 850 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm3348-201ENSMUST00000177813 850 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Nutf2-ps2-201ENSMUST00000179225 384 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Mdrl-201ENSMUST00000180483 1020 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm29227-201ENSMUST00000187139 315 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm29034-201ENSMUST00000188099 315 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm37129-201ENSMUST00000195791 315 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm43846-201ENSMUST00000200502 932 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Spcs2-205ENSMUST00000207580 868 ntTSL 5 BASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm34424-201ENSMUST00000213400 782 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm24454-201ENSMUST00000083349 132 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm22577-201ENSMUST00000083731 109 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 n-R5s58-201ENSMUST00000093682 119 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm9386-201ENSMUST00000095195 381 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm37520-201ENSMUST00000194883 2672 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Vmn2r11-201ENSMUST00000164875 2586 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Col9a1Q05722 Pfkfb1-202ENSMUST00000112713 1872 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Col9a1Q05722 AC159635.1-201ENSMUST00000220905 2102 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Etl4-206ENSMUST00000114608 6635 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Col9a1Q05722 Pramel4-202ENSMUST00000091676 2399 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col9a1Q05722 Tial1-211ENSMUST00000165023 2003 ntAPPRIS ALT1 TSL 5 BASIC6.74□□□□□ -1.33
Col9a1Q05722 Impa1-201ENSMUST00000065938 4185 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Col9a1Q05722 Nr3c2-202ENSMUST00000109911 3804 ntTSL 5 BASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm37789-201ENSMUST00000192862 2889 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Dock7-202ENSMUST00000075836 6704 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Col9a1Q05722 AC154347.1-201ENSMUST00000221358 3105 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 Gm42686-201ENSMUST00000199172 4108 ntBASIC6.74□□□□□ -1.33
Col9a1Q05722 AC140280.1-201ENSMUST00000227826 1847 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Olfr780-202ENSMUST00000215503 2910 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col9a1Q05722 G6pc2-202ENSMUST00000112317 1749 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm42544-201ENSMUST00000197868 3242 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Vmn1r54-202ENSMUST00000226921 3234 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Col9a1Q05722 Calcr-202ENSMUST00000115622 3721 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 Grik1-203ENSMUST00000114137 2894 ntTSL 5 BASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm12080-201ENSMUST00000119821 1883 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Evi2b-201ENSMUST00000179322 1858 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm44652-201ENSMUST00000208648 2854 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Erc1-201ENSMUST00000032279 8356 ntAPPRIS P2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 Zfp947-201ENSMUST00000080249 2872 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm10855-201ENSMUST00000100426 2541 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Pds5b-202ENSMUST00000038900 7315 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col9a1Q05722 Olfr523-205ENSMUST00000215785 4165 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col9a1Q05722 Mpzl3-203ENSMUST00000114664 3424 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 Olfr1364-202ENSMUST00000206526 2938 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Col9a1Q05722 Gbp3-202ENSMUST00000106221 2682 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 2810428J06Rik-201ENSMUST00000198336 2696 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Mir700-201ENSMUST00000102169 79 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm24867-201ENSMUST00000104161 107 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm24482-201ENSMUST00000117005 93 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm12442-201ENSMUST00000118372 338 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm12740-201ENSMUST00000118794 308 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm12721-201ENSMUST00000120621 268 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Olfr626-ps1-201ENSMUST00000121147 318 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm11925-201ENSMUST00000121375 535 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm22726-201ENSMUST00000158089 179 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm22389-201ENSMUST00000158193 301 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Csde1-211ENSMUST00000198180 3849 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm40293-201ENSMUST00000202596 485 ntTSL 3 BASIC6.73□□□□□ -1.33
Col9a1Q05722 AC153505.2-201ENSMUST00000217741 277 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm36758-201ENSMUST00000222594 310 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm26497-201ENSMUST00000083146 107 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm22744-201ENSMUST00000083444 65 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm22829-201ENSMUST00000083771 106 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm26164-201ENSMUST00000083793 104 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Zhx3-201ENSMUST00000103111 9563 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 Olfr374-202ENSMUST00000210435 8718 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Col9a1Q05722 Olfr360-202ENSMUST00000216706 1816 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm8844-201ENSMUST00000119460 2614 ntBASIC6.73□□□□□ -1.33
Col9a1Q05722 Cdon-201ENSMUST00000042842 7213 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC6.73□□□□□ -1.33
Col9a1Q05722 Arfgef1-203ENSMUST00000131556 3424 ntTSL 5 BASIC6.73□□□□□ -1.33
Col9a1Q05722 4932435O22Rik-202ENSMUST00000148405 3406 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 Itgae-202ENSMUST00000102537 3825 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 Ank3-208ENSMUST00000182029 3825 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 Brs3-201ENSMUST00000033464 2772 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 Mcm4-201ENSMUST00000023353 3589 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 Dclk1-202ENSMUST00000070418 7012 ntTSL 5 BASIC6.73□□□□□ -1.33
Col9a1Q05722 Fastkd1-202ENSMUST00000102706 2511 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Col9a1Q05722 D6Wsu163e-201ENSMUST00000032497 2501 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 Psma2-201ENSMUST00000170836 2911 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 Gm13986-202ENSMUST00000148587 3469 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 4930511M06Rik-203ENSMUST00000137603 2651 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Col9a1Q05722 Gcnt2-201ENSMUST00000067778 4038 ntAPPRIS P5 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 80.6 ms