Protein–RNA interactions for Protein: P28481

Col2a1, Collagen alpha-1(II) chain, mousemouse

Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col2a1P28481 Gm22588-201ENSMUST00000157510 140 ntBASIC4.84□□□□□ -1.63
Col2a1P28481 Gm26036-201ENSMUST00000158149 144 ntBASIC4.84□□□□□ -1.63
Col2a1P28481 Vmn1r23-201ENSMUST00000175817 997 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col2a1P28481 Gm27222-201ENSMUST00000183398 427 ntTSL 5 BASIC4.84□□□□□ -1.63
Col2a1P28481 Gm8820-201ENSMUST00000204077 571 ntBASIC4.84□□□□□ -1.63
Col2a1P28481 AC122305.2-201ENSMUST00000215148 834 ntBASIC4.84□□□□□ -1.63
Col2a1P28481 CT025523.1-201ENSMUST00000228318 694 ntBASIC4.84□□□□□ -1.63
Col2a1P28481 Olfr873-202ENSMUST00000075717 991 ntAPPRIS ALT2 TSL 2 BASIC4.84□□□□□ -1.63
Col2a1P28481 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col2a1P28481 Nlrp4e-201ENSMUST00000076470 3382 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.63
Col2a1P28481 Oxr1-202ENSMUST00000090095 4156 ntTSL 1 (best) BASIC4.84□□□□□ -1.63
Col2a1P28481 Btbd35f3-201ENSMUST00000140300 1943 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col2a1P28481 Btbd35f15-201ENSMUST00000186329 1917 ntAPPRIS P1 BASIC4.84□□□□□ -1.63
Col2a1P28481 Gm37262-201ENSMUST00000192816 1818 ntBASIC4.84□□□□□ -1.64
Col2a1P28481 Olfr1200-202ENSMUST00000217588 4996 ntAPPRIS P1 TSL 5 BASIC4.84□□□□□ -1.64
Col2a1P28481 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col2a1P28481 Cd226-201ENSMUST00000037142 2357 ntAPPRIS P1 TSL 1 (best) BASIC4.84□□□□□ -1.64
Col2a1P28481 AC154573.1-201ENSMUST00000225913 4659 ntBASIC4.84□□□□□ -1.64
Col2a1P28481 Olfr613-201ENSMUST00000106888 5139 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col2a1P28481 Vmn1r171-204ENSMUST00000226733 2918 ntAPPRIS ALT2 BASIC4.83□□□□□ -1.64
Col2a1P28481 C87414-206ENSMUST00000162964 2852 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col2a1P28481 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col2a1P28481 Gm44433-201ENSMUST00000203540 4832 ntBASIC4.83□□□□□ -1.64
Col2a1P28481 Olfr247-202ENSMUST00000215871 1983 ntAPPRIS P5 TSL 5 BASIC4.83□□□□□ -1.64
Col2a1P28481 Gm25420-201ENSMUST00000104216 127 ntBASIC4.83□□□□□ -1.64
Col2a1P28481 Gm23133-201ENSMUST00000104255 135 ntBASIC4.83□□□□□ -1.64
Col2a1P28481 Gm12760-201ENSMUST00000117861 482 ntBASIC4.83□□□□□ -1.64
Col2a1P28481 Gm12486-201ENSMUST00000120887 541 ntBASIC4.83□□□□□ -1.64
Col2a1P28481 Gm23499-201ENSMUST00000157736 268 ntBASIC4.83□□□□□ -1.64
Col2a1P28481 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC4.83□□□□□ -1.64
Col2a1P28481 Gm23816-201ENSMUST00000179617 132 ntBASIC4.83□□□□□ -1.64
Col2a1P28481 Mir7062-201ENSMUST00000185038 66 ntBASIC4.83□□□□□ -1.64
Col2a1P28481 Gm4644-201ENSMUST00000197587 400 ntBASIC4.83□□□□□ -1.64
Col2a1P28481 Pgk1-ps3-201ENSMUST00000198338 1201 ntBASIC4.83□□□□□ -1.64
Col2a1P28481 Gm26691-203ENSMUST00000200444 479 ntTSL 3 BASIC4.83□□□□□ -1.64
Col2a1P28481 AC154374.1-201ENSMUST00000215351 351 ntBASIC4.83□□□□□ -1.64
Col2a1P28481 AC122397.2-201ENSMUST00000227422 686 ntBASIC4.83□□□□□ -1.64
Col2a1P28481 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC4.83□□□□□ -1.64
Col2a1P28481 Gm10916-201ENSMUST00000080330 483 ntBASIC4.83□□□□□ -1.64
Col2a1P28481 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.83□□□□□ -1.64
Col2a1P28481 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col2a1P28481 Pou2f1-208ENSMUST00000160260 13022 ntAPPRIS ALT2 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col2a1P28481 Gm37628-201ENSMUST00000194644 5440 ntBASIC4.83□□□□□ -1.64
Col2a1P28481 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col2a1P28481 Scn9a-207ENSMUST00000169900 7497 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Col2a1P28481 Vmn2r51-201ENSMUST00000094863 2559 ntAPPRIS P1 TSL 5 BASIC4.83□□□□□ -1.64
Col2a1P28481 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC4.83□□□□□ -1.64
Col2a1P28481 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC4.83□□□□□ -1.64
Col2a1P28481 Kcnj1-201ENSMUST00000047334 2987 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col2a1P28481 AC154677.1-201ENSMUST00000227636 2805 ntBASIC4.83□□□□□ -1.64
Col2a1P28481 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col2a1P28481 Nlrp4b-201ENSMUST00000047809 3274 ntAPPRIS P1 TSL 1 (best) BASIC4.83□□□□□ -1.64
Col2a1P28481 Trac-201ENSMUST00000103740 413 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col2a1P28481 Gm24281-201ENSMUST00000104234 136 ntBASIC4.82□□□□□ -1.64
Col2a1P28481 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col2a1P28481 Gm6071-201ENSMUST00000119561 440 ntBASIC4.82□□□□□ -1.64
Col2a1P28481 Mup-ps17-201ENSMUST00000120723 218 ntBASIC4.82□□□□□ -1.64
Col2a1P28481 Gm12885-201ENSMUST00000122246 328 ntBASIC4.82□□□□□ -1.64
Col2a1P28481 Platr3-201ENSMUST00000146980 412 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col2a1P28481 Cst12-202ENSMUST00000168443 546 ntAPPRIS P2 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col2a1P28481 Gm25999-201ENSMUST00000175398 133 ntBASIC4.82□□□□□ -1.64
Col2a1P28481 Gm22120-201ENSMUST00000175590 70 ntBASIC4.82□□□□□ -1.64
Col2a1P28481 Gm26877-201ENSMUST00000180728 633 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col2a1P28481 Gm5066-201ENSMUST00000188479 822 ntBASIC4.82□□□□□ -1.64
Col2a1P28481 Gm37300-201ENSMUST00000193327 280 ntBASIC4.82□□□□□ -1.64
Col2a1P28481 1700023G09Rik-202ENSMUST00000194671 308 ntTSL 3 BASIC4.82□□□□□ -1.64
Col2a1P28481 Clec2f-202ENSMUST00000204981 657 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col2a1P28481 Zfp950-210ENSMUST00000205854 466 ntTSL 3 BASIC4.82□□□□□ -1.64
Col2a1P28481 Gm21320-201ENSMUST00000211875 861 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col2a1P28481 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col2a1P28481 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col2a1P28481 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC4.82□□□□□ -1.64
Col2a1P28481 Gm7381-201ENSMUST00000098958 300 ntBASIC4.82□□□□□ -1.64
Col2a1P28481 AC169985.1-201ENSMUST00000223648 2439 ntBASIC4.82□□□□□ -1.64
Col2a1P28481 Axdnd1-211ENSMUST00000213088 3561 ntAPPRIS P2 TSL 5 BASIC4.82□□□□□ -1.64
Col2a1P28481 2210418O10Rik-203ENSMUST00000136719 2314 ntTSL 1 (best) BASIC4.82□□□□□ -1.64
Col2a1P28481 Olfr1501-202ENSMUST00000208493 4230 ntAPPRIS P1 TSL 2 BASIC4.82□□□□□ -1.64
Col2a1P28481 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.82□□□□□ -1.64
Col2a1P28481 Gm7073-203ENSMUST00000190178 1419 ntAPPRIS P1 TSL 1 (best) BASIC4.82□□□□□ -1.64
Col2a1P28481 Gm36931-201ENSMUST00000192997 4801 ntBASIC4.82□□□□□ -1.64
Col2a1P28481 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC4.82□□□□□ -1.64
Col2a1P28481 Olfr703-202ENSMUST00000216254 1920 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col2a1P28481 2210407C18Rik-202ENSMUST00000108821 998 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Col2a1P28481 Gm14299-201ENSMUST00000117586 397 ntBASIC4.81□□□□□ -1.64
Col2a1P28481 Gm13478-201ENSMUST00000118312 413 ntBASIC4.81□□□□□ -1.64
Col2a1P28481 Gm5133-201ENSMUST00000118940 1255 ntBASIC4.81□□□□□ -1.64
Col2a1P28481 Gm13852-201ENSMUST00000122350 242 ntBASIC4.81□□□□□ -1.64
Col2a1P28481 Gm14902-201ENSMUST00000145576 1007 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
Col2a1P28481 Gm26005-201ENSMUST00000158802 134 ntBASIC4.81□□□□□ -1.64
Col2a1P28481 Gm29484-201ENSMUST00000186067 324 ntBASIC4.81□□□□□ -1.64
Col2a1P28481 Gm38061-201ENSMUST00000192490 365 ntBASIC4.81□□□□□ -1.64
Col2a1P28481 AC159244.1-201ENSMUST00000220964 594 ntBASIC4.81□□□□□ -1.64
Col2a1P28481 AC154742.1-201ENSMUST00000223477 573 ntTSL 5 BASIC4.81□□□□□ -1.64
Col2a1P28481 AC124408.1-201ENSMUST00000228938 707 ntBASIC4.81□□□□□ -1.64
Col2a1P28481 Dppa3-201ENSMUST00000049644 833 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col2a1P28481 Olfr1369-ps1-201ENSMUST00000079050 954 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Col2a1P28481 Gm10042-201ENSMUST00000079884 78 ntBASIC4.81□□□□□ -1.64
Col2a1P28481 Tom1l1-201ENSMUST00000020849 4308 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
Col2a1P28481 Vmn1r51-205ENSMUST00000227109 4214 ntAPPRIS P1 BASIC4.81□□□□□ -1.64
Col2a1P28481 Olfr570-202ENSMUST00000209778 1423 ntAPPRIS P1 TSL 5 BASIC4.81□□□□□ -1.64
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms