Protein–RNA interactions for Protein: P11416

Rara, Retinoic acid receptor alpha, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RaraP11416 Gm45868-201ENSMUST00000210247 473 ntTSL 3 BASIC6.3□□□□□ -1.4
RaraP11416 Gm8523-201ENSMUST00000211386 552 ntBASIC6.3□□□□□ -1.4
RaraP11416 Gm2436-201ENSMUST00000219562 774 ntBASIC6.3□□□□□ -1.4
RaraP11416 AC153548.2-201ENSMUST00000219770 885 ntBASIC6.3□□□□□ -1.4
RaraP11416 AC102291.2-201ENSMUST00000228083 367 ntBASIC6.3□□□□□ -1.4
RaraP11416 Prss23os-201ENSMUST00000032858 334 ntTSL 2 BASIC6.3□□□□□ -1.4
RaraP11416 Olfr250-201ENSMUST00000052085 996 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
RaraP11416 Olfr857-201ENSMUST00000077023 930 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RaraP11416 Olfr951-201ENSMUST00000078531 945 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
RaraP11416 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RaraP11416 Olfr954-201ENSMUST00000080329 945 ntAPPRIS P2 BASIC6.3□□□□□ -1.4
RaraP11416 Prl2b1-201ENSMUST00000091678 891 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RaraP11416 Gm19084-201ENSMUST00000222939 1762 ntBASIC6.3□□□□□ -1.4
RaraP11416 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.3□□□□□ -1.4
RaraP11416 A630031M04Rik-201ENSMUST00000146587 3568 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
RaraP11416 Olfr739-202ENSMUST00000216949 3581 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
RaraP11416 Gm21093-201ENSMUST00000084677 1710 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
RaraP11416 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
RaraP11416 Cntn1-201ENSMUST00000000109 5646 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
RaraP11416 Gm43842-201ENSMUST00000202890 2982 ntBASIC6.3□□□□□ -1.4
RaraP11416 Slc44a1-205ENSMUST00000107651 4382 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
RaraP11416 Slc22a27-202ENSMUST00000182102 1801 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RaraP11416 Gm44678-201ENSMUST00000207828 2775 ntBASIC6.29□□□□□ -1.4
RaraP11416 Fbxw25-201ENSMUST00000163839 1490 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RaraP11416 Ubtfl1-201ENSMUST00000098973 1649 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RaraP11416 Vmn1r196-205ENSMUST00000228557 5790 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
RaraP11416 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RaraP11416 Gm23294-201ENSMUST00000104150 164 ntBASIC6.29□□□□□ -1.4
RaraP11416 Gm13641-201ENSMUST00000117993 473 ntBASIC6.29□□□□□ -1.4
RaraP11416 Gm15231-201ENSMUST00000119174 447 ntBASIC6.29□□□□□ -1.4
RaraP11416 Gm14925-201ENSMUST00000120611 438 ntBASIC6.29□□□□□ -1.4
RaraP11416 Gm13220-201ENSMUST00000121535 508 ntBASIC6.29□□□□□ -1.4
RaraP11416 Gm7931-201ENSMUST00000121537 271 ntBASIC6.29□□□□□ -1.4
RaraP11416 Olfr1021-ps1-201ENSMUST00000121914 1042 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
RaraP11416 Gm13669-201ENSMUST00000122366 457 ntBASIC6.29□□□□□ -1.4
RaraP11416 Gm25826-201ENSMUST00000157090 137 ntBASIC6.29□□□□□ -1.4
RaraP11416 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC6.29□□□□□ -1.4
RaraP11416 Gm4134-201ENSMUST00000173244 563 ntBASIC6.29□□□□□ -1.4
RaraP11416 B130034C11Rik-201ENSMUST00000175717 1401 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RaraP11416 AA465934-205ENSMUST00000177533 308 ntTSL 2 BASIC6.29□□□□□ -1.4
RaraP11416 Gm28209-201ENSMUST00000187956 775 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RaraP11416 Gm37164-201ENSMUST00000192809 637 ntBASIC6.29□□□□□ -1.4
RaraP11416 Gm38185-201ENSMUST00000193195 694 ntBASIC6.29□□□□□ -1.4
RaraP11416 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC6.29□□□□□ -1.4
RaraP11416 5830405F06Rik-202ENSMUST00000193357 844 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RaraP11416 Gm3952-201ENSMUST00000195093 573 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
RaraP11416 Gm44468-201ENSMUST00000199516 105 ntBASIC6.29□□□□□ -1.4
RaraP11416 Gm4501-201ENSMUST00000207330 551 ntBASIC6.29□□□□□ -1.4
RaraP11416 Gm4558-201ENSMUST00000207886 521 ntBASIC6.29□□□□□ -1.4
RaraP11416 Gm4528-201ENSMUST00000207905 551 ntBASIC6.29□□□□□ -1.4
RaraP11416 Gm45044-201ENSMUST00000208078 396 ntTSL 5 BASIC6.29□□□□□ -1.4
RaraP11416 Gm45615-201ENSMUST00000210417 656 ntTSL 3 BASIC6.29□□□□□ -1.4
RaraP11416 Nxpe1-ps-203ENSMUST00000210879 822 ntTSL 5 BASIC6.29□□□□□ -1.4
RaraP11416 4933430A20Rik-201ENSMUST00000210943 1558 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RaraP11416 Ss18l2-204ENSMUST00000215104 315 ntTSL 5 BASIC6.29□□□□□ -1.4
RaraP11416 AC147240.1-201ENSMUST00000218767 431 ntBASIC6.29□□□□□ -1.4
RaraP11416 AC093316.1-201ENSMUST00000218793 529 ntTSL 5 BASIC6.29□□□□□ -1.4
RaraP11416 Gm16368-201ENSMUST00000222340 435 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
RaraP11416 Dcp2-201ENSMUST00000025350 8616 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
RaraP11416 n-R5-8s1-201ENSMUST00000083988 148 ntBASIC6.29□□□□□ -1.4
RaraP11416 Lair1-203ENSMUST00000086401 2496 ntAPPRIS P3 TSL 1 (best) BASIC6.29□□□□□ -1.4
RaraP11416 Atp2c1-202ENSMUST00000085133 4665 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
RaraP11416 Mtus1-205ENSMUST00000118835 6426 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
RaraP11416 Vmn2r-ps38-201ENSMUST00000173752 2573 ntBASIC6.29□□□□□ -1.4
RaraP11416 Rabgap1-203ENSMUST00000112920 4847 ntAPPRIS P4 TSL 5 BASIC6.29□□□□□ -1.4
RaraP11416 Csde1-215ENSMUST00000199420 4185 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm37717-201ENSMUST00000192647 3027 ntBASIC6.28□□□□□ -1.4
RaraP11416 Senp7-203ENSMUST00000089362 4825 ntAPPRIS P2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RaraP11416 Olfr655-203ENSMUST00000215538 2012 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Asah2-201ENSMUST00000096119 4682 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Csrnp3-204ENSMUST00000122912 10672 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RaraP11416 Gm17916-201ENSMUST00000186137 1342 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
RaraP11416 Vmn2r79-201ENSMUST00000164462 2556 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 AC132384.12-201ENSMUST00000219608 4227 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 AC154612.1-202ENSMUST00000224806 1725 ntBASIC6.28□□□□□ -1.4
RaraP11416 Ugt8a-203ENSMUST00000198610 3762 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RaraP11416 Pcdh15-201ENSMUST00000064562 8830 ntTSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Ccdc7a-205ENSMUST00000214889 5544 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm43886-201ENSMUST00000205039 2386 ntBASIC6.28□□□□□ -1.4
RaraP11416 F13b-201ENSMUST00000027615 2379 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RaraP11416 Htr2a-201ENSMUST00000036653 5606 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
RaraP11416 Klhl4-202ENSMUST00000113371 3566 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
RaraP11416 Klhl4-201ENSMUST00000040504 3584 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
RaraP11416 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm11290-204ENSMUST00000224688 3042 ntBASIC6.28□□□□□ -1.4
RaraP11416 Gm24272-201ENSMUST00000102329 98 ntBASIC6.28□□□□□ -1.4
RaraP11416 Gm25795-201ENSMUST00000104421 132 ntBASIC6.28□□□□□ -1.4
RaraP11416 Gm13023-202ENSMUST00000105770 833 ntAPPRIS ALT2 TSL 2 BASIC6.28□□□□□ -1.4
RaraP11416 Gm12653-201ENSMUST00000117778 561 ntBASIC6.28□□□□□ -1.4
RaraP11416 Gm14909-201ENSMUST00000117853 351 ntBASIC6.28□□□□□ -1.4
RaraP11416 Gm12803-201ENSMUST00000118907 821 ntBASIC6.28□□□□□ -1.4
RaraP11416 Gm14267-201ENSMUST00000119751 496 ntBASIC6.28□□□□□ -1.4
RaraP11416 Gm14679-201ENSMUST00000121536 722 ntBASIC6.28□□□□□ -1.4
RaraP11416 Vmn1r-ps94-201ENSMUST00000122016 458 ntBASIC6.28□□□□□ -1.4
RaraP11416 Gm16347-201ENSMUST00000131707 622 ntTSL 2 BASIC6.28□□□□□ -1.4
RaraP11416 Gm24550-201ENSMUST00000158648 279 ntBASIC6.28□□□□□ -1.4
RaraP11416 Obox1-203ENSMUST00000172881 821 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
RaraP11416 Gm7952-201ENSMUST00000180540 984 ntBASIC6.28□□□□□ -1.4
RaraP11416 Gm27602-201ENSMUST00000183861 111 ntBASIC6.28□□□□□ -1.4
RaraP11416 Gm27348-201ENSMUST00000184511 170 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 77.5 ms