Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 AC159622.1-201ENSMUST00000221004 554 ntBASIC5□□□□□ -1.61
Col1a1P11087 Ly6a-201ENSMUST00000023248 819 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
Col1a1P11087 Olfr507-201ENSMUST00000080014 951 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col1a1P11087 Gm7808-201ENSMUST00000082002 387 ntBASIC5□□□□□ -1.61
Col1a1P11087 Olfr1039-201ENSMUST00000099910 960 ntAPPRIS P1 BASIC5□□□□□ -1.61
Col1a1P11087 Slco1b2-201ENSMUST00000042812 3307 ntAPPRIS P2 TSL 1 (best) BASIC5□□□□□ -1.61
Col1a1P11087 Cd28-201ENSMUST00000027165 4347 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col1a1P11087 Gm6558-201ENSMUST00000191934 1973 ntBASIC4.99□□□□□ -1.61
Col1a1P11087 4932411N23Rik-201ENSMUST00000081074 3407 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col1a1P11087 Olfr1341-203ENSMUST00000215117 4700 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col1a1P11087 5330434G04Rik-202ENSMUST00000136406 3545 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col1a1P11087 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col1a1P11087 2810474O19Rik-208ENSMUST00000189837 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col1a1P11087 Olfr348-203ENSMUST00000214909 3634 ntAPPRIS P1 TSL 5 BASIC4.99□□□□□ -1.61
Col1a1P11087 Gm5248-201ENSMUST00000186108 4046 ntBASIC4.99□□□□□ -1.61
Col1a1P11087 Gm14308-203ENSMUST00000119149 1458 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col1a1P11087 Gm14434-202ENSMUST00000120959 1458 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col1a1P11087 Gm16246-201ENSMUST00000145464 1346 ntTSL 1 (best) BASIC4.99□□□□□ -1.61
Col1a1P11087 Sema3a-201ENSMUST00000030714 5930 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col1a1P11087 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col1a1P11087 Gm38259-201ENSMUST00000194602 3534 ntBASIC4.99□□□□□ -1.61
Col1a1P11087 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.99□□□□□ -1.61
Col1a1P11087 Gm6902-202ENSMUST00000191169 1581 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col1a1P11087 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col1a1P11087 Gm42717-201ENSMUST00000197309 3463 ntBASIC4.99□□□□□ -1.61
Col1a1P11087 Btbd35f7-201ENSMUST00000105007 1960 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col1a1P11087 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.99□□□□□ -1.61
Col1a1P11087 Gm11692-201ENSMUST00000122121 902 ntBASIC4.99□□□□□ -1.61
Col1a1P11087 2810403D21Rik-206ENSMUST00000151166 1107 ntTSL 3 BASIC4.99□□□□□ -1.61
Col1a1P11087 Gm25447-201ENSMUST00000158997 128 ntBASIC4.99□□□□□ -1.61
Col1a1P11087 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col1a1P11087 Gm7299-201ENSMUST00000194441 581 ntBASIC4.99□□□□□ -1.61
Col1a1P11087 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.99□□□□□ -1.61
Col1a1P11087 Gm44278-201ENSMUST00000204082 312 ntTSL 2 BASIC4.99□□□□□ -1.61
Col1a1P11087 Gm7786-201ENSMUST00000210494 436 ntBASIC4.99□□□□□ -1.61
Col1a1P11087 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.99□□□□□ -1.61
Col1a1P11087 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.99□□□□□ -1.61
Col1a1P11087 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.99□□□□□ -1.61
Col1a1P11087 Gm16185-201ENSMUST00000125071 3207 ntTSL 5 BASIC4.99□□□□□ -1.61
Col1a1P11087 Vmn1r34-206ENSMUST00000228498 3078 ntAPPRIS P1 BASIC4.99□□□□□ -1.61
Col1a1P11087 AC155922.2-201ENSMUST00000220240 1458 ntTSL 5 BASIC4.98□□□□□ -1.61
Col1a1P11087 Vmn1r213-202ENSMUST00000227573 3515 ntAPPRIS ALT2 BASIC4.98□□□□□ -1.61
Col1a1P11087 Cntn6-205ENSMUST00000162872 3467 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col1a1P11087 D130004A15Rik-201ENSMUST00000201492 1577 ntBASIC4.98□□□□□ -1.61
Col1a1P11087 Epha7-203ENSMUST00000108191 6615 ntAPPRIS ALT1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col1a1P11087 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.98□□□□□ -1.61
Col1a1P11087 Zscan4-ps1-201ENSMUST00000165848 2015 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col1a1P11087 Fat4-201ENSMUST00000061260 16109 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col1a1P11087 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col1a1P11087 Gm15057-201ENSMUST00000121516 534 ntBASIC4.98□□□□□ -1.61
Col1a1P11087 Gm8953-201ENSMUST00000198497 904 ntTSL 5 BASIC4.98□□□□□ -1.61
Col1a1P11087 Gm43635-201ENSMUST00000202533 352 ntTSL 3 BASIC4.98□□□□□ -1.61
Col1a1P11087 Gm6929-201ENSMUST00000210930 468 ntBASIC4.98□□□□□ -1.61
Col1a1P11087 Olfr44-203ENSMUST00000216316 1078 ntAPPRIS ALT2 TSL 3 BASIC4.98□□□□□ -1.61
Col1a1P11087 Gm10037-202ENSMUST00000221266 549 ntAPPRIS P5 TSL 2 BASIC4.98□□□□□ -1.61
Col1a1P11087 AC140209.1-201ENSMUST00000227875 284 ntBASIC4.98□□□□□ -1.61
Col1a1P11087 Vmn1r31-205ENSMUST00000228586 2115 ntAPPRIS P2 BASIC4.98□□□□□ -1.61
Col1a1P11087 Olfr44-201ENSMUST00000077757 1071 ntAPPRIS P2 TSL 3 BASIC4.98□□□□□ -1.61
Col1a1P11087 Snora7a-201ENSMUST00000082629 140 ntBASIC4.98□□□□□ -1.61
Col1a1P11087 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col1a1P11087 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col1a1P11087 Gm38235-201ENSMUST00000194600 4952 ntBASIC4.98□□□□□ -1.61
Col1a1P11087 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC4.98□□□□□ -1.61
Col1a1P11087 Olfm3-201ENSMUST00000051309 3928 ntAPPRIS P4 TSL 1 (best) BASIC4.98□□□□□ -1.61
Col1a1P11087 Olfr1118-202ENSMUST00000216396 4976 ntAPPRIS ALT2 TSL 5 BASIC4.98□□□□□ -1.61
Col1a1P11087 Gm44724-201ENSMUST00000207119 5548 ntTSL 5 BASIC4.97□□□□□ -1.61
Col1a1P11087 Gm37211-201ENSMUST00000193392 3433 ntBASIC4.97□□□□□ -1.61
Col1a1P11087 Lrrc39-201ENSMUST00000029573 3087 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col1a1P11087 Cdh12-201ENSMUST00000075132 5636 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col1a1P11087 Serpinb6c-202ENSMUST00000172184 1327 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col1a1P11087 Gm32647-201ENSMUST00000206116 3288 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col1a1P11087 Ifi208-202ENSMUST00000169857 1767 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col1a1P11087 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col1a1P11087 Cul4b-203ENSMUST00000115118 3344 ntAPPRIS P2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Col1a1P11087 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col1a1P11087 AC154462.1-201ENSMUST00000228897 2260 ntBASIC4.97□□□□□ -1.61
Col1a1P11087 Gm8660-201ENSMUST00000105187 918 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col1a1P11087 Vmn1r120-201ENSMUST00000105202 918 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col1a1P11087 Gm5728-201ENSMUST00000105209 918 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col1a1P11087 Gm11212-201ENSMUST00000118337 618 ntBASIC4.97□□□□□ -1.61
Col1a1P11087 Gm6027-201ENSMUST00000121467 756 ntBASIC4.97□□□□□ -1.61
Col1a1P11087 1700073E17Rik-202ENSMUST00000146858 382 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
Col1a1P11087 Gm16545-201ENSMUST00000161968 463 ntBASIC4.97□□□□□ -1.61
Col1a1P11087 Gm17416-201ENSMUST00000163724 201 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
Col1a1P11087 Mir6408-201ENSMUST00000183643 91 ntBASIC4.97□□□□□ -1.61
Col1a1P11087 Gm43856-201ENSMUST00000197004 369 ntBASIC4.97□□□□□ -1.61
Col1a1P11087 Ociad2-206ENSMUST00000202012 876 ntTSL 5 BASIC4.97□□□□□ -1.61
Col1a1P11087 4930598N05Rik-201ENSMUST00000207048 550 ntTSL 5 BASIC4.97□□□□□ -1.61
Col1a1P11087 Fth-ps3-201ENSMUST00000210405 358 ntBASIC4.97□□□□□ -1.61
Col1a1P11087 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.97□□□□□ -1.61
Col1a1P11087 CT571268.1-201ENSMUST00000222320 407 ntBASIC4.97□□□□□ -1.61
Col1a1P11087 Prl3d2-201ENSMUST00000080755 853 ntAPPRIS P2 TSL 5 BASIC4.97□□□□□ -1.61
Col1a1P11087 Mir34b-201ENSMUST00000083558 84 ntBASIC4.97□□□□□ -1.61
Col1a1P11087 Elavl4-205ENSMUST00000106600 3799 ntTSL 5 BASIC4.97□□□□□ -1.61
Col1a1P11087 Nlrp4f-201ENSMUST00000037372 3527 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
Col1a1P11087 Gm43260-201ENSMUST00000197378 2430 ntBASIC4.97□□□□□ -1.61
Col1a1P11087 9630010A21Rik-201ENSMUST00000192348 2703 ntBASIC4.97□□□□□ -1.61
Col1a1P11087 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC4.97□□□□□ -1.61
Col1a1P11087 Zbtb20-204ENSMUST00000114694 26901 ntAPPRIS P3 TSL 5 BASIC4.97□□□□□ -1.61
Col1a1P11087 Aak1-202ENSMUST00000089519 19341 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 79.4 ms