Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 Mfap3-203ENSMUST00000108849 4827 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 AC121870.1-201ENSMUST00000216279 4879 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm24888-201ENSMUST00000104387 130 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Krtap9-5-201ENSMUST00000105052 1077 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Izumo3-201ENSMUST00000107108 1252 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm11504-201ENSMUST00000120211 173 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm15075-201ENSMUST00000122187 477 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm3810-201ENSMUST00000122413 476 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm24836-201ENSMUST00000122609 108 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Vmn2r-ps54-202ENSMUST00000150147 2952 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 1700021L23Rik-201ENSMUST00000153719 726 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm24059-201ENSMUST00000157493 312 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm23030-201ENSMUST00000158004 273 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm23071-201ENSMUST00000158242 115 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm23762-201ENSMUST00000158348 106 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Calml4-202ENSMUST00000163820 699 ntTSL 2 BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Igkv4-53-201ENSMUST00000166380 292 ntAPPRIS P1 BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Mir5617-201ENSMUST00000176786 57 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm29231-201ENSMUST00000179850 319 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm25412-201ENSMUST00000180258 107 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm27190-201ENSMUST00000184890 542 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Ighv1-30-201ENSMUST00000194082 349 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm43115-201ENSMUST00000196244 160 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm42707-202ENSMUST00000196668 618 ntTSL 3 BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm32754-201ENSMUST00000199442 257 ntTSL 5 BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm20559-202ENSMUST00000201831 2993 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm43459-201ENSMUST00000202093 331 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 E230032D23Rik-201ENSMUST00000207189 848 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm44870-201ENSMUST00000207291 357 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 4930402F11Rik-203ENSMUST00000208289 606 ntTSL 3 BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Rps12-ps4-201ENSMUST00000208689 397 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm17737-201ENSMUST00000210183 1147 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 AC112956.1-201ENSMUST00000213563 492 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm35262-201ENSMUST00000215133 267 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 AC159896.3-201ENSMUST00000215904 3835 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 AC165349.1-201ENSMUST00000217896 424 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm35188-201ENSMUST00000218869 535 ntTSL 3 BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm8785-201ENSMUST00000220259 487 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 AC140285.1-201ENSMUST00000220472 452 ntTSL 3 BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 AC160931.2-201ENSMUST00000221445 351 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm33312-201ENSMUST00000222443 332 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 AC160958.1-201ENSMUST00000224833 368 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 CT025157.1-201ENSMUST00000226241 292 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 AC154657.1-201ENSMUST00000226394 775 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 AC116591.1-201ENSMUST00000227919 351 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm21731-201ENSMUST00000079524 489 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 n-R5s41-201ENSMUST00000083025 119 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm43282-201ENSMUST00000201848 2157 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Cpa2-201ENSMUST00000096066 1388 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm42544-201ENSMUST00000197868 3242 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm15232-201ENSMUST00000146929 2318 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm45179-201ENSMUST00000208452 4337 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Olfr527-203ENSMUST00000214858 3362 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Idh3a-201ENSMUST00000167866 2403 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Vmn2r111-201ENSMUST00000092491 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Il1rapl1-203ENSMUST00000113966 9133 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Olfr1281-202ENSMUST00000208176 4905 ntAPPRIS P1 TSL 2 BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Kcnma1-202ENSMUST00000074983 3974 ntAPPRIS ALT2 TSL 5 BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gm8401-201ENSMUST00000120248 1739 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Mcoln3-201ENSMUST00000039450 2991 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 March1-208ENSMUST00000110259 3181 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Gabrp-201ENSMUST00000020366 3280 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm26742-201ENSMUST00000181829 3340 ntTSL 5 BASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Il18rap-201ENSMUST00000027237 4889 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim39Q9ESN2 AC154354.1-201ENSMUST00000224585 2109 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Iqch-201ENSMUST00000042322 3672 ntAPPRIS ALT2 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Iqub-201ENSMUST00000052277 3651 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Naip6-202ENSMUST00000118574 6827 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim39Q9ESN2 4921515E04Rik-203ENSMUST00000227364 2309 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm37943-201ENSMUST00000194053 3944 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Vmn2r25-201ENSMUST00000162046 2568 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Inpp5f-208ENSMUST00000151237 2609 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim39Q9ESN2 BB365896-201ENSMUST00000173978 3000 ntTSL 1 (best) BASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Mecom-212ENSMUST00000173495 5066 ntAPPRIS P5 TSL 5 BASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Eppin-201ENSMUST00000103100 778 ntAPPRIS P1 TSL 1 (best) BASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm14733-201ENSMUST00000117680 133 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm14529-201ENSMUST00000117894 406 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Hmgb1-rs18-201ENSMUST00000117940 627 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm11346-201ENSMUST00000118346 704 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm11219-201ENSMUST00000118565 358 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm13082-201ENSMUST00000118877 561 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm13228-201ENSMUST00000118937 634 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm12053-201ENSMUST00000119022 252 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm11829-201ENSMUST00000121003 282 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm14972-201ENSMUST00000121780 364 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Eif4e1b-203ENSMUST00000126785 841 ntAPPRIS ALT2 TSL 3 BASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Defb44-ps-201ENSMUST00000126871 219 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm9428-201ENSMUST00000127214 769 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm15718-201ENSMUST00000131085 311 ntTSL 3 BASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm7613-201ENSMUST00000139070 487 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm15243-201ENSMUST00000151101 382 ntTSL 2 BASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm23124-201ENSMUST00000157650 107 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm6486-201ENSMUST00000166202 434 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm9556-201ENSMUST00000182938 940 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm10136-201ENSMUST00000183196 435 ntBASIC5.87□□□□□ -1.47
Trim39Q9ESN2 Gm27295-201ENSMUST00000184264 153 ntBASIC5.87□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 61.9 ms