Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 1700061J23Rik-201ENSMUST00000141678 537 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm24289-201ENSMUST00000157629 135 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Mir1970-201ENSMUST00000157839 104 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Vmn1r185-201ENSMUST00000171039 1144 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Lgals1-ps1-201ENSMUST00000173500 368 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm18522-201ENSMUST00000173947 650 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Obox3-ps5-201ENSMUST00000176412 1003 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Vmn1r-ps8-201ENSMUST00000177200 838 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Vmn1r-ps144-201ENSMUST00000177291 939 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm22420-201ENSMUST00000178795 126 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Il19-203ENSMUST00000187410 1135 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm37000-201ENSMUST00000193058 428 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Ighv1-41-201ENSMUST00000194414 329 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm6543-201ENSMUST00000197353 808 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm18867-201ENSMUST00000198022 1179 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Ighv1-79-201ENSMUST00000200152 350 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gstm2-ps1-201ENSMUST00000201478 657 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 4930470O06Rik-201ENSMUST00000209438 662 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm35262-201ENSMUST00000215133 267 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 AC069561.3-201ENSMUST00000217321 114 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 AC155808.1-201ENSMUST00000219288 409 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 AC159297.2-201ENSMUST00000219567 1075 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm29687-201ENSMUST00000223022 879 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 3830406C13Rik-217ENSMUST00000225773 417 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Tas2r129-201ENSMUST00000070991 965 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Ube2d4-201ENSMUST00000075109 406 ntTSL 5 BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Olfr968-201ENSMUST00000075928 1027 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Olfr805-201ENSMUST00000078876 960 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm24928-201ENSMUST00000083399 107 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Gm25897-201ENSMUST00000083709 107 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Mir463-201ENSMUST00000093570 75 ntBASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Nlrp1b-203ENSMUST00000108515 4131 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Ddx56Q9D0R4 Olfr1226-203ENSMUST00000215562 2669 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.52
Ddx56Q9D0R4 Spef2-204ENSMUST00000160236 5313 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Ddx56Q9D0R4 Olfr895-202ENSMUST00000212156 1558 ntAPPRIS P1 TSL 3 BASIC5.59□□□□□ -1.52
Ddx56Q9D0R4 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.52
Ddx56Q9D0R4 Tmem207-201ENSMUST00000165687 1538 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Olfr1443-203ENSMUST00000215134 3995 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Ogt-202ENSMUST00000119299 3840 ntAPPRIS ALT1 TSL 5 BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 AC159308.1-201ENSMUST00000216615 1351 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm43662-201ENSMUST00000198310 2271 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Mmp12-201ENSMUST00000005950 3607 ntAPPRIS P3 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Spef2-206ENSMUST00000208854 7038 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 3110043O21Rik-202ENSMUST00000108126 2644 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm43200-201ENSMUST00000200385 2161 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Cdh17-201ENSMUST00000029871 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm13090-201ENSMUST00000105667 746 ntAPPRIS P1 TSL 3 BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Rps15a-ps8-201ENSMUST00000117914 387 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm14220-201ENSMUST00000118114 449 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm13367-201ENSMUST00000119955 796 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm14655-201ENSMUST00000120124 578 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm11825-201ENSMUST00000120710 736 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm11909-201ENSMUST00000121424 759 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm12735-201ENSMUST00000146218 651 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm11636-201ENSMUST00000152172 774 ntTSL 2 BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Igfl3-201ENSMUST00000152973 575 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 5330429C05Rik-201ENSMUST00000154615 487 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm23501-201ENSMUST00000157744 256 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Scarna13-201ENSMUST00000158164 275 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm24940-201ENSMUST00000158326 108 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 AY512915-204ENSMUST00000162315 676 ntTSL 3 BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm16318-201ENSMUST00000162402 601 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm17377-201ENSMUST00000165184 207 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm17085-201ENSMUST00000165425 502 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm6650-201ENSMUST00000166710 614 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm20526-201ENSMUST00000173416 158 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Obox4-ps23-201ENSMUST00000175738 1137 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Obox4-ps22-201ENSMUST00000179602 1137 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Obox4-ps13-201ENSMUST00000180123 1137 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm28214-201ENSMUST00000185663 420 ntTSL 5 BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm28526-201ENSMUST00000187731 419 ntTSL 2 BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm29148-201ENSMUST00000188140 336 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm18644-201ENSMUST00000211458 815 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Camta1-213ENSMUST00000214673 243 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm36173-201ENSMUST00000219101 1163 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm46401-201ENSMUST00000221291 1089 ntTSL 5 BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 4930442G10Rik-202ENSMUST00000221968 1096 ntTSL 5 BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 AC238676.3-201ENSMUST00000223042 154 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Sult3a2-202ENSMUST00000223295 930 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 AC168881.1-201ENSMUST00000226018 430 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 AC132918.1-201ENSMUST00000227877 925 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Olfr745-201ENSMUST00000062534 1175 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Olfr1170-201ENSMUST00000099831 951 ntAPPRIS P1 BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Olfr690-203ENSMUST00000216230 2085 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Fam26d-201ENSMUST00000048052 3711 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Dcun1d1-203ENSMUST00000178098 4434 ntTSL 5 BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 A230085B16Rik-201ENSMUST00000209781 1856 ntBASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 AC168274.1-201ENSMUST00000218657 1864 ntTSL 5 BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Rev3l-207ENSMUST00000164763 10399 ntAPPRIS P1 TSL 5 BASIC5.58□□□□□ -1.52
Ddx56Q9D0R4 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
Retrieved 100 of 76,532 protein–RNA pairs in 89.2 ms