Protein–RNA interactions for Protein: Q9CQS8

Sec61b, Protein transport protein Sec61 subunit beta, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sec61bQ9CQS8 Gm38032-201ENSMUST00000195052 1589 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Slmap-202ENSMUST00000090359 4076 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Slc17a2-201ENSMUST00000006786 4629 ntAPPRIS P2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm21833-201ENSMUST00000177665 1500 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Vip-201ENSMUST00000019906 1530 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Olfr972-203ENSMUST00000216167 1522 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Vmn1r169-205ENSMUST00000228832 2749 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Mbnl2-202ENSMUST00000167459 4534 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Vmn1r181-208ENSMUST00000228842 4491 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Crtam-202ENSMUST00000180384 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gdap10-201ENSMUST00000180613 5003 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Crtam-204ENSMUST00000188848 5001 ntAPPRIS P3 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Atf7-211ENSMUST00000184906 1457 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm9874-202ENSMUST00000194957 1464 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm1966-201ENSMUST00000184540 7293 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Cdh2-202ENSMUST00000115850 3785 ntTSL 5 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Psd3-201ENSMUST00000038959 11319 ntAPPRIS ALT2 TSL 5 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Vmn2r28-201ENSMUST00000086297 3785 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Psd3-205ENSMUST00000098696 11316 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm45853-201ENSMUST00000212310 3171 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Vmn2r-ps40-201ENSMUST00000174438 2558 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Olfr1339-202ENSMUST00000217522 2559 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Vmn1r89-204ENSMUST00000227239 1992 ntAPPRIS P2 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Oxr1-201ENSMUST00000022918 4232 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Fbxl13-201ENSMUST00000051358 2531 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Zfp110-205ENSMUST00000168247 2499 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm5512-201ENSMUST00000218013 1353 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm36229-201ENSMUST00000218737 1855 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 A730017C20Rik-201ENSMUST00000058633 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Creb1-201ENSMUST00000049932 5009 ntTSL 5 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 AC138765.2-202ENSMUST00000228418 3435 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm39566-201ENSMUST00000210714 3908 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm3669-201ENSMUST00000126712 1846 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm2165-202ENSMUST00000129963 1846 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm2101-203ENSMUST00000133794 1846 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm2117-203ENSMUST00000147993 1846 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Slc30a7-201ENSMUST00000067485 9020 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm22774-201ENSMUST00000102084 109 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm26416-201ENSMUST00000104280 134 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm24889-201ENSMUST00000104388 132 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm25724-201ENSMUST00000104531 117 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Glrb-202ENSMUST00000107743 1101 ntTSL 5 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Sub1-202ENSMUST00000110504 675 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm15752-201ENSMUST00000117427 394 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm14627-201ENSMUST00000118931 567 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm12710-201ENSMUST00000119011 216 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm14559-201ENSMUST00000121745 496 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm15671-201ENSMUST00000124160 576 ntTSL 5 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm16126-201ENSMUST00000126025 589 ntTSL 3 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm13175-201ENSMUST00000139479 466 ntTSL 3 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm12505-201ENSMUST00000146041 757 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm12414-201ENSMUST00000150794 494 ntTSL 5 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm22596-201ENSMUST00000157601 316 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 2310075C17Rik-201ENSMUST00000161216 326 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm24756-201ENSMUST00000177002 96 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm21746-201ENSMUST00000177612 543 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 n-R5s93-201ENSMUST00000180091 119 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Snhg5-202ENSMUST00000182232 781 ntTSL 2 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm28506-201ENSMUST00000189937 150 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Platr10-201ENSMUST00000190602 1026 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Ighv8-3-201ENSMUST00000194985 295 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm6260-202ENSMUST00000197170 921 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm18430-201ENSMUST00000197534 682 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm43083-201ENSMUST00000199594 476 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm3511-201ENSMUST00000199823 204 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm43645-201ENSMUST00000200129 341 ntTSL 2 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm43151-201ENSMUST00000201093 657 ntTSL 3 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Klrb1-ps1-202ENSMUST00000203057 414 ntTSL 5 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm38832-201ENSMUST00000205674 400 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm2221-201ENSMUST00000209342 418 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm45798-201ENSMUST00000212370 511 ntTSL 5 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm9535-201ENSMUST00000218499 768 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 AC132587.1-201ENSMUST00000220562 166 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 AC159208.1-201ENSMUST00000221403 649 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 AC127242.3-201ENSMUST00000222009 580 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm20102-201ENSMUST00000222445 220 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm36758-201ENSMUST00000222594 310 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 AC165157.1-201ENSMUST00000222981 580 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gnrh1-203ENSMUST00000223951 411 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 AC129085.4-201ENSMUST00000224536 570 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Sprr2k-201ENSMUST00000067102 637 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Olfr943-201ENSMUST00000071617 1079 ntAPPRIS P2 TSL 3 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Magea3-201ENSMUST00000079867 963 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Trmt2b-201ENSMUST00000087540 822 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm8297-202ENSMUST00000171964 1759 ntAPPRIS P5 TSL 5 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Pcbp2-203ENSMUST00000108838 2775 ntAPPRIS ALT1 TSL 2 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Fbxw10-203ENSMUST00000150989 3267 ntAPPRIS P3 TSL 5 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Trpa1-201ENSMUST00000041447 4263 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 CT009765.1-201ENSMUST00000219088 2705 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 AC155941.4-201ENSMUST00000219731 2705 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 AC210924.1-201ENSMUST00000221183 2705 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 AC121504.1-201ENSMUST00000221385 2705 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 AC154903.1-201ENSMUST00000222121 2705 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 AC153132.1-201ENSMUST00000222625 2705 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm14857-201ENSMUST00000117862 3185 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Polr2b-201ENSMUST00000031167 4145 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm3675-201ENSMUST00000175904 1653 ntBASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Olfr385-202ENSMUST00000215689 1671 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Sec61bQ9CQS8 Gm10723-201ENSMUST00000195366 6918 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 67.1 ms