Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Zfp773-202ENSMUST00000211240 4073 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Wdr66-206ENSMUST00000163092 4009 ntTSL 5 BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Actrt1-201ENSMUST00000059466 1339 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Pomp-202ENSMUST00000201120 3850 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Igkv12-38-201ENSMUST00000103371 344 ntAPPRIS ALT2 BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Cav1-203ENSMUST00000115454 613 ntTSL 2 BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm15177-201ENSMUST00000120491 577 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm11894-201ENSMUST00000121579 328 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 1700026D11Rik-203ENSMUST00000144501 535 ntTSL 3 BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Ap3m1-ps-201ENSMUST00000177652 1258 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm23945-201ENSMUST00000179609 92 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm26092-201ENSMUST00000179798 97 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Mir669a-1-201ENSMUST00000180238 97 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm26652-201ENSMUST00000180592 373 ntTSL 3 BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm26988-201ENSMUST00000183296 945 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm27332-201ENSMUST00000184893 112 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm5116-201ENSMUST00000187732 463 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm29627-201ENSMUST00000187984 463 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm37577-203ENSMUST00000194712 991 ntTSL 5 BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm37404-201ENSMUST00000195726 359 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm43238-201ENSMUST00000196463 359 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm38670-201ENSMUST00000199248 77 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm43554-201ENSMUST00000199987 186 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm32158-201ENSMUST00000200135 404 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm44219-201ENSMUST00000203005 273 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Spcs2-202ENSMUST00000207063 727 ntTSL 2 BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm2676-201ENSMUST00000207279 606 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm44516-201ENSMUST00000208794 833 ntTSL 5 BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm45777-201ENSMUST00000213009 301 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm36367-201ENSMUST00000217623 1158 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clp1Q99LI9 RMST_1.1-206ENSMUST00000218255 309 ntTSL 3 BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC6.36□□□□□ -1.39
Clp1Q99LI9 AC154755.1-201ENSMUST00000225244 537 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 AC154738.4-201ENSMUST00000228310 414 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clp1Q99LI9 mt-Nd6-201ENSMUST00000082419 519 ntAPPRIS P1 BASIC6.36□□□□□ -1.39
Clp1Q99LI9 n-R5s173-201ENSMUST00000082620 119 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm23447-201ENSMUST00000082798 163 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Mir188-201ENSMUST00000083464 68 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 n-R5s46-201ENSMUST00000083960 116 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm26886-204ENSMUST00000181772 2085 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Poln-206ENSMUST00000202638 2814 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Cyp2j6-201ENSMUST00000030303 3605 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm44530-201ENSMUST00000207920 3559 ntBASIC6.36□□□□□ -1.39
Clp1Q99LI9 Olfr539-202ENSMUST00000218865 11486 ntAPPRIS ALT2 TSL 5 BASIC6.36□□□□□ -1.39
Clp1Q99LI9 4921529L05Rik-201ENSMUST00000203047 1997 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clp1Q99LI9 C230099D08Rik-201ENSMUST00000215772 2727 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Gm11397-201ENSMUST00000050276 1862 ntAPPRIS P1 TSL 5 BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Zranb3-203ENSMUST00000112538 4741 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Cts8-201ENSMUST00000021891 2505 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Ccdc144b-203ENSMUST00000200469 2481 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Mgam-206ENSMUST00000202779 3821 ntTSL 1 (best) BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Itih2-201ENSMUST00000042290 3100 ntAPPRIS P1 TSL 1 (best) BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Mef2c-214ENSMUST00000197722 3517 ntTSL 5 BASIC6.36□□□□□ -1.39
Clp1Q99LI9 Ino80d-201ENSMUST00000097718 13675 ntTSL 5 BASIC6.35□□□□□ -1.39
Clp1Q99LI9 Olfr1298-202ENSMUST00000208284 1563 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Clp1Q99LI9 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Clp1Q99LI9 Cyld-206ENSMUST00000209559 4476 ntAPPRIS P3 TSL 1 (best) BASIC6.35□□□□□ -1.39
Clp1Q99LI9 Olfr9-201ENSMUST00000091996 2672 ntAPPRIS P1 BASIC6.35□□□□□ -1.39
Clp1Q99LI9 Fam196b-202ENSMUST00000165963 5371 ntAPPRIS P1 TSL 5 BASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm26659-201ENSMUST00000181816 3655 ntTSL 5 BASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm42436-201ENSMUST00000198804 3656 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 Usp26-202ENSMUST00000114869 4133 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm30075-201ENSMUST00000205509 3005 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Clp1Q99LI9 AC155167.2-201ENSMUST00000226127 1945 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 Usp26-201ENSMUST00000069509 4120 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm43745-201ENSMUST00000198085 1883 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm19368-201ENSMUST00000221258 4424 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm42607-201ENSMUST00000200221 3393 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 Mllt10-202ENSMUST00000114669 3865 ntTSL 5 BASIC6.35□□□□□ -1.39
Clp1Q99LI9 Plek-201ENSMUST00000020321 3896 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Clp1Q99LI9 Arhgdib-202ENSMUST00000111891 828 ntAPPRIS P1 TSL 2 BASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm22710-201ENSMUST00000116892 125 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm16205-201ENSMUST00000117720 1027 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm11972-201ENSMUST00000118514 389 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm15480-201ENSMUST00000120442 519 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm13220-201ENSMUST00000121535 508 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 1700061H18Rik-201ENSMUST00000139488 634 ntTSL 1 (best) BASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm9498-201ENSMUST00000140849 291 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm25150-201ENSMUST00000157121 60 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm23553-201ENSMUST00000157817 295 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm15657-203ENSMUST00000163077 779 ntTSL 3 BASIC6.35□□□□□ -1.39
Clp1Q99LI9 Vmn2r-ps19-201ENSMUST00000179720 269 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm22917-201ENSMUST00000180116 110 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 Ly6a-204ENSMUST00000187994 955 ntAPPRIS P1 TSL 1 (best) BASIC6.35□□□□□ -1.39
Clp1Q99LI9 Csn2-208ENSMUST00000198057 827 ntAPPRIS ALT2 TSL 5 BASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm7181-201ENSMUST00000202197 434 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm44442-201ENSMUST00000204298 422 ntTSL 3 BASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm45427-201ENSMUST00000209572 1253 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 Gm3690-201ENSMUST00000211341 262 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 AC151971.3-201ENSMUST00000214694 404 ntBASIC6.35□□□□□ -1.39
Clp1Q99LI9 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC6.35□□□□□ -1.39
Clp1Q99LI9 AC166369.1-201ENSMUST00000228126 351 ntBASIC6.35□□□□□ -1.39
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms