Protein–RNA interactions for Protein: Q91XZ7

Pcdhb3, Protocadherin beta 3, mousemouse

Predictions only

Length 784 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb3Q91XZ7 Atf2-204ENSMUST00000112007 4195 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdhb3Q91XZ7 Dnah17-203ENSMUST00000106308 14973 ntAPPRIS ALT2 TSL 5 BASIC6.66□□□□□ -1.34
Pcdhb3Q91XZ7 Olfr43-204ENSMUST00000215550 1854 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Pcdhb3Q91XZ7 5430427O19Rik-201ENSMUST00000113976 3754 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdhb3Q91XZ7 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdhb3Q91XZ7 Smc2-202ENSMUST00000117280 5328 ntAPPRIS P1 TSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdhb3Q91XZ7 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC6.66□□□□□ -1.34
Pcdhb3Q91XZ7 Olfr348-202ENSMUST00000213498 3540 ntAPPRIS P1 TSL 3 BASIC6.66□□□□□ -1.34
Pcdhb3Q91XZ7 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC6.66□□□□□ -1.34
Pcdhb3Q91XZ7 Ralgapa2-205ENSMUST00000131824 5624 ntAPPRIS ALT2 TSL 5 BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Zfp473-203ENSMUST00000120074 3624 ntAPPRIS P3 TSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 AC158232.1-201ENSMUST00000217882 2071 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Sucnr1-201ENSMUST00000029326 1571 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Sult2a8-201ENSMUST00000063509 2143 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm19619-201ENSMUST00000200707 3201 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm29091-201ENSMUST00000187289 2159 ntTSL 5 BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Sptlc3-201ENSMUST00000047370 2759 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Golga1-202ENSMUST00000112850 4635 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Cenpe-201ENSMUST00000062893 7910 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm37945-201ENSMUST00000192536 4367 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm23437-201ENSMUST00000104036 127 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm13428-201ENSMUST00000117540 365 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Rps12-ps5-201ENSMUST00000118272 389 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm6584-201ENSMUST00000119671 447 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm13735-201ENSMUST00000120217 670 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Tmem216-203ENSMUST00000123788 935 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm23891-201ENSMUST00000158114 138 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm25643-201ENSMUST00000158874 103 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm4202-201ENSMUST00000169025 733 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm22701-201ENSMUST00000175371 291 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm23018-201ENSMUST00000177928 109 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm23523-201ENSMUST00000180190 107 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Mir378d-201ENSMUST00000184232 110 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm18501-201ENSMUST00000185363 664 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm29159-201ENSMUST00000187969 379 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Topbp1-ps2-201ENSMUST00000191289 189 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm37381-201ENSMUST00000192427 899 ntTSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Igkv4-75-201ENSMUST00000197204 359 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm43203-201ENSMUST00000200130 558 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm45279-201ENSMUST00000210315 391 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Gm8275-201ENSMUST00000219732 424 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 AC159188.3-201ENSMUST00000224199 880 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 4932702P03Rik-203ENSMUST00000225028 670 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 AC137117.1-201ENSMUST00000226912 441 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 AC122397.3-201ENSMUST00000227097 527 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Glycam1-204ENSMUST00000228895 641 ntBASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Defb11-201ENSMUST00000051965 317 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.34
Pcdhb3Q91XZ7 Olfr350-202ENSMUST00000214457 2022 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Pcdhb3Q91XZ7 Gm38277-201ENSMUST00000195172 1367 ntBASIC6.65□□□□□ -1.35
Pcdhb3Q91XZ7 Mcmdc2-202ENSMUST00000118098 2072 ntTSL 5 BASIC6.65□□□□□ -1.35
Pcdhb3Q91XZ7 Zfp971-202ENSMUST00000108926 1413 ntAPPRIS P1 TSL 3 BASIC6.65□□□□□ -1.35
Pcdhb3Q91XZ7 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.65□□□□□ -1.35
Pcdhb3Q91XZ7 Olfr1417-203ENSMUST00000214887 3582 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Pcdhb3Q91XZ7 Cwf19l1-201ENSMUST00000026218 3574 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Pcdhb3Q91XZ7 Gm37249-201ENSMUST00000195185 2869 ntBASIC6.65□□□□□ -1.35
Pcdhb3Q91XZ7 Olfr293-202ENSMUST00000214401 2852 ntAPPRIS P1 TSL 5 BASIC6.65□□□□□ -1.35
Pcdhb3Q91XZ7 Liph-202ENSMUST00000074230 3703 ntTSL 1 (best) BASIC6.65□□□□□ -1.35
Pcdhb3Q91XZ7 Tmem167-201ENSMUST00000012566 1541 ntTSL 5 BASIC6.65□□□□□ -1.35
Pcdhb3Q91XZ7 Gm10259-201ENSMUST00000091289 1590 ntBASIC6.65□□□□□ -1.35
Pcdhb3Q91XZ7 Cdk14-202ENSMUST00000115450 2386 ntAPPRIS ALT2 TSL 1 (best) BASIC6.65□□□□□ -1.35
Pcdhb3Q91XZ7 Tnfsf10-201ENSMUST00000046383 4993 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Pcdhb3Q91XZ7 Clcn5-201ENSMUST00000004428 8390 ntAPPRIS P1 TSL 1 (best) BASIC6.65□□□□□ -1.35
Pcdhb3Q91XZ7 Pik3c2g-212ENSMUST00000190962 1774 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Gbp4-201ENSMUST00000100962 4538 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Gm32736-201ENSMUST00000200427 2701 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Olfr1412-202ENSMUST00000190505 3663 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Olfr448-203ENSMUST00000214529 2764 ntAPPRIS P1 TSL 5 BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Nr6a1-210ENSMUST00000168098 5877 ntAPPRIS ALT2 TSL 5 BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Gm42869-201ENSMUST00000199953 2121 ntBASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Inpp5f-203ENSMUST00000118605 3220 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Phospho2-206ENSMUST00000180290 3267 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Pcdh15-205ENSMUST00000105429 6719 ntTSL 5 BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Psg16-202ENSMUST00000118367 2282 ntAPPRIS P3 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Fancd2-208ENSMUST00000204827 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Tdrkh-205ENSMUST00000197495 2476 ntTSL 5 BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Gm23424-201ENSMUST00000103889 110 ntBASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Gm11313-201ENSMUST00000118779 432 ntBASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Gm13486-201ENSMUST00000119910 282 ntBASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Gm12094-201ENSMUST00000121781 472 ntBASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Gm12027-201ENSMUST00000146531 949 ntTSL 5 BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 E130111B04Rik-201ENSMUST00000156781 450 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Gm9047-201ENSMUST00000171317 682 ntAPPRIS P1 TSL 1 (best) BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Tnfsf10-202ENSMUST00000174840 989 ntTSL 5 BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Gm20698-201ENSMUST00000175657 233 ntBASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Gm27024-201ENSMUST00000182561 755 ntBASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Gm29414-201ENSMUST00000185379 448 ntTSL 3 BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 BE692007-203ENSMUST00000189306 362 ntTSL 3 BASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 Gm43975-201ENSMUST00000203023 481 ntBASIC6.64□□□□□ -1.35
Pcdhb3Q91XZ7 E230029C05Rik-206ENSMUST00000208547 814 ntTSL 1 (best) BASIC6.64□□□□□ -1.35
Retrieved 100 of 76,532 protein–RNA pairs in 65.2 ms