Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm6162-201ENSMUST00000194870 2930 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm43317-201ENSMUST00000197924 2544 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 AU023762-203ENSMUST00000209897 2179 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Pus10-203ENSMUST00000109525 3177 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Olfr1034-201ENSMUST00000213496 4882 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Ccdc66-201ENSMUST00000050480 2457 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm25765-201ENSMUST00000104100 132 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Sva-202ENSMUST00000117406 645 ntAPPRIS ALT2 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Tmc4-ps-201ENSMUST00000117819 258 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Iltifb-201ENSMUST00000163808 1111 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Vmn2r-ps10-201ENSMUST00000176836 898 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Vmn2r-ps8-201ENSMUST00000177088 898 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm29193-201ENSMUST00000187129 830 ntTSL 3 BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm37001-201ENSMUST00000193377 190 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Rpl36a-ps2-201ENSMUST00000197973 321 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm44463-201ENSMUST00000198895 137 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm7298-201ENSMUST00000204124 4657 ntAPPRIS P1 TSL 5 BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm44294-201ENSMUST00000205090 728 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 n-R5s166-201ENSMUST00000082898 121 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Ang6-201ENSMUST00000096869 444 ntAPPRIS P1 BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Aftph-205ENSMUST00000146722 3763 ntAPPRIS ALT2 TSL 5 BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Gm10287-202ENSMUST00000180599 4059 ntBASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 AC158605.2-201ENSMUST00000220287 2726 ntAPPRIS P1 TSL 2 BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Cyp3a16-201ENSMUST00000031633 1730 ntAPPRIS P1 TSL 1 (best) BASIC3.82□□□□□ -1.8
Col6a6Q8C6K9 Zfp715-202ENSMUST00000048015 4333 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 5830444F18Rik-201ENSMUST00000194009 1992 ntBASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Adam5-205ENSMUST00000209935 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Adgb-206ENSMUST00000208717 4902 ntAPPRIS ALT2 TSL 5 BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Olfr672-202ENSMUST00000213942 1490 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Cd180-204ENSMUST00000171267 1787 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Olfr1262-202ENSMUST00000111508 6068 ntAPPRIS P1 TSL 2 BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Sri-202ENSMUST00000088786 2504 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm25764-201ENSMUST00000104092 134 ntBASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm26019-201ENSMUST00000104407 119 ntBASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Bsph2-201ENSMUST00000108526 532 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm23865-201ENSMUST00000157723 97 ntBASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm27828-201ENSMUST00000184108 119 ntBASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm27899-201ENSMUST00000184715 64 ntBASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm29598-201ENSMUST00000188996 588 ntBASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm28168-201ENSMUST00000191265 2630 ntAPPRIS P1 TSL 5 BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm37791-201ENSMUST00000195081 286 ntBASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm37095-201ENSMUST00000195421 205 ntBASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm42566-201ENSMUST00000197120 643 ntBASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 AC153897.1-201ENSMUST00000213510 470 ntTSL 3 BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 AC123534.1-201ENSMUST00000224060 656 ntBASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Hypm-201ENSMUST00000044987 581 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Mup21-201ENSMUST00000077719 677 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Vmn1r5-202ENSMUST00000226130 3393 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm43329-201ENSMUST00000200120 3232 ntBASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm43000-201ENSMUST00000198482 3343 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm42478-201ENSMUST00000199252 1467 ntBASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm43376-202ENSMUST00000199747 1743 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Zfp131-201ENSMUST00000177916 3067 ntAPPRIS ALT2 TSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Olfr351-201ENSMUST00000100150 933 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm6027-201ENSMUST00000121467 756 ntBASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 1700119I11Rik-201ENSMUST00000122270 336 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm26148-201ENSMUST00000157430 68 ntBASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm7976-201ENSMUST00000181507 1242 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm44946-201ENSMUST00000208425 572 ntBASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Gm18255-201ENSMUST00000211316 765 ntBASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Olfr1152-201ENSMUST00000051058 933 ntAPPRIS P1 BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC3.81□□□□□ -1.8
Col6a6Q8C6K9 AC122357.1-201ENSMUST00000221652 1515 ntBASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Cmah-202ENSMUST00000110391 9789 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Ermn-201ENSMUST00000090940 3635 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Oog4-202ENSMUST00000073641 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Gm11639-203ENSMUST00000212287 17665 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Gm45176-201ENSMUST00000207696 4096 ntBASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Gm43781-201ENSMUST00000197634 2681 ntBASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Vmn1r214-202ENSMUST00000227236 3892 ntAPPRIS P1 BASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Myo3a-201ENSMUST00000044749 5082 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Gm26273-201ENSMUST00000104180 131 ntBASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Gm15981-201ENSMUST00000119196 457 ntBASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Gm23112-201ENSMUST00000158606 125 ntBASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Gm29452-201ENSMUST00000187996 313 ntBASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Gm28860-201ENSMUST00000188103 313 ntBASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Scgb2b6-201ENSMUST00000188132 330 ntBASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Gm37073-201ENSMUST00000192469 1222 ntBASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Gm8023-201ENSMUST00000195298 903 ntBASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Gm43084-201ENSMUST00000200696 947 ntBASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Gm45080-201ENSMUST00000206648 283 ntBASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Gm4501-201ENSMUST00000207330 551 ntBASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Gm4558-201ENSMUST00000207886 521 ntBASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Olfr200-ps1-201ENSMUST00000207964 874 ntBASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 4930540M03Rik-201ENSMUST00000216952 437 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 CT025536.1-201ENSMUST00000226744 844 ntBASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 AC165106.3-201ENSMUST00000228191 3843 ntBASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Olfr1377-203ENSMUST00000216101 1990 ntAPPRIS P1 TSL 3 BASIC3.8□□□□□ -1.8
Col6a6Q8C6K9 Gm7451-201ENSMUST00000208382 1392 ntBASIC3.8□□□□□ -1.8
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms