Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Mir6361-201ENSMUST00000185079 101 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 1810053B23Rik-201ENSMUST00000185242 634 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Mrgprc1-ps-201ENSMUST00000185552 952 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Vmn2r-ps149-201ENSMUST00000188423 590 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm29341-201ENSMUST00000190179 370 ntTSL 5 BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Ighv8-5-201ENSMUST00000194257 358 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm42886-201ENSMUST00000199214 466 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm44870-201ENSMUST00000207291 357 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm17990-201ENSMUST00000211728 553 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Prl2c5-201ENSMUST00000021778 844 ntAPPRIS P3 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 1700048P04Rik-201ENSMUST00000219825 369 ntTSL 3 BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gstk1-201ENSMUST00000031897 930 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Olfr348-201ENSMUST00000056865 942 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Olfr486-201ENSMUST00000072035 945 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Olfr875-201ENSMUST00000080634 1004 ntAPPRIS P1 BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Snord38a-201ENSMUST00000083746 71 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Xpnpep3-203ENSMUST00000163754 5383 ntAPPRIS P1 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Lpin2-203ENSMUST00000126681 4167 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Ranbp17-201ENSMUST00000037522 3950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Vmn1r90-208ENSMUST00000227788 7018 ntAPPRIS P2 BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Glrx2-204ENSMUST00000129653 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm37250-201ENSMUST00000194919 2388 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm15354-201ENSMUST00000132019 1772 ntTSL 1 (best) BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Gm11516-201ENSMUST00000118450 1582 ntBASIC6.82□□□□□ -1.32
Trim47Q8C0E3 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC6.82□□□□□ -1.32
Trim47Q8C0E3 Olfr571-202ENSMUST00000214160 4999 ntAPPRIS P1 TSL 5 BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Sult1c2-201ENSMUST00000023886 1846 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gtpbp4-204ENSMUST00000222098 8783 ntAPPRIS P1 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm37041-201ENSMUST00000195873 3853 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Vmn1r6-204ENSMUST00000227188 8185 ntAPPRIS ALT2 BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm19667-201ENSMUST00000188984 3334 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm25415-201ENSMUST00000104220 132 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm7164-201ENSMUST00000117503 450 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm13811-201ENSMUST00000117800 256 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm11577-201ENSMUST00000118030 737 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm11833-201ENSMUST00000118393 853 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm12543-201ENSMUST00000120410 543 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Snora81-201ENSMUST00000157310 178 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm26486-201ENSMUST00000158021 110 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm24733-201ENSMUST00000158863 253 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Rpl29-ps5-201ENSMUST00000164794 477 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm17421-201ENSMUST00000167845 674 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm20698-201ENSMUST00000175657 233 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm22348-201ENSMUST00000178674 79 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 1700101I11Rik-201ENSMUST00000181594 896 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 9430002A10Rik-202ENSMUST00000185395 475 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm29111-201ENSMUST00000188823 696 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm28584-201ENSMUST00000191489 696 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm38138-201ENSMUST00000193274 696 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm35013-201ENSMUST00000197218 832 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm44040-201ENSMUST00000203360 545 ntTSL 3 BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm44239-201ENSMUST00000204228 271 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm44580-201ENSMUST00000206333 877 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm44858-201ENSMUST00000207360 154 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm45646-201ENSMUST00000210983 441 ntTSL 5 BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm45588-201ENSMUST00000211213 630 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Olfr976-204ENSMUST00000217630 2952 ntAPPRIS ALT2 TSL 5 BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm4489-201ENSMUST00000219576 517 ntTSL 2 BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 AC139350.4-201ENSMUST00000228483 798 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Snord42a-201ENSMUST00000082606 65 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Gm24454-201ENSMUST00000083349 132 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 AC134596.1-201ENSMUST00000222016 1922 ntBASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Pnpla8-202ENSMUST00000122902 2728 ntAPPRIS ALT2 TSL 1 (best) BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 5830444B04Rik-204ENSMUST00000166921 2870 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Olfr1340-204ENSMUST00000217334 2001 ntAPPRIS P1 TSL 3 BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Atf2-206ENSMUST00000112016 3943 ntTSL 1 (best) BASIC6.81□□□□□ -1.32
Trim47Q8C0E3 Exph5-201ENSMUST00000051014 5957 ntAPPRIS P1 TSL 1 (best) BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 AC155243.1-201ENSMUST00000220141 2262 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 AC110043.1-201ENSMUST00000220278 1627 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Cnot4-201ENSMUST00000044163 3337 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 A930006L05Rik-201ENSMUST00000186821 2814 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Asap1-208ENSMUST00000176014 3435 ntAPPRIS ALT2 TSL 5 BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Ift80-201ENSMUST00000029347 3880 ntAPPRIS P1 TSL 5 BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm23440-201ENSMUST00000104299 130 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm8217-201ENSMUST00000119136 465 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm8317-201ENSMUST00000121261 471 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm13356-201ENSMUST00000121678 335 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm15866-201ENSMUST00000149048 785 ntTSL 5 BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm23225-201ENSMUST00000158121 114 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm25013-201ENSMUST00000158402 128 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm24875-201ENSMUST00000158888 104 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm24081-201ENSMUST00000175177 125 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 1600029O15Rik-201ENSMUST00000178259 517 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Rpain-213ENSMUST00000178822 566 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Lncenc1-202ENSMUST00000179324 2764 ntTSL 2 BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Spata17-208ENSMUST00000184543 667 ntTSL 1 (best) BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 4930553J12Rik-202ENSMUST00000187823 851 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm28501-201ENSMUST00000188729 421 ntTSL 2 BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm37803-201ENSMUST00000191620 711 ntTSL 5 BASIC6.8□□□□□ -1.32
Trim47Q8C0E3 Gm38291-201ENSMUST00000193671 259 ntBASIC6.8□□□□□ -1.32
Trim47Q8C0E3 4931440P22Rik-205ENSMUST00000194448 474 ntBASIC6.8□□□□□ -1.32
Retrieved 100 of 76,532 protein–RNA pairs in 92.7 ms