Protein–RNA interactions for Protein: Q6ZPL9

Ddx55, ATP-dependent RNA helicase DDX55, mousemouse

Known RBP Predictions only

Length 600 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55Q6ZPL9 Gm5039-202ENSMUST00000218054 1856 ntAPPRIS P1 TSL 2 BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Vmn2r116-201ENSMUST00000164856 2571 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Abca12-201ENSMUST00000087268 9137 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Vmn1r71-206ENSMUST00000228098 7165 ntAPPRIS P2 BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Olfr828-202ENSMUST00000215380 1689 ntAPPRIS P1 TSL 3 BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 A630010A05Rik-201ENSMUST00000100165 684 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Mir804-201ENSMUST00000103251 95 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Smpx-203ENSMUST00000112521 898 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm12423-201ENSMUST00000118334 135 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm15772-201ENSMUST00000118533 438 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm11699-201ENSMUST00000119016 401 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm13815-201ENSMUST00000119963 412 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Vmn1r-ps100-201ENSMUST00000120610 867 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm12880-201ENSMUST00000120652 494 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm15227-201ENSMUST00000121844 399 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Klra11-ps-201ENSMUST00000122033 810 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Scarna10-201ENSMUST00000158992 325 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm20456-201ENSMUST00000174690 385 ntTSL 5 BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Obox4-ps26-201ENSMUST00000176368 724 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm20795-201ENSMUST00000178528 699 ntAPPRIS P1 BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm27611-201ENSMUST00000184690 108 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm28191-201ENSMUST00000189112 211 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Tmem167-ps1-201ENSMUST00000191236 214 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm37966-201ENSMUST00000193122 326 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm42982-201ENSMUST00000198574 687 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Sult1c2-ps1-201ENSMUST00000200231 164 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm40323-201ENSMUST00000200649 645 ntTSL 2 BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm43228-201ENSMUST00000200735 264 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm45029-201ENSMUST00000208702 391 ntTSL 5 BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm19921-201ENSMUST00000210505 703 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm36247-201ENSMUST00000211834 285 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm46136-201ENSMUST00000214730 565 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm39348-202ENSMUST00000217239 375 ntTSL 2 BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 AC157515.1-201ENSMUST00000220953 450 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 AC154552.5-201ENSMUST00000222352 207 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm5185-201ENSMUST00000080271 619 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm23623-201ENSMUST00000082461 107 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Mier1-202ENSMUST00000097945 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Agbl2-202ENSMUST00000037219 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Prrc2c-202ENSMUST00000182149 11289 ntAPPRIS ALT2 TSL 5 BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm43369-201ENSMUST00000196373 1552 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Gm12633-201ENSMUST00000117742 1705 ntBASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Cd53-201ENSMUST00000038845 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Vmn1r90-206ENSMUST00000227566 6901 ntAPPRIS ALT2 BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Fam205a3-201ENSMUST00000178192 3927 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Fam205a2-202ENSMUST00000180201 3927 ntAPPRIS P1 TSL 5 BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Tug1-202ENSMUST00000144852 4720 ntTSL 1 (best) BASIC5.79□□□□□ -1.48
Ddx55Q6ZPL9 Ptgs2os-202ENSMUST00000181915 2937 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Nop58-215ENSMUST00000191142 9507 ntAPPRIS P2 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Gm11823-201ENSMUST00000130582 2278 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Olfr736-205ENSMUST00000215263 2255 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Ktn1-203ENSMUST00000185940 3869 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Ktn1-208ENSMUST00000187039 3875 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Gm4596-201ENSMUST00000117197 442 ntBASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Olfr1149-ps1-201ENSMUST00000118232 691 ntBASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Gm15193-201ENSMUST00000120224 865 ntBASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Gm11584-201ENSMUST00000120636 325 ntBASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Gm11761-201ENSMUST00000121392 445 ntBASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Gm6650-201ENSMUST00000166710 614 ntBASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Gm18594-201ENSMUST00000175733 1403 ntBASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Gm20701-201ENSMUST00000176082 347 ntBASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Gm23145-201ENSMUST00000178912 79 ntBASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Gm4707-202ENSMUST00000183937 276 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 1700060O08Rik-201ENSMUST00000185390 281 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Gm28113-201ENSMUST00000188280 229 ntBASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 1700072G22Rik-201ENSMUST00000189460 548 ntTSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Gm18382-201ENSMUST00000194394 582 ntBASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Igkv13-82-201ENSMUST00000200308 346 ntBASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Arl8b-202ENSMUST00000204483 695 ntTSL 3 BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Olfr1142-ps1-201ENSMUST00000213624 805 ntBASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Cwc15-202ENSMUST00000213913 831 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Mbd3l1-203ENSMUST00000215255 708 ntAPPRIS P1 TSL 3 BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 AC158523.2-201ENSMUST00000222708 548 ntBASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 AC141425.1-201ENSMUST00000224989 265 ntBASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 AC114916.1-201ENSMUST00000228465 494 ntBASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Tas2r124-201ENSMUST00000076150 930 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Vmn1r33-201ENSMUST00000079678 1036 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Mir412-201ENSMUST00000083636 80 ntBASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Olfr78-204ENSMUST00000217123 4695 ntAPPRIS P1 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 AC121997.2-201ENSMUST00000228095 2294 ntBASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Olfr390-204ENSMUST00000215161 3740 ntAPPRIS P1 TSL 5 BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Zfp426-208ENSMUST00000166005 1653 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Emcn-201ENSMUST00000119475 1357 ntAPPRIS P3 TSL 1 (best) BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Nlgn1-201ENSMUST00000075054 4359 ntAPPRIS P3 TSL 5 BASIC5.78□□□□□ -1.48
Ddx55Q6ZPL9 Gm8979-201ENSMUST00000183386 7296 ntBASIC5.77□□□□□ -1.48
Retrieved 100 of 76,532 protein–RNA pairs in 94.1 ms