Protein–RNA interactions for Protein: Q69ZI1

Sh3rf1, E3 ubiquitin-protein ligase SH3RF1, mousemouse

Predictions only

Length 892 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1Q69ZI1 Gm22599-201ENSMUST00000157597 132 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm24395-201ENSMUST00000158139 125 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 R3hcc1l-202ENSMUST00000160107 950 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm26426-201ENSMUST00000177866 123 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm26060-201ENSMUST00000180094 123 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm26537-201ENSMUST00000181474 652 ntTSL 3 BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm26923-201ENSMUST00000182615 996 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm27188-201ENSMUST00000184383 510 ntTSL 3 BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm28058-201ENSMUST00000186421 264 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm29148-201ENSMUST00000188140 336 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm29111-201ENSMUST00000188823 696 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm29489-201ENSMUST00000188934 324 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm28151-201ENSMUST00000189404 951 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm29592-201ENSMUST00000189434 370 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm19261-201ENSMUST00000189628 539 ntTSL 2 BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm21524-201ENSMUST00000190499 696 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm21715-201ENSMUST00000191056 694 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm28584-201ENSMUST00000191489 696 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm37784-201ENSMUST00000193233 189 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm38138-201ENSMUST00000193274 696 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Ighv1-44-201ENSMUST00000195597 352 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm44274-201ENSMUST00000203417 256 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm30928-201ENSMUST00000205858 459 ntTSL 3 BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm44852-201ENSMUST00000207950 369 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 4930518J21Rik-201ENSMUST00000209557 573 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm45523-201ENSMUST00000210712 799 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm40787-201ENSMUST00000218056 317 ntTSL 3 BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 AC121788.1-201ENSMUST00000218514 1046 ntTSL 5 BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 AC101677.1-201ENSMUST00000218590 158 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 4930549C15Rik-201ENSMUST00000221235 1260 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm2614-201ENSMUST00000223227 403 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 AC125405.1-201ENSMUST00000226406 589 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 AC160120.1-201ENSMUST00000227446 663 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr697-201ENSMUST00000050541 1047 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr309-201ENSMUST00000055690 927 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr476-201ENSMUST00000077249 933 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm6020-201ENSMUST00000092094 66 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm10794-201ENSMUST00000099624 207 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Olfr1049-201ENSMUST00000099899 953 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Slc24a2-203ENSMUST00000107157 10531 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Vmn1r45-204ENSMUST00000227426 3205 ntAPPRIS P1 BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm26740-202ENSMUST00000181532 1531 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Aspa-201ENSMUST00000021119 1530 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm43921-201ENSMUST00000204296 1792 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm37311-201ENSMUST00000195541 2024 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm43627-201ENSMUST00000197119 2299 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm26789-201ENSMUST00000181342 2502 ntTSL 5 BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm14399-204ENSMUST00000109060 1911 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Tcerg1-201ENSMUST00000025375 4152 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Xpo1-204ENSMUST00000109551 4906 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm21955-201ENSMUST00000194137 4968 ntBASIC5.97□□□□□ -1.45
Sh3rf1Q69ZI1 Gm19035-201ENSMUST00000193299 1742 ntBASIC5.96□□□□□ -1.45
Sh3rf1Q69ZI1 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC5.96□□□□□ -1.45
Sh3rf1Q69ZI1 CT009754.3-201ENSMUST00000220739 3661 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Sh3rf1Q69ZI1 AC127281.1-201ENSMUST00000221075 3667 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Sh3rf1Q69ZI1 Gm2381-201ENSMUST00000174558 4073 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
Sh3rf1Q69ZI1 Enox2-201ENSMUST00000033437 3170 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
Sh3rf1Q69ZI1 Gm2223-201ENSMUST00000112099 1350 ntBASIC5.96□□□□□ -1.45
Sh3rf1Q69ZI1 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 2310002F09Rik-202ENSMUST00000181551 2468 ntTSL 5 BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm35066-201ENSMUST00000198898 2074 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm2987-201ENSMUST00000187673 1693 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Mir297a-2-201ENSMUST00000103795 90 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 4933413L06Rik-202ENSMUST00000111588 922 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Taf7l-202ENSMUST00000113223 1155 ntTSL 5 BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm22714-201ENSMUST00000116894 78 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm15113-201ENSMUST00000119280 836 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm14392-201ENSMUST00000120332 401 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm12607-201ENSMUST00000120724 493 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Mrpl24-203ENSMUST00000121048 1234 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Fam229b-205ENSMUST00000135785 674 ntAPPRIS P1 TSL 3 BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm12065-201ENSMUST00000149592 656 ntTSL 3 BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm14325-202ENSMUST00000150650 310 ntTSL 2 BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 1700019E08Rik-202ENSMUST00000153567 635 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Snora81-201ENSMUST00000157310 178 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm22210-201ENSMUST00000158101 144 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Igkv19-93-201ENSMUST00000183936 344 ntAPPRIS ALT2 BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm17946-201ENSMUST00000186856 538 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm28629-201ENSMUST00000187309 263 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm28777-201ENSMUST00000191402 535 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm37265-201ENSMUST00000191698 885 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm22897-202ENSMUST00000197782 127 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm44385-201ENSMUST00000198781 81 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 n-TStga1-201ENSMUST00000199903 109 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm6850-201ENSMUST00000210031 530 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm9292-201ENSMUST00000222008 710 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 AC154527.1-201ENSMUST00000225809 242 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Ear2-201ENSMUST00000074839 719 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm9772-201ENSMUST00000075018 408 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm24144-201ENSMUST00000082632 111 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm23686-201ENSMUST00000083241 164 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Olfr671-202ENSMUST00000210963 3157 ntTSL 5 BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Dnhd1-203ENSMUST00000145988 14536 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm6288-201ENSMUST00000100778 1590 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm11516-201ENSMUST00000118450 1582 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Gm45311-201ENSMUST00000211086 1330 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 AC158388.2-201ENSMUST00000223665 1314 ntBASIC5.96□□□□□ -1.46
Sh3rf1Q69ZI1 Daw1-202ENSMUST00000065436 1349 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 98.9 ms