Protein–RNA interactions for Protein: P35123

Usp4, Ubiquitin carboxyl-terminal hydrolase 4, mousemouse

Predictions only

Length 962 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp4P35123 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC5.72□□□□□ -1.49
Usp4P35123 Lrif1-203ENSMUST00000106736 1669 ntTSL 1 (best) BASIC5.72□□□□□ -1.49
Usp4P35123 Gm43121-201ENSMUST00000199065 1305 ntBASIC5.72□□□□□ -1.49
Usp4P35123 Scn1a-203ENSMUST00000112366 8386 ntAPPRIS ALT1 TSL 5 BASIC5.72□□□□□ -1.49
Usp4P35123 Rbm46-202ENSMUST00000182637 2058 ntTSL 5 BASIC5.71□□□□□ -1.49
Usp4P35123 Ehf-203ENSMUST00000111176 3696 ntTSL 5 BASIC5.71□□□□□ -1.49
Usp4P35123 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.71□□□□□ -1.49
Usp4P35123 Gm14296-201ENSMUST00000099007 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Usp4P35123 2210418O10Rik-201ENSMUST00000099009 3823 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.49
Usp4P35123 Dnah14-209ENSMUST00000208001 13696 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.49
Usp4P35123 9230109A22Rik-202ENSMUST00000228644 1853 ntBASIC5.71□□□□□ -1.5
Usp4P35123 Phkb-201ENSMUST00000053771 5351 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp4P35123 Zfp935-201ENSMUST00000076195 1631 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp4P35123 Olfr78-201ENSMUST00000060187 3410 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp4P35123 AC102847.2-201ENSMUST00000227799 2906 ntBASIC5.71□□□□□ -1.5
Usp4P35123 Chd9-202ENSMUST00000109614 11565 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Usp4P35123 Vmn1r185-209ENSMUST00000228133 5749 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Usp4P35123 Vmn1r-ps108-201ENSMUST00000117059 365 ntBASIC5.71□□□□□ -1.5
Usp4P35123 Gm11410-201ENSMUST00000120053 1143 ntBASIC5.71□□□□□ -1.5
Usp4P35123 n-R5s207-201ENSMUST00000122497 118 ntBASIC5.71□□□□□ -1.5
Usp4P35123 Gm23885-201ENSMUST00000122682 294 ntBASIC5.71□□□□□ -1.5
Usp4P35123 C030037D09Rik-201ENSMUST00000125967 367 ntTSL 5 BASIC5.71□□□□□ -1.5
Usp4P35123 Crem-216ENSMUST00000136961 807 ntTSL 5 BASIC5.71□□□□□ -1.5
Usp4P35123 Gm12925-203ENSMUST00000140510 665 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp4P35123 Gm23981-201ENSMUST00000157136 106 ntBASIC5.71□□□□□ -1.5
Usp4P35123 Gm22529-201ENSMUST00000158817 123 ntBASIC5.71□□□□□ -1.5
Usp4P35123 Gstm5-202ENSMUST00000167387 599 ntTSL 5 BASIC5.71□□□□□ -1.5
Usp4P35123 Gm17206-201ENSMUST00000168123 577 ntTSL 5 BASIC5.71□□□□□ -1.5
Usp4P35123 Gm6647-201ENSMUST00000170514 641 ntBASIC5.71□□□□□ -1.5
Usp4P35123 Gm17268-201ENSMUST00000171515 66 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Usp4P35123 Gm6900-201ENSMUST00000178971 342 ntBASIC5.71□□□□□ -1.5
Usp4P35123 Gm8941-201ENSMUST00000181451 899 ntBASIC5.71□□□□□ -1.5
Usp4P35123 Gm8676-201ENSMUST00000184206 637 ntBASIC5.71□□□□□ -1.5
Usp4P35123 Gm27539-201ENSMUST00000184971 224 ntBASIC5.71□□□□□ -1.5
Usp4P35123 Gm28661-201ENSMUST00000188231 681 ntBASIC5.71□□□□□ -1.5
Usp4P35123 Gm28883-201ENSMUST00000189256 369 ntBASIC5.71□□□□□ -1.5
Usp4P35123 4930532M18Rik-202ENSMUST00000190980 534 ntTSL 3 BASIC5.71□□□□□ -1.5
Usp4P35123 Gm37340-201ENSMUST00000193124 759 ntTSL 5 BASIC5.71□□□□□ -1.5
Usp4P35123 Gm8325-202ENSMUST00000193411 182 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp4P35123 Gm42961-201ENSMUST00000202023 181 ntBASIC5.71□□□□□ -1.5
Usp4P35123 Gm5886-201ENSMUST00000203420 641 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp4P35123 Gm45157-201ENSMUST00000208729 401 ntBASIC5.71□□□□□ -1.5
Usp4P35123 Gm45604-201ENSMUST00000209665 550 ntTSL 1 (best) BASIC5.71□□□□□ -1.5
Usp4P35123 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC5.71□□□□□ -1.5
Usp4P35123 Gm45874-201ENSMUST00000212423 346 ntBASIC5.71□□□□□ -1.5
Usp4P35123 Gm45830-201ENSMUST00000212945 344 ntTSL 5 BASIC5.71□□□□□ -1.5
Usp4P35123 Olfr953-ps1-201ENSMUST00000214463 892 ntBASIC5.71□□□□□ -1.5
Usp4P35123 AC132384.3-201ENSMUST00000219709 472 ntBASIC5.71□□□□□ -1.5
Usp4P35123 CT030170.4-202ENSMUST00000221109 540 ntBASIC5.71□□□□□ -1.5
Usp4P35123 AC165347.1-201ENSMUST00000224089 1025 ntBASIC5.71□□□□□ -1.5
Usp4P35123 AC112142.1-206ENSMUST00000228136 982 ntBASIC5.71□□□□□ -1.5
Usp4P35123 Olfr1020-201ENSMUST00000055840 1079 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Usp4P35123 Mbd3l1-201ENSMUST00000069218 850 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp4P35123 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp4P35123 Olfr1164-201ENSMUST00000099834 1112 ntAPPRIS P1 BASIC5.71□□□□□ -1.5
Usp4P35123 Zfp934-203ENSMUST00000220648 2439 ntTSL 5 BASIC5.71□□□□□ -1.5
Usp4P35123 Olfr947-ps1-201ENSMUST00000214075 2165 ntAPPRIS P1 TSL 3 BASIC5.71□□□□□ -1.5
Usp4P35123 Hgf-204ENSMUST00000199581 3468 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp4P35123 Scn1a-204ENSMUST00000112371 8287 ntAPPRIS ALT1 TSL 5 BASIC5.71□□□□□ -1.5
Usp4P35123 C230071H17Rik-201ENSMUST00000196044 2973 ntBASIC5.71□□□□□ -1.5
Usp4P35123 Slco1a1-202ENSMUST00000168119 3904 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp4P35123 Clec9a-201ENSMUST00000058352 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp4P35123 Ash1l-201ENSMUST00000090933 11268 ntAPPRIS P1 TSL 5 BASIC5.71□□□□□ -1.5
Usp4P35123 Epha3-201ENSMUST00000064405 5659 ntAPPRIS P1 TSL 1 (best) BASIC5.71□□□□□ -1.5
Usp4P35123 Olfr250-202ENSMUST00000216168 3969 ntAPPRIS ALT2 TSL 5 BASIC5.71□□□□□ -1.5
Usp4P35123 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC5.71□□□□□ -1.5
Usp4P35123 Olfr441-202ENSMUST00000213649 2402 ntAPPRIS P1 TSL 3 BASIC5.7□□□□□ -1.5
Usp4P35123 Gm44894-201ENSMUST00000205280 2174 ntBASIC5.7□□□□□ -1.5
Usp4P35123 Gm42436-201ENSMUST00000198804 3656 ntBASIC5.7□□□□□ -1.5
Usp4P35123 Vmn1r35-205ENSMUST00000227961 1789 ntBASIC5.7□□□□□ -1.5
Usp4P35123 AC112142.1-203ENSMUST00000228670 2472 ntBASIC5.7□□□□□ -1.5
Usp4P35123 Ube2u-202ENSMUST00000133493 1537 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Usp4P35123 Slc22a22-202ENSMUST00000110196 2368 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Usp4P35123 Gm14643-201ENSMUST00000144412 1848 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Usp4P35123 Nipal1-201ENSMUST00000087212 4206 ntAPPRIS P1 TSL 1 (best) BASIC5.7□□□□□ -1.5
Usp4P35123 Nlrp1b-202ENSMUST00000108514 3541 ntAPPRIS ALT2 TSL 5 BASIC5.7□□□□□ -1.5
Usp4P35123 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.7□□□□□ -1.5
Usp4P35123 AY512915-203ENSMUST00000159937 3650 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Usp4P35123 Olfr1058-201ENSMUST00000102631 951 ntAPPRIS P1 BASIC5.7□□□□□ -1.5
Usp4P35123 Gm23910-201ENSMUST00000104597 132 ntBASIC5.7□□□□□ -1.5
Usp4P35123 Gm22194-201ENSMUST00000116869 95 ntBASIC5.7□□□□□ -1.5
Usp4P35123 Gm14808-201ENSMUST00000129259 361 ntTSL 3 BASIC5.7□□□□□ -1.5
Usp4P35123 Ptprtos-201ENSMUST00000151688 630 ntTSL 1 (best) BASIC5.7□□□□□ -1.5
Usp4P35123 Gm23280-201ENSMUST00000157905 139 ntBASIC5.7□□□□□ -1.5
Usp4P35123 Gm22519-201ENSMUST00000158270 178 ntBASIC5.7□□□□□ -1.5
Usp4P35123 Vmn2r-ps4-201ENSMUST00000176989 1015 ntBASIC5.7□□□□□ -1.5
Usp4P35123 Gm27201-201ENSMUST00000183818 416 ntTSL 3 BASIC5.7□□□□□ -1.5
Usp4P35123 Gm29570-201ENSMUST00000185813 681 ntTSL 3 BASIC5.7□□□□□ -1.5
Usp4P35123 Gm7654-201ENSMUST00000186738 683 ntBASIC5.7□□□□□ -1.5
Usp4P35123 Gm28412-201ENSMUST00000187243 177 ntBASIC5.7□□□□□ -1.5
Usp4P35123 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.7□□□□□ -1.5
Usp4P35123 Gm38353-201ENSMUST00000192351 617 ntTSL 3 BASIC5.7□□□□□ -1.5
Usp4P35123 Gm36999-201ENSMUST00000192756 1046 ntBASIC5.7□□□□□ -1.5
Usp4P35123 Gm38015-201ENSMUST00000193048 188 ntBASIC5.7□□□□□ -1.5
Usp4P35123 Gm37681-201ENSMUST00000193880 727 ntBASIC5.7□□□□□ -1.5
Usp4P35123 2900002M20Rik-201ENSMUST00000195754 330 ntBASIC5.7□□□□□ -1.5
Usp4P35123 Trav3-2-201ENSMUST00000198999 305 ntBASIC5.7□□□□□ -1.5
Usp4P35123 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC5.7□□□□□ -1.5
Usp4P35123 Gm43487-201ENSMUST00000200331 1031 ntBASIC5.7□□□□□ -1.5
Usp4P35123 Gm43580-201ENSMUST00000202892 284 ntBASIC5.7□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 67.6 ms