Protein–RNA interactions for Protein: P09027

Hoxd3, Homeobox protein Hox-D3, mousemouse

Predictions only

Length 433 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxd3P09027 Tlr11-201ENSMUST00000063570 2993 ntAPPRIS ALT2 BASIC5.25□□□□□ -1.57
Hoxd3P09027 Pkd1l3-202ENSMUST00000109242 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Mttp-202ENSMUST00000098580 3072 ntTSL 5 BASIC5.25□□□□□ -1.57
Hoxd3P09027 Synb-201ENSMUST00000059362 4055 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Aox1-201ENSMUST00000001027 4423 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Lats1-203ENSMUST00000217931 4186 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Lats1-201ENSMUST00000040043 4155 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Hoxd3P09027 Pcsk1-201ENSMUST00000022075 5040 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Vmn2r55-201ENSMUST00000167771 1407 ntTSL 5 BASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm29260-201ENSMUST00000186391 2759 ntTSL 3 BASIC5.25□□□□□ -1.57
Hoxd3P09027 Adgrf5-201ENSMUST00000113599 8535 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Hoxd3P09027 Cfap61-206ENSMUST00000133433 3998 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Hoxd3P09027 Lipn-201ENSMUST00000025682 1502 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Csde1-201ENSMUST00000029446 4318 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Olfr160-201ENSMUST00000104875 930 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm12653-201ENSMUST00000117778 561 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm14774-201ENSMUST00000117857 536 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 Hmgb1-ps4-201ENSMUST00000118281 635 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm11553-201ENSMUST00000120682 240 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm14049-201ENSMUST00000121009 636 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm13406-201ENSMUST00000121991 256 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 1700054M17Rik-201ENSMUST00000125654 445 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Rapgef4os1-201ENSMUST00000126462 638 ntTSL 3 BASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm15217-202ENSMUST00000141358 347 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm16343-201ENSMUST00000162027 410 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm24819-201ENSMUST00000175094 166 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm23810-201ENSMUST00000175150 74 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm21834-201ENSMUST00000178907 453 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm5935-202ENSMUST00000178986 639 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm9443-201ENSMUST00000188406 816 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm28846-201ENSMUST00000189161 368 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm6693-201ENSMUST00000189583 813 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm19726-201ENSMUST00000205008 240 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 A530021J07Rik-203ENSMUST00000208111 308 ntTSL 2 BASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm45313-201ENSMUST00000210584 178 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 Selenok-ps5-201ENSMUST00000221048 278 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 Olfr151-202ENSMUST00000221099 929 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm5955-201ENSMUST00000222712 219 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 AC164618.3-201ENSMUST00000224863 681 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 AC117656.1-201ENSMUST00000225826 339 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Mir484-201ENSMUST00000093566 67 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 Adgrg6-203ENSMUST00000208429 3582 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
Hoxd3P09027 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm4070-201ENSMUST00000106766 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Gvin1-201ENSMUST00000006667 8795 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Pramel7-201ENSMUST00000026957 1861 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Olfr430-203ENSMUST00000214390 3300 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Hoxd3P09027 Sntg1-210ENSMUST00000191683 4510 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Map7d2-201ENSMUST00000043151 3087 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Fmn1-209ENSMUST00000161731 4262 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Fam47c-201ENSMUST00000105110 1639 ntAPPRIS P1 BASIC5.25□□□□□ -1.57
Hoxd3P09027 Msantd4-202ENSMUST00000212075 2800 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Gm37195-201ENSMUST00000192006 3018 ntBASIC5.25□□□□□ -1.57
Hoxd3P09027 Arid5b-203ENSMUST00000218532 3025 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Sdr16c6-201ENSMUST00000095151 1834 ntAPPRIS P1 TSL 5 BASIC5.25□□□□□ -1.57
Hoxd3P09027 Gtf2h1-202ENSMUST00000107644 2187 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
Hoxd3P09027 Ank3-230ENSMUST00000182795 3557 ntTSL 5 BASIC5.25□□□□□ -1.57
Hoxd3P09027 Adgrl2-215ENSMUST00000199750 4399 ntTSL 5 BASIC5.25□□□□□ -1.57
Hoxd3P09027 Slc17a1-201ENSMUST00000006785 2026 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hoxd3P09027 3732407C23Rik-201ENSMUST00000222770 3540 ntBASIC5.24□□□□□ -1.57
Hoxd3P09027 Pramef25-201ENSMUST00000105766 1684 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
Hoxd3P09027 Golph3l-207ENSMUST00000177390 2836 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hoxd3P09027 Vmn1r86-204ENSMUST00000227700 5487 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Hoxd3P09027 Ntrk3-202ENSMUST00000039438 3977 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hoxd3P09027 Abcc9-201ENSMUST00000073173 7433 ntAPPRIS ALT2 TSL 5 BASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm38335-201ENSMUST00000195727 1789 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hoxd3P09027 Iqch-202ENSMUST00000080527 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hoxd3P09027 Nfib-201ENSMUST00000050872 8770 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hoxd3P09027 Chil3-201ENSMUST00000063062 1539 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm37244-201ENSMUST00000191748 1981 ntBASIC5.24□□□□□ -1.57
Hoxd3P09027 Ftx-205ENSMUST00000156211 4215 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hoxd3P09027 A630001G21Rik-202ENSMUST00000159122 2053 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hoxd3P09027 Vwa5a-202ENSMUST00000118144 3502 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hoxd3P09027 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm15681-201ENSMUST00000137501 2704 ntBASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm44586-201ENSMUST00000207166 2737 ntBASIC5.24□□□□□ -1.57
Hoxd3P09027 Heph-201ENSMUST00000033553 4743 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm26518-201ENSMUST00000181328 3270 ntTSL 5 BASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm24715-201ENSMUST00000102377 95 ntBASIC5.24□□□□□ -1.57
Hoxd3P09027 Igkv13-84-201ENSMUST00000103339 347 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
Hoxd3P09027 Ighv1-18-201ENSMUST00000103504 306 ntAPPRIS ALT2 BASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm23768-201ENSMUST00000104440 131 ntBASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm13046-201ENSMUST00000117391 501 ntBASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm15216-201ENSMUST00000118058 277 ntBASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm12442-201ENSMUST00000118372 338 ntBASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm12042-201ENSMUST00000120479 301 ntBASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm15801-201ENSMUST00000120920 522 ntBASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm11472-201ENSMUST00000121305 556 ntBASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm13363-201ENSMUST00000122008 522 ntBASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm14271-201ENSMUST00000137886 630 ntTSL 3 BASIC5.24□□□□□ -1.57
Hoxd3P09027 4933411O13Rik-203ENSMUST00000146849 607 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm11466-201ENSMUST00000148017 291 ntTSL 3 BASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm22523-201ENSMUST00000158696 100 ntBASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm8783-201ENSMUST00000159764 522 ntBASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm15970-201ENSMUST00000160623 834 ntBASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm16333-201ENSMUST00000161416 318 ntTSL 3 BASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm9294-201ENSMUST00000165198 789 ntBASIC5.24□□□□□ -1.57
Hoxd3P09027 Gm20454-201ENSMUST00000172713 221 ntBASIC5.24□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 136.6 ms