Protein–RNA interactions for Protein: O54879

Hmgb3, High mobility group protein B3, mousemouse

Known RBP Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb3O54879 AC079644.1-201ENSMUST00000220586 405 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm46996-201ENSMUST00000220924 408 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm6562-201ENSMUST00000221903 464 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 AC107369.1-201ENSMUST00000227373 860 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 CT025525.4-201ENSMUST00000227728 277 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC3.51□□□□□ -1.85
Hmgb3O54879 Fabp9-201ENSMUST00000029038 583 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Hmgb3O54879 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Hmgb3O54879 Ang5-201ENSMUST00000066719 700 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Hmgb3O54879 Prelid2-201ENSMUST00000070949 724 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Hmgb3O54879 Gm23330-201ENSMUST00000082660 164 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 Olfr593-201ENSMUST00000098206 984 ntAPPRIS P2 BASIC3.51□□□□□ -1.85
Hmgb3O54879 Spint3-201ENSMUST00000099097 557 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Hmgb3O54879 Olfr912-201ENSMUST00000217160 5726 ntAPPRIS P1 TSL 2 BASIC3.51□□□□□ -1.85
Hmgb3O54879 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
Hmgb3O54879 AC120375.2-201ENSMUST00000226532 1853 ntBASIC3.51□□□□□ -1.85
Hmgb3O54879 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Hmgb3O54879 Mmrn1-201ENSMUST00000129603 4477 ntAPPRIS P3 TSL 1 (best) BASIC3.51□□□□□ -1.85
Hmgb3O54879 Ms4a2-204ENSMUST00000186978 2391 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
Hmgb3O54879 Btbd35f10-201ENSMUST00000178621 1952 ntAPPRIS P1 BASIC3.51□□□□□ -1.85
Hmgb3O54879 Olfr919-202ENSMUST00000215612 1992 ntAPPRIS ALT2 TSL 5 BASIC3.51□□□□□ -1.85
Hmgb3O54879 Olfr1477-201ENSMUST00000214274 3913 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
Hmgb3O54879 Cd46-203ENSMUST00000162650 6288 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Hmgb3O54879 Fbxw28-204ENSMUST00000200156 1330 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Hmgb3O54879 Gm31371-201ENSMUST00000211848 2088 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Hmgb3O54879 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Hmgb3O54879 Gm38374-201ENSMUST00000194417 2033 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Hmgb3O54879 Gm23322-201ENSMUST00000104464 167 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 Gm13771-201ENSMUST00000117988 238 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 Gm14521-201ENSMUST00000119545 350 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 Gm12564-201ENSMUST00000119860 321 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 Gm12222-201ENSMUST00000121368 260 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Hmgb3O54879 n-R5s30-201ENSMUST00000122624 122 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 Gm13335-201ENSMUST00000129994 471 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
Hmgb3O54879 Gm13209-201ENSMUST00000138492 494 ntTSL 5 BASIC3.5□□□□□ -1.85
Hmgb3O54879 Gm26153-201ENSMUST00000157433 127 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 Gm26187-201ENSMUST00000157693 101 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 Dnaja1-ps-201ENSMUST00000162103 642 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 Serpina3l-ps-201ENSMUST00000163975 1264 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 Vmn1r128-201ENSMUST00000169165 924 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Hmgb3O54879 Lipo1-202ENSMUST00000178735 1188 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Hmgb3O54879 A630095N17Rik-201ENSMUST00000179573 648 ntAPPRIS ALT2 TSL 1 (best) BASIC3.5□□□□□ -1.85
Hmgb3O54879 4930519F16Rik-206ENSMUST00000183292 800 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 Gm28017-201ENSMUST00000183434 126 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 Trav6-4-202ENSMUST00000184650 338 ntAPPRIS ALT2 BASIC3.5□□□□□ -1.85
Hmgb3O54879 Ighv1-3-201ENSMUST00000192764 302 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Hmgb3O54879 Olfr1311-201ENSMUST00000208536 943 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Hmgb3O54879 1700026F02Rik-205ENSMUST00000212266 787 ntTSL 5 BASIC3.5□□□□□ -1.85
Hmgb3O54879 Gm45733-201ENSMUST00000212988 437 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 AC156832.3-201ENSMUST00000215591 435 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 AC157085.1-201ENSMUST00000216343 162 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 CT030124.1-201ENSMUST00000217130 235 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 AC161114.1-201ENSMUST00000218223 474 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 AC159263.3-201ENSMUST00000223434 460 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Hmgb3O54879 Olfr904-201ENSMUST00000058153 933 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Hmgb3O54879 Olfr310-201ENSMUST00000081918 1082 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Hmgb3O54879 Mir133b-201ENSMUST00000083546 119 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 Gm24031-201ENSMUST00000083930 131 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 Gm42671-201ENSMUST00000198013 1604 ntBASIC3.5□□□□□ -1.85
Hmgb3O54879 Olfr741-202ENSMUST00000205518 3406 ntAPPRIS P1 TSL 2 BASIC3.5□□□□□ -1.85
Hmgb3O54879 Olfr1101-202ENSMUST00000214411 3235 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Hmgb3O54879 C87499-203ENSMUST00000107143 1431 ntAPPRIS ALT2 TSL 5 BASIC3.5□□□□□ -1.85
Hmgb3O54879 Zfp990-201ENSMUST00000105741 3044 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Hmgb3O54879 Olfr905-202ENSMUST00000214377 4429 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
Hmgb3O54879 Prlr-202ENSMUST00000124470 9900 ntAPPRIS P3 TSL 1 (best) BASIC3.5□□□□□ -1.85
Hmgb3O54879 Vmn1r210-202ENSMUST00000226180 3116 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
Hmgb3O54879 Ccdc18-201ENSMUST00000047677 5336 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
Hmgb3O54879 Olfr235-204ENSMUST00000214613 2217 ntAPPRIS P1 TSL 3 BASIC3.5□□□□□ -1.85
Hmgb3O54879 Olfr406-203ENSMUST00000217016 2651 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Hmgb3O54879 Olfr112-204ENSMUST00000208832 3173 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Hmgb3O54879 Olfr898-202ENSMUST00000216304 3979 ntAPPRIS ALT2 TSL 5 BASIC3.49□□□□□ -1.85
Hmgb3O54879 Vmn1r37-203ENSMUST00000226886 1308 ntBASIC3.49□□□□□ -1.85
Hmgb3O54879 AC154329.1-201ENSMUST00000224408 3129 ntBASIC3.49□□□□□ -1.85
Hmgb3O54879 AC126439.1-201ENSMUST00000226772 2104 ntBASIC3.49□□□□□ -1.85
Hmgb3O54879 Olfr38-202ENSMUST00000215796 2782 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Hmgb3O54879 Gm37527-201ENSMUST00000192406 3547 ntBASIC3.49□□□□□ -1.85
Hmgb3O54879 Olfr769-203ENSMUST00000216906 4325 ntAPPRIS P1 TSL 5 BASIC3.49□□□□□ -1.85
Hmgb3O54879 Gm22498-201ENSMUST00000104497 86 ntBASIC3.49□□□□□ -1.85
Hmgb3O54879 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC3.49□□□□□ -1.85
Hmgb3O54879 Gm14878-201ENSMUST00000118167 293 ntBASIC3.49□□□□□ -1.85
Hmgb3O54879 Gm6062-201ENSMUST00000120462 631 ntBASIC3.49□□□□□ -1.85
Hmgb3O54879 Gm11804-201ENSMUST00000121663 468 ntBASIC3.49□□□□□ -1.85
Hmgb3O54879 Gm25293-201ENSMUST00000122792 285 ntBASIC3.49□□□□□ -1.85
Hmgb3O54879 2310016D23Rik-201ENSMUST00000130082 388 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Hmgb3O54879 Gm16254-201ENSMUST00000131528 730 ntBASIC3.49□□□□□ -1.85
Hmgb3O54879 Gm16365-204ENSMUST00000143877 779 ntTSL 2 BASIC3.49□□□□□ -1.85
Hmgb3O54879 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC3.49□□□□□ -1.85
Hmgb3O54879 Gm14710-201ENSMUST00000146082 1066 ntBASIC3.49□□□□□ -1.85
Hmgb3O54879 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
Hmgb3O54879 Gm23082-201ENSMUST00000157852 133 ntBASIC3.49□□□□□ -1.85
Hmgb3O54879 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC3.49□□□□□ -1.85
Hmgb3O54879 Gm2959-201ENSMUST00000169844 621 ntBASIC3.49□□□□□ -1.85
Hmgb3O54879 Gm27165-201ENSMUST00000183951 232 ntBASIC3.49□□□□□ -1.85
Hmgb3O54879 Gm5372-201ENSMUST00000187540 409 ntBASIC3.49□□□□□ -1.85
Hmgb3O54879 Gm20812-202ENSMUST00000189550 1230 ntAPPRIS P1 TSL 1 (best) BASIC3.49□□□□□ -1.85
Hmgb3O54879 Gm28924-201ENSMUST00000190012 241 ntBASIC3.49□□□□□ -1.85
Retrieved 100 of 76,532 protein–RNA pairs in 72 ms