Protein–RNA interactions for Protein: O35492

Clk3, Dual specificity protein kinase CLK3, mousemouse

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk3O35492 AV026068-202ENSMUST00000185793 486 ntTSL 2 BASIC4.73□□□□□ -1.65
Clk3O35492 Snhg14-204ENSMUST00000185890 756 ntTSL 5 BASIC4.73□□□□□ -1.65
Clk3O35492 1700016P04Rik-201ENSMUST00000186770 429 ntTSL 1 (best) BASIC4.73□□□□□ -1.65
Clk3O35492 Gm28449-201ENSMUST00000187655 506 ntTSL 3 BASIC4.73□□□□□ -1.65
Clk3O35492 Gm29433-201ENSMUST00000191241 253 ntTSL 5 BASIC4.73□□□□□ -1.65
Clk3O35492 Gm18692-201ENSMUST00000193047 511 ntBASIC4.73□□□□□ -1.65
Clk3O35492 Gm37853-201ENSMUST00000195748 660 ntTSL 3 BASIC4.73□□□□□ -1.65
Clk3O35492 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC4.73□□□□□ -1.65
Clk3O35492 Olfr1479-ps1-201ENSMUST00000207752 382 ntBASIC4.73□□□□□ -1.65
Clk3O35492 9430099M06Rik-201ENSMUST00000210409 742 ntBASIC4.73□□□□□ -1.65
Clk3O35492 Olfr907-202ENSMUST00000214003 1235 ntAPPRIS P1 TSL 3 BASIC4.73□□□□□ -1.65
Clk3O35492 Gm7530-201ENSMUST00000218466 605 ntBASIC4.73□□□□□ -1.65
Clk3O35492 AC162376.1-201ENSMUST00000220120 435 ntBASIC4.73□□□□□ -1.65
Clk3O35492 AC079644.1-201ENSMUST00000220586 405 ntBASIC4.73□□□□□ -1.65
Clk3O35492 Gm46996-201ENSMUST00000220924 408 ntBASIC4.73□□□□□ -1.65
Clk3O35492 Olfr151-202ENSMUST00000221099 929 ntBASIC4.73□□□□□ -1.65
Clk3O35492 AC154808.1-201ENSMUST00000223156 730 ntTSL 5 BASIC4.73□□□□□ -1.65
Clk3O35492 AC161884.2-201ENSMUST00000224513 227 ntBASIC4.73□□□□□ -1.65
Clk3O35492 AV026068-231ENSMUST00000225862 482 ntBASIC4.73□□□□□ -1.65
Clk3O35492 AC139294.1-201ENSMUST00000226708 571 ntBASIC4.73□□□□□ -1.65
Clk3O35492 AC158981.3-201ENSMUST00000226844 1024 ntBASIC4.73□□□□□ -1.65
Clk3O35492 AC140393.2-201ENSMUST00000226894 943 ntBASIC4.73□□□□□ -1.65
Clk3O35492 AC192088.3-201ENSMUST00000227858 831 ntBASIC4.73□□□□□ -1.65
Clk3O35492 Sult1e1-201ENSMUST00000031201 1242 ntAPPRIS P1 TSL 1 (best) BASIC4.73□□□□□ -1.65
Clk3O35492 Olfr1257-201ENSMUST00000060795 1016 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Clk3O35492 Olfr347-201ENSMUST00000078761 943 ntAPPRIS P1 BASIC4.73□□□□□ -1.65
Clk3O35492 Mir199a-2-201ENSMUST00000093618 110 ntBASIC4.73□□□□□ -1.65
Clk3O35492 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC4.73□□□□□ -1.65
Clk3O35492 Vmn2r110-201ENSMUST00000169559 2577 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Clk3O35492 Vmn2r3-201ENSMUST00000170244 2670 ntAPPRIS P2 TSL 5 BASIC4.73□□□□□ -1.65
Clk3O35492 Gm42967-201ENSMUST00000198647 2312 ntBASIC4.73□□□□□ -1.65
Clk3O35492 Fat3-201ENSMUST00000082170 18456 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Clk3O35492 Svet1-201ENSMUST00000209370 3940 ntBASIC4.73□□□□□ -1.65
Clk3O35492 Gm37205-201ENSMUST00000194820 2736 ntBASIC4.73□□□□□ -1.65
Clk3O35492 Olfr126-202ENSMUST00000213844 1958 ntAPPRIS P1 TSL 5 BASIC4.73□□□□□ -1.65
Clk3O35492 Olfr715b-202ENSMUST00000215713 3879 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Clk3O35492 Vmn2r86-201ENSMUST00000170257 3039 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Clk3O35492 Olfr1242-202ENSMUST00000111540 2189 ntAPPRIS P1 TSL 3 BASIC4.72□□□□□ -1.65
Clk3O35492 Zc4h2-203ENSMUST00000120620 2156 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Clk3O35492 Gm12022-201ENSMUST00000143311 1340 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Clk3O35492 BB019430-202ENSMUST00000218015 1320 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Clk3O35492 Iqch-203ENSMUST00000163624 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Clk3O35492 Speer5-ps1-201ENSMUST00000169525 1430 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Clk3O35492 AC165106.3-201ENSMUST00000228191 3843 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Ralgapa1-211ENSMUST00000220367 7473 ntAPPRIS ALT2 TSL 5 BASIC4.72□□□□□ -1.65
Clk3O35492 5730408A14Rik-201ENSMUST00000194955 1824 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Olfr1458-202ENSMUST00000215160 1914 ntAPPRIS P5 TSL 5 BASIC4.72□□□□□ -1.65
Clk3O35492 Vmn1r1-203ENSMUST00000227629 3654 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Clk3O35492 Olfr1258-203ENSMUST00000213720 7098 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Clk3O35492 Gramd1c-201ENSMUST00000036174 3501 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Clk3O35492 Slc5a12-201ENSMUST00000045972 3529 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Clk3O35492 Igkv10-94-201ENSMUST00000103330 347 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Clk3O35492 Trav8n-2-201ENSMUST00000103632 408 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Clk3O35492 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Clk3O35492 Gm25919-201ENSMUST00000104271 132 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Gm12887-201ENSMUST00000106265 360 ntAPPRIS P1 TSL 5 BASIC4.72□□□□□ -1.65
Clk3O35492 Gnrh1-201ENSMUST00000111095 486 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Clk3O35492 Rpl38-ps2-201ENSMUST00000117356 213 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Gm13890-201ENSMUST00000117578 390 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Olfr1083-ps-201ENSMUST00000117704 943 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Clk3O35492 Gm8129-201ENSMUST00000118230 213 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Gm6305-201ENSMUST00000121027 1012 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Gm25293-201ENSMUST00000122792 285 ntBASIC4.72□□□□□ -1.65
Clk3O35492 4933411O13Rik-202ENSMUST00000140815 370 ntTSL 3 BASIC4.72□□□□□ -1.65
Clk3O35492 Gm7846-201ENSMUST00000145844 274 ntBASIC4.72□□□□□ -1.65
Clk3O35492 B230216N24Rik-204ENSMUST00000161661 719 ntTSL 2 BASIC4.72□□□□□ -1.65
Clk3O35492 Skint1-205ENSMUST00000162885 603 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Clk3O35492 Vmn1r113-201ENSMUST00000168794 894 ntTSL 5 BASIC4.72□□□□□ -1.65
Clk3O35492 Rps27-201ENSMUST00000170122 345 ntAPPRIS P1 TSL 1 (best) BASIC4.72□□□□□ -1.65
Clk3O35492 Gm9587-201ENSMUST00000172449 454 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Gm16451-201ENSMUST00000173484 924 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Clk3O35492 Mir3110-201ENSMUST00000175053 80 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Gm22252-201ENSMUST00000179316 79 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Mir7235-201ENSMUST00000183796 56 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Gm27818-201ENSMUST00000184536 159 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Gm28353-201ENSMUST00000186482 570 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Gm28533-201ENSMUST00000186741 570 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Gm18036-201ENSMUST00000195256 272 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Gm18867-201ENSMUST00000198022 1179 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Gm45507-201ENSMUST00000210611 519 ntTSL 5 BASIC4.72□□□□□ -1.65
Clk3O35492 Mir670hg-207ENSMUST00000211619 819 ntTSL 5 BASIC4.72□□□□□ -1.65
Clk3O35492 5430402P08Rik-201ENSMUST00000211799 1143 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Clk3O35492 AC112956.1-201ENSMUST00000213563 492 ntBASIC4.72□□□□□ -1.65
Clk3O35492 CT025617.1-201ENSMUST00000216487 725 ntTSL 5 BASIC4.72□□□□□ -1.65
Clk3O35492 Gm46103-201ENSMUST00000217614 341 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Lilrb4a-205ENSMUST00000217705 1142 ntTSL 1 (best) BASIC4.72□□□□□ -1.65
Clk3O35492 AC160061.1-201ENSMUST00000217766 533 ntTSL 3 BASIC4.72□□□□□ -1.65
Clk3O35492 Olfr1496-203ENSMUST00000219412 1067 ntAPPRIS P2 BASIC4.72□□□□□ -1.65
Clk3O35492 Gm40598-201ENSMUST00000222953 547 ntBASIC4.72□□□□□ -1.65
Clk3O35492 AC156559.1-201ENSMUST00000224158 222 ntBASIC4.72□□□□□ -1.65
Clk3O35492 AC154257.2-201ENSMUST00000224166 340 ntBASIC4.72□□□□□ -1.65
Clk3O35492 CT025538.2-201ENSMUST00000226083 772 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Il6-201ENSMUST00000026845 1141 ntAPPRIS P2 TSL 1 (best) BASIC4.72□□□□□ -1.65
Clk3O35492 Olfr1496-201ENSMUST00000057390 1067 ntAPPRIS ALT1 BASIC4.72□□□□□ -1.65
Clk3O35492 Trappc1-201ENSMUST00000060956 628 ntTSL 3 BASIC4.72□□□□□ -1.65
Clk3O35492 Olfr469-201ENSMUST00000075704 945 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Clk3O35492 Gm16442-201ENSMUST00000079099 924 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Clk3O35492 Mir338-201ENSMUST00000083666 98 ntBASIC4.72□□□□□ -1.65
Clk3O35492 Olfr619-201ENSMUST00000098196 1124 ntAPPRIS P1 BASIC4.72□□□□□ -1.65
Retrieved 100 of 76,532 protein–RNA pairs in 142.5 ms