Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Olfr1177-ps-201ENSMUST00000137895 921 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 1700123O12Rik-203ENSMUST00000145856 425 ntTSL 5 BASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Gm14549-201ENSMUST00000154993 1035 ntTSL 5 BASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Gm3633-202ENSMUST00000163102 231 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Gm21654-201ENSMUST00000188086 691 ntBASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Gm38185-201ENSMUST00000193195 694 ntBASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Obox4-ps7-201ENSMUST00000196144 505 ntBASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 AC117949.2-201ENSMUST00000225900 584 ntBASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Prl8a9-201ENSMUST00000006662 942 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Vmn2r67-201ENSMUST00000168730 2556 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Gm7646-201ENSMUST00000198590 1346 ntBASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Olfr1484-204ENSMUST00000216014 3842 ntAPPRIS P1 TSL 2 BASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Chst9-201ENSMUST00000053017 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Gm37814-201ENSMUST00000195820 3644 ntBASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Gm20767-201ENSMUST00000179071 510 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Rp31-ps19-201ENSMUST00000180929 353 ntBASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Gm7656-201ENSMUST00000182468 1004 ntBASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Gm18537-201ENSMUST00000205709 989 ntBASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Gm44773-201ENSMUST00000207374 557 ntBASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 AC127371.2-201ENSMUST00000228108 1933 ntBASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Hspg2-203ENSMUST00000171332 14176 ntAPPRIS P2 TSL 5 BASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Il2ra-201ENSMUST00000028111 4412 ntAPPRIS P1 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Ctnnd1-220ENSMUST00000111694 6362 ntAPPRIS P5 TSL 5 BASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Smg7-201ENSMUST00000043560 5792 ntAPPRIS ALT2 TSL 1 (best) BASIC4.18□□□□□ -1.74
Col6a3E9PWQ3 Olfr919-203ENSMUST00000217508 1843 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Olfr1369-ps1-202ENSMUST00000213326 3707 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Specc1-201ENSMUST00000049836 6091 ntTSL 5 BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Lrif1-201ENSMUST00000098750 3103 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm23602-201ENSMUST00000157258 132 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm23326-201ENSMUST00000157419 105 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Mir3075-201ENSMUST00000175340 85 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 D830030K20Rik-202ENSMUST00000178670 441 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Trbv9-201ENSMUST00000194494 290 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Fbxo40-201ENSMUST00000075869 5137 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm3962-201ENSMUST00000173027 2587 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Olfr1219-205ENSMUST00000217421 5849 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Trim38-201ENSMUST00000074067 1480 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm45235-201ENSMUST00000208016 4465 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm43588-201ENSMUST00000201862 2298 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Vmn2r91-201ENSMUST00000172359 2571 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Fndc3c1-201ENSMUST00000039447 4859 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Zfp871-202ENSMUST00000159086 5111 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm15745-201ENSMUST00000119807 115 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm12654-201ENSMUST00000120387 587 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm12958-201ENSMUST00000141242 674 ntTSL 3 BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm23540-201ENSMUST00000157543 164 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm22538-201ENSMUST00000158169 299 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm20657-201ENSMUST00000177079 515 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 1600010M07Rik-201ENSMUST00000185931 1204 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm42991-201ENSMUST00000196468 3837 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm43475-201ENSMUST00000196673 400 ntTSL 2 BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm25820-201ENSMUST00000198589 127 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm5995-201ENSMUST00000204107 1273 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm44223-201ENSMUST00000204854 114 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm45425-201ENSMUST00000211727 618 ntTSL 2 BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 AC156639.1-201ENSMUST00000216503 660 ntTSL 3 BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 AC167192.4-201ENSMUST00000224087 993 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Cftr-201ENSMUST00000045706 6303 ntAPPRIS P2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm26535-201ENSMUST00000181602 2600 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Usp54-202ENSMUST00000035340 6495 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Bclaf1-201ENSMUST00000043881 5437 ntAPPRIS ALT2 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Rassf9-202ENSMUST00000219445 5294 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm15629-201ENSMUST00000161819 476 ntTSL 5 BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Mir5118-201ENSMUST00000175551 67 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm29598-201ENSMUST00000188996 588 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm45359-201ENSMUST00000210635 427 ntBASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Tsx-201ENSMUST00000033691 812 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Slc6a15-201ENSMUST00000074204 3607 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Plcz1-201ENSMUST00000032356 2271 ntAPPRIS P1 TSL 1 (best) BASIC4.17□□□□□ -1.74
Col6a3E9PWQ3 Gm45061-201ENSMUST00000204395 2095 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Serbp1-201ENSMUST00000042990 15474 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Heph-203ENSMUST00000113838 4611 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Map9-201ENSMUST00000091014 6218 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Olfr970-203ENSMUST00000215922 1739 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 A730046J19Rik-201ENSMUST00000135687 4707 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Pik3c2a-201ENSMUST00000170430 8044 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Scn11a-201ENSMUST00000070617 5837 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Srpk2-201ENSMUST00000088392 6491 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm12290-201ENSMUST00000145095 2112 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm40038-201ENSMUST00000197878 1370 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm13761-201ENSMUST00000117238 807 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm12677-201ENSMUST00000118668 426 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm14516-201ENSMUST00000120012 252 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm14926-201ENSMUST00000120650 508 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm12001-201ENSMUST00000121727 913 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 n-R5s21-201ENSMUST00000122692 117 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm15733-201ENSMUST00000132957 242 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm24681-201ENSMUST00000158760 107 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm24019-201ENSMUST00000178620 107 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm26243-201ENSMUST00000179260 107 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm37050-201ENSMUST00000193464 466 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm9931-201ENSMUST00000193584 1185 ntBASIC4.16□□□□□ -1.74
Col6a3E9PWQ3 Gm32175-201ENSMUST00000193641 346 ntBASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 64.2 ms