Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Gm43856-201ENSMUST00000197004 369 ntBASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Gm44389-201ENSMUST00000203795 182 ntBASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Gm44808-201ENSMUST00000208887 264 ntTSL 5 BASIC4.48□□□□□ -1.69
Col4a6B1AVK5 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Tnpo1-202ENSMUST00000109401 8453 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Vmn1r214-203ENSMUST00000227652 3906 ntAPPRIS P1 BASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Gm37320-201ENSMUST00000192781 4953 ntBASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Gm38067-201ENSMUST00000192346 1911 ntBASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Gm29730-201ENSMUST00000192986 1396 ntBASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Gm4070-202ENSMUST00000176467 9007 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Cep170-201ENSMUST00000057037 6930 ntAPPRIS P2 TSL 5 BASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Gm43282-201ENSMUST00000201848 2157 ntBASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Olfr330-202ENSMUST00000213188 2836 ntAPPRIS P1 TSL 2 BASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Gm37569-201ENSMUST00000192111 1722 ntBASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Cnot1-201ENSMUST00000068452 8152 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Olfr1217-204ENSMUST00000216592 3992 ntAPPRIS P1 TSL 5 BASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Efhc2-201ENSMUST00000026014 2554 ntAPPRIS P1 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Vmn1r35-202ENSMUST00000227346 1854 ntBASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Gm14621-201ENSMUST00000117709 689 ntBASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Gm11781-201ENSMUST00000118328 472 ntBASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Gm23959-201ENSMUST00000157208 324 ntBASIC4.48□□□□□ -1.69
Col4a6B1AVK5 9330185C12Rik-201ENSMUST00000180837 1009 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Mir6993-201ENSMUST00000184912 65 ntBASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.48□□□□□ -1.69
Col4a6B1AVK5 4930425K10Rik-201ENSMUST00000201190 745 ntTSL 1 (best) BASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Olfr812-202ENSMUST00000203571 1232 ntAPPRIS P1 TSL 3 BASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Gm44822-201ENSMUST00000208559 6389 ntBASIC4.48□□□□□ -1.69
Col4a6B1AVK5 4930401A07Rik-202ENSMUST00000216155 360 ntTSL 2 BASIC4.48□□□□□ -1.69
Col4a6B1AVK5 CAAA01216754.6-201ENSMUST00000217183 398 ntTSL 5 BASIC4.48□□□□□ -1.69
Col4a6B1AVK5 AC153852.1-201ENSMUST00000217881 567 ntBASIC4.48□□□□□ -1.69
Col4a6B1AVK5 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Dmxl2-202ENSMUST00000118600 9465 ntAPPRIS ALT2 TSL 5 BASIC4.48□□□□□ -1.69
Col4a6B1AVK5 Gm9921-201ENSMUST00000173293 4399 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Obox1-201ENSMUST00000067288 1512 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Slc28a2-203ENSMUST00000110525 3911 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm19176-201ENSMUST00000222149 1831 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Ptprd-203ENSMUST00000098005 4542 ntTSL 5 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm38253-201ENSMUST00000194058 4678 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Rorb-201ENSMUST00000040153 8759 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Olfr488-202ENSMUST00000211508 4624 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Olfr488-203ENSMUST00000215173 4605 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Olfr148-202ENSMUST00000216801 2775 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm42910-201ENSMUST00000198917 2921 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Amd2-201ENSMUST00000080898 3218 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Kmt2d-201ENSMUST00000023741 19823 ntAPPRIS P2 TSL 5 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Helz-203ENSMUST00000106746 13147 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm24608-201ENSMUST00000104381 136 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm23319-201ENSMUST00000104467 131 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm23226-201ENSMUST00000116927 103 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm13268-201ENSMUST00000117485 433 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm22718-201ENSMUST00000122701 315 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm14697-201ENSMUST00000147144 648 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm7241-201ENSMUST00000159853 357 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm23365-201ENSMUST00000175019 125 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm25960-201ENSMUST00000175110 125 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm44453-201ENSMUST00000175161 126 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm25195-201ENSMUST00000177656 126 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm29452-201ENSMUST00000187996 313 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm28860-201ENSMUST00000188103 313 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Scgb2b28-ps-201ENSMUST00000188974 337 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm8939-201ENSMUST00000192577 964 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm43039-201ENSMUST00000202883 963 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 AC122317.1-201ENSMUST00000218404 708 ntTSL 5 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 AC158686.2-201ENSMUST00000218599 976 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 AC139750.2-201ENSMUST00000224424 386 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 AC162183.1-202ENSMUST00000225434 904 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 AC154738.1-201ENSMUST00000227054 368 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 CT025548.1-201ENSMUST00000227459 257 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Olfr1145-201ENSMUST00000079711 945 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Cd300ld2-201ENSMUST00000092463 381 ntTSL 5 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm14305-203ENSMUST00000108983 1497 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm2026-202ENSMUST00000109008 1497 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm4724-202ENSMUST00000109046 1497 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm4631-201ENSMUST00000109050 1494 ntTSL 5 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm14434-203ENSMUST00000122097 1497 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm11007-202ENSMUST00000178120 1497 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm2007-202ENSMUST00000178133 1497 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm11007-203ENSMUST00000185834 1494 ntTSL 5 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm2007-203ENSMUST00000189494 1494 ntTSL 5 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 4930421C12Rik-201ENSMUST00000200814 1574 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Ms4a7-201ENSMUST00000025574 1576 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm42996-201ENSMUST00000196116 1636 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 2310003L06Rik-201ENSMUST00000007601 1603 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Zfp72-201ENSMUST00000091481 1629 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Fam126b-207ENSMUST00000161600 8685 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm8267-201ENSMUST00000165003 1751 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Rag2-202ENSMUST00000111227 1857 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Olfr598-202ENSMUST00000214765 2026 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Olfr1489-202ENSMUST00000217182 11140 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 2410141K09Rik-202ENSMUST00000172579 2587 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Vmn1r171-206ENSMUST00000227386 2570 ntAPPRIS ALT2 BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Gm37639-201ENSMUST00000191623 2785 ntBASIC4.47□□□□□ -1.69
Col4a6B1AVK5 Vmn1r52-205ENSMUST00000227893 3108 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Retrieved 100 of 76,532 protein–RNA pairs in 74.9 ms