Protein–RNA interactions for Protein: Q9ESN2

Trim39, E3 ubiquitin-protein ligase TRIM39, mousemouse

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39Q9ESN2 5430402E10Rik-201ENSMUST00000063127 798 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim39Q9ESN2 1700084J12Rik-201ENSMUST00000079057 734 ntBASIC5.9□□□□□ -1.46
Trim39Q9ESN2 Gm24622-201ENSMUST00000082619 162 ntBASIC5.9□□□□□ -1.46
Trim39Q9ESN2 Prdm9-206ENSMUST00000167994 3460 ntAPPRIS P1 TSL 1 (best) BASIC5.9□□□□□ -1.46
Trim39Q9ESN2 Atf2-205ENSMUST00000112010 4037 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Trim39Q9ESN2 Gm26603-201ENSMUST00000181380 2861 ntTSL 5 BASIC5.9□□□□□ -1.47
Trim39Q9ESN2 Atf2-202ENSMUST00000090802 4016 ntTSL 5 BASIC5.9□□□□□ -1.47
Trim39Q9ESN2 4930525G20Rik-201ENSMUST00000181912 2987 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Trim39Q9ESN2 Tex28-202ENSMUST00000114328 1421 ntAPPRIS P1 TSL 5 BASIC5.9□□□□□ -1.47
Trim39Q9ESN2 Gm28183-201ENSMUST00000191321 1406 ntTSL 5 BASIC5.9□□□□□ -1.47
Trim39Q9ESN2 AC131747.2-201ENSMUST00000226121 1895 ntBASIC5.9□□□□□ -1.47
Trim39Q9ESN2 Lrrtm4-206ENSMUST00000136421 4435 ntTSL 1 (best) BASIC5.9□□□□□ -1.47
Trim39Q9ESN2 Gm16513-201ENSMUST00000101023 2832 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm37087-201ENSMUST00000192966 3309 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm37752-201ENSMUST00000193494 3309 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm3985-201ENSMUST00000132101 2515 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Olfr508-201ENSMUST00000072914 1635 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Nebl-206ENSMUST00000131957 1709 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Pik3c2a-204ENSMUST00000206219 5670 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Slc22a29-201ENSMUST00000113298 2271 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Usp47-202ENSMUST00000210309 5816 ntAPPRIS ALT2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gabra3-202ENSMUST00000114554 1790 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm10840-201ENSMUST00000100326 309 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm9850-201ENSMUST00000117916 227 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm12573-201ENSMUST00000118158 286 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm15621-201ENSMUST00000119162 364 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm14731-201ENSMUST00000119216 376 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Apc-ps1-201ENSMUST00000119356 470 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm16511-201ENSMUST00000120019 564 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm5942-201ENSMUST00000120046 439 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm12540-201ENSMUST00000121938 319 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Speer3-201ENSMUST00000124677 1192 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Crem-206ENSMUST00000124747 973 ntTSL 2 BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Mpc1-203ENSMUST00000130559 603 ntTSL 2 BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm16212-202ENSMUST00000143555 420 ntTSL 3 BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm12160-201ENSMUST00000146372 342 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm13598-201ENSMUST00000147939 625 ntTSL 5 BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 C230035I16Rik-202ENSMUST00000153753 643 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm26086-201ENSMUST00000157902 263 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm24729-201ENSMUST00000158225 137 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm25365-201ENSMUST00000158852 121 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm7858-201ENSMUST00000190177 622 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm5731-201ENSMUST00000190969 481 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm20926-201ENSMUST00000194457 696 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Igkv14-134-1-201ENSMUST00000199111 331 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Pomp-203ENSMUST00000201376 383 ntTSL 3 BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm43039-201ENSMUST00000202883 963 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm17990-201ENSMUST00000211728 553 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 AC115793.1-201ENSMUST00000216605 215 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm7034-201ENSMUST00000218638 645 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 AC108401.2-201ENSMUST00000220316 346 ntTSL 3 BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 AC124826.1-201ENSMUST00000221651 325 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm34552-201ENSMUST00000223381 636 ntTSL 5 BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 AC157572.1-201ENSMUST00000227187 825 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 AC154738.7-201ENSMUST00000228606 579 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Clec2j-201ENSMUST00000032517 515 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm5341-201ENSMUST00000058881 489 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm23627-201ENSMUST00000082459 107 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm22502-201ENSMUST00000082488 107 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm24149-201ENSMUST00000082757 107 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm22572-201ENSMUST00000082985 105 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm23733-201ENSMUST00000083750 106 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm4017-201ENSMUST00000084813 338 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm16261-201ENSMUST00000096813 205 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Dusp16-204ENSMUST00000149776 3305 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm17094-201ENSMUST00000169881 3334 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Clca3b-201ENSMUST00000159989 3361 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 C530043A13Rik-203ENSMUST00000189247 3364 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm43360-201ENSMUST00000197656 2887 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Olfr1321-202ENSMUST00000215373 4482 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm6902-201ENSMUST00000179072 1335 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Pira2-201ENSMUST00000108615 3462 ntAPPRIS P2 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm15922-201ENSMUST00000118068 3462 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm5891-202ENSMUST00000186212 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm10662-202ENSMUST00000186928 2495 ntAPPRIS P1 TSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 1700071M16Rik-203ENSMUST00000169733 2504 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Arhgef38-202ENSMUST00000147041 6541 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Vmn2r120-201ENSMUST00000165781 2571 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Mcmdc2-205ENSMUST00000171802 2553 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Olfr305-202ENSMUST00000213255 3749 ntAPPRIS P1 TSL 5 BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm3286-202ENSMUST00000200932 2028 ntAPPRIS ALT2 TSL 5 BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm1966-201ENSMUST00000184540 7293 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 9430062P05Rik-201ENSMUST00000192703 3345 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm15101-201ENSMUST00000178818 1502 ntBASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Ctage5-217ENSMUST00000176892 2784 ntTSL 1 (best) BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm13977-201ENSMUST00000133648 4049 ntTSL 5 BASIC5.89□□□□□ -1.47
Trim39Q9ESN2 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Olfr1094-202ENSMUST00000217509 1693 ntAPPRIS P1 TSL 5 BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Acsl4-204ENSMUST00000112907 5137 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Dock2-203ENSMUST00000101365 3785 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Ppp2r3a-201ENSMUST00000066773 4461 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Pold3-209ENSMUST00000208670 1716 ntTSL 5 BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Dtna-203ENSMUST00000220904 3860 ntTSL 1 (best) BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Zfp148-ps1-201ENSMUST00000211201 2453 ntBASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Cdh17-202ENSMUST00000108303 3287 ntTSL 2 BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Vmn2r50-201ENSMUST00000074943 2586 ntAPPRIS P2 TSL 5 BASIC5.88□□□□□ -1.47
Trim39Q9ESN2 Dgkb-203ENSMUST00000220990 4085 ntAPPRIS P1 TSL 1 (best) BASIC5.88□□□□□ -1.47
Retrieved 100 of 76,532 protein–RNA pairs in 74.7 ms