Protein–RNA interactions for Protein: Q8CFK2

Brf1, Transcription factor IIIB 90 kDa subunit, mousemouse

Predictions only

Length 676 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Brf1Q8CFK2 Gm29131-202ENSMUST00000189485 1498 ntTSL 5 BASIC5.96□□□□□ -1.46
Brf1Q8CFK2 Gm28284-202ENSMUST00000190221 1498 ntTSL 5 BASIC5.96□□□□□ -1.46
Brf1Q8CFK2 Gm28764-203ENSMUST00000191194 1498 ntTSL 5 BASIC5.96□□□□□ -1.46
Brf1Q8CFK2 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.46
Brf1Q8CFK2 Olfr695-201ENSMUST00000216868 3953 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Zfp931-201ENSMUST00000108923 1372 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Gm21244-202ENSMUST00000189201 3115 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Fam83b-201ENSMUST00000098546 3136 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Hyal5-201ENSMUST00000031689 1838 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Zfp280c-201ENSMUST00000072292 4045 ntAPPRIS ALT2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Txndc8-201ENSMUST00000102897 620 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Lipe-203ENSMUST00000105177 1251 ntBASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Gm12717-201ENSMUST00000118427 983 ntBASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Gm14898-201ENSMUST00000120202 645 ntBASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Gm14905-201ENSMUST00000122351 639 ntBASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Gm12603-202ENSMUST00000146678 618 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Gm24925-201ENSMUST00000178157 107 ntBASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Gm18828-202ENSMUST00000181035 310 ntBASIC5.95□□□□□ -1.46
Brf1Q8CFK2 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 1810007C17Rik-201ENSMUST00000187665 710 ntTSL 1 (best) BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Gm28113-201ENSMUST00000188280 229 ntBASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Gm28191-201ENSMUST00000189112 211 ntBASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Gm33206-201ENSMUST00000193544 454 ntTSL 2 BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Gm37174-201ENSMUST00000194699 3058 ntBASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Gm36520-201ENSMUST00000200449 400 ntTSL 3 BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Gm43418-201ENSMUST00000201334 428 ntBASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Gm18011-201ENSMUST00000203717 565 ntBASIC5.95□□□□□ -1.46
Brf1Q8CFK2 D830005E20Rik-202ENSMUST00000219691 971 ntTSL 5 BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 AC154724.1-201ENSMUST00000225782 821 ntBASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Erich6b-201ENSMUST00000022579 869 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 AC133283.1-201ENSMUST00000228443 859 ntBASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Fabp2-201ENSMUST00000023820 965 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 4930583I09Rik-201ENSMUST00000024896 630 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Kcnh8-201ENSMUST00000039366 4287 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Olfr459-201ENSMUST00000050412 1109 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Gm10436-201ENSMUST00000071580 1883 ntAPPRIS P2 TSL 1 (best) BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Olfr193-201ENSMUST00000076262 1009 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Olfr1505-201ENSMUST00000081520 1103 ntAPPRIS P1 BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Mir463-201ENSMUST00000093570 75 ntBASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Pof1b-201ENSMUST00000039887 3886 ntAPPRIS P1 TSL 1 (best) BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 4732496C06Rik-201ENSMUST00000206533 2500 ntBASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Olfr1217-202ENSMUST00000213669 3839 ntAPPRIS P1 TSL 5 BASIC5.95□□□□□ -1.46
Brf1Q8CFK2 Gm44250-201ENSMUST00000203092 4229 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 4933403O08Rik-203ENSMUST00000164272 1517 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Gm9972-201ENSMUST00000069051 1533 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Prame-201ENSMUST00000033786 1395 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Vmn2r33-201ENSMUST00000165921 2586 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Ctsj-202ENSMUST00000224224 1421 ntAPPRIS ALT2 BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Nlrp4a-204ENSMUST00000146907 3479 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Mir804-201ENSMUST00000103251 95 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Sult2a5-201ENSMUST00000108525 1046 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Gm11984-201ENSMUST00000118142 766 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Gm11409-201ENSMUST00000118621 403 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Gm11822-201ENSMUST00000119177 415 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Gm12704-201ENSMUST00000119789 464 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Gm7879-201ENSMUST00000122204 774 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Gm6650-201ENSMUST00000166710 614 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Gm17081-201ENSMUST00000167363 478 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Gm3182-202ENSMUST00000169364 997 ntAPPRIS ALT2 TSL 5 BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Vmn1r224-201ENSMUST00000170076 897 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Vmn2r-ps85-201ENSMUST00000174022 940 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Gm10267-202ENSMUST00000181652 341 ntAPPRIS P2 TSL 5 BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Rian-217ENSMUST00000183266 687 ntTSL 3 BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Gm27355-201ENSMUST00000185045 128 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 1700027H10Rik-201ENSMUST00000186818 584 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 1810022K09Rik-204ENSMUST00000186870 1174 ntAPPRIS ALT2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 1700010J16Rik-202ENSMUST00000189116 890 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Gm28769-201ENSMUST00000190176 615 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Amd-ps5-201ENSMUST00000198406 989 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Olfr1406-202ENSMUST00000201132 2952 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Gm43100-201ENSMUST00000202985 674 ntTSL 5 BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Gm8189-203ENSMUST00000211159 1225 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Gm46136-201ENSMUST00000214730 565 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Olfr1139-ps1-201ENSMUST00000217634 168 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 AC166263.1-201ENSMUST00000218586 238 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Gm34215-202ENSMUST00000223024 492 ntTSL 5 BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Prl7c1-201ENSMUST00000072943 1016 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Plac1-201ENSMUST00000074861 1041 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Gm23975-201ENSMUST00000082685 106 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 n-R5s196-201ENSMUST00000083136 117 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Olfr1208-201ENSMUST00000099810 1075 ntAPPRIS P1 BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 CT009754.2-201ENSMUST00000221683 3661 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Gm10727-201ENSMUST00000197107 1602 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Polk-201ENSMUST00000022172 4225 ntAPPRIS P2 TSL 1 (best) BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Olfr1065-201ENSMUST00000213789 2154 ntAPPRIS P1 TSL 3 BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 AC124579.1-201ENSMUST00000223468 2520 ntBASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Vmn2r117-201ENSMUST00000171996 2574 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Vcam1-201ENSMUST00000029574 3469 ntAPPRIS P1 TSL 1 (best) BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Vav3-202ENSMUST00000106576 3123 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Olfr843-203ENSMUST00000214267 7071 ntAPPRIS P1 TSL 5 BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Lcorl-204ENSMUST00000087164 4979 ntTSL 1 (best) BASIC5.94□□□□□ -1.46
Brf1Q8CFK2 Vmn1r90-202ENSMUST00000226264 7796 ntAPPRIS P2 BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Jchain-201ENSMUST00000087033 1393 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm37529-201ENSMUST00000195618 4321 ntTSL 1 (best) BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm44171-201ENSMUST00000203701 2109 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm20679-201ENSMUST00000177285 1402 ntBASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Cyp2c40-201ENSMUST00000160476 1803 ntAPPRIS P1 TSL 1 (best) BASIC5.93□□□□□ -1.46
Brf1Q8CFK2 Gm43313-201ENSMUST00000201398 2235 ntBASIC5.93□□□□□ -1.46
Retrieved 100 of 76,532 protein–RNA pairs in 122.8 ms