Protein–RNA interactions for Protein: Q62318

Trim28, Transcription intermediary factor 1-beta, mousemouse

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28Q62318 Pfpl-201ENSMUST00000168148 3918 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Trim28Q62318 4932411K12Rik-201ENSMUST00000190493 3156 ntTSL 2 BASIC6.29□□□□□ -1.4
Trim28Q62318 Lifr-203ENSMUST00000171588 9655 ntAPPRIS P3 TSL 5 BASIC6.29□□□□□ -1.4
Trim28Q62318 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim28Q62318 Olfr31-203ENSMUST00000217035 4126 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Trim28Q62318 Zp3r-202ENSMUST00000128128 1926 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Trim28Q62318 Gm6545-201ENSMUST00000217186 1786 ntBASIC6.29□□□□□ -1.4
Trim28Q62318 Olfr884-202ENSMUST00000181088 3185 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Trim28Q62318 Gm37764-201ENSMUST00000194664 2150 ntBASIC6.28□□□□□ -1.4
Trim28Q62318 Mmp1a-202ENSMUST00000217651 2011 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim28Q62318 Mmp1a-201ENSMUST00000034492 2022 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trim28Q62318 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Trim28Q62318 Ubqlnl-201ENSMUST00000059121 2298 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trim28Q62318 Gm37303-201ENSMUST00000194202 1559 ntBASIC6.28□□□□□ -1.4
Trim28Q62318 Gm24469-201ENSMUST00000104487 131 ntBASIC6.28□□□□□ -1.4
Trim28Q62318 Zfp972-202ENSMUST00000108934 561 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim28Q62318 Gm14358-201ENSMUST00000118458 403 ntBASIC6.28□□□□□ -1.4
Trim28Q62318 Gm12186-201ENSMUST00000119050 945 ntBASIC6.28□□□□□ -1.4
Trim28Q62318 2210408F21Rik-202ENSMUST00000124811 384 ntTSL 2 BASIC6.28□□□□□ -1.4
Trim28Q62318 Gm15288-201ENSMUST00000126640 653 ntTSL 3 BASIC6.28□□□□□ -1.4
Trim28Q62318 Gm3669-203ENSMUST00000133259 677 ntTSL 2 BASIC6.28□□□□□ -1.4
Trim28Q62318 Gm12259-201ENSMUST00000138391 328 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim28Q62318 Gm14974-202ENSMUST00000150003 677 ntTSL 2 BASIC6.28□□□□□ -1.4
Trim28Q62318 Gm2165-204ENSMUST00000153493 677 ntTSL 2 BASIC6.28□□□□□ -1.4
Trim28Q62318 Gm2101-205ENSMUST00000156730 677 ntTSL 2 BASIC6.28□□□□□ -1.4
Trim28Q62318 Gm26085-201ENSMUST00000157900 116 ntBASIC6.28□□□□□ -1.4
Trim28Q62318 Gm22116-201ENSMUST00000158791 141 ntBASIC6.28□□□□□ -1.4
Trim28Q62318 Vmn1r175-201ENSMUST00000166141 915 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trim28Q62318 Gm18128-201ENSMUST00000172625 511 ntBASIC6.28□□□□□ -1.4
Trim28Q62318 Gm21959-201ENSMUST00000178439 452 ntBASIC6.28□□□□□ -1.4
Trim28Q62318 Gm20594-201ENSMUST00000179797 449 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trim28Q62318 1700027I24Rik-201ENSMUST00000183612 696 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim28Q62318 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC6.28□□□□□ -1.4
Trim28Q62318 Gm28116-201ENSMUST00000189064 387 ntBASIC6.28□□□□□ -1.4
Trim28Q62318 Scgb1b8-ps-201ENSMUST00000189652 249 ntBASIC6.28□□□□□ -1.4
Trim28Q62318 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim28Q62318 Gm37636-201ENSMUST00000193583 359 ntBASIC6.28□□□□□ -1.4
Trim28Q62318 Gm8911-201ENSMUST00000213986 652 ntBASIC6.28□□□□□ -1.4
Trim28Q62318 2010107E04Rik-201ENSMUST00000021719 366 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim28Q62318 AC139754.1-201ENSMUST00000219418 950 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim28Q62318 CT485612.3-201ENSMUST00000222179 408 ntBASIC6.28□□□□□ -1.4
Trim28Q62318 AC121960.3-201ENSMUST00000227077 623 ntBASIC6.28□□□□□ -1.4
Trim28Q62318 Resp18-201ENSMUST00000039534 748 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim28Q62318 Ear6-201ENSMUST00000074477 713 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim28Q62318 Ceacam11-201ENSMUST00000094799 1054 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim28Q62318 Olfr1256-201ENSMUST00000099763 921 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trim28Q62318 Trim30a-201ENSMUST00000076922 3771 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim28Q62318 Gm11264-201ENSMUST00000143755 2969 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Trim28Q62318 Tgif1-202ENSMUST00000118283 1388 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim28Q62318 Mmp16-201ENSMUST00000029881 5011 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim28Q62318 Ccr2-204ENSMUST00000171719 2265 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
Trim28Q62318 Olfr107-204ENSMUST00000215974 2282 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trim28Q62318 Gm43428-201ENSMUST00000200108 3845 ntBASIC6.28□□□□□ -1.4
Trim28Q62318 Gm45853-201ENSMUST00000212310 3171 ntBASIC6.28□□□□□ -1.4
Trim28Q62318 Olfr329-ps-203ENSMUST00000219448 4052 ntAPPRIS P2 TSL 5 BASIC6.28□□□□□ -1.4
Trim28Q62318 Olfr1444-202ENSMUST00000213606 1872 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Trim28Q62318 Vmn1r209-203ENSMUST00000227265 6550 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Trim28Q62318 Gm5946-202ENSMUST00000182652 2724 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim28Q62318 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim28Q62318 AC124556.1-201ENSMUST00000218256 1319 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Vmn2r42-204ENSMUST00000142934 3694 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim28Q62318 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Trim28Q62318 Dcun1d1-212ENSMUST00000198389 3020 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim28Q62318 Vps50-202ENSMUST00000164052 4824 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim28Q62318 Gm14886-201ENSMUST00000117208 2629 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Mir711-201ENSMUST00000102188 82 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Ifit2-201ENSMUST00000102826 3818 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim28Q62318 Gm23014-201ENSMUST00000104144 130 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Gm8569-201ENSMUST00000117630 647 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Gm14082-201ENSMUST00000118582 801 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Gm12988-201ENSMUST00000119054 478 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Gm11891-201ENSMUST00000121241 619 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Mup-ps22-201ENSMUST00000121611 243 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Pnpla8-204ENSMUST00000143771 2974 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim28Q62318 Crem-222ENSMUST00000144496 978 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim28Q62318 Gm24251-201ENSMUST00000157324 114 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Gm17657-201ENSMUST00000168877 510 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trim28Q62318 Vmn1r-ps74-201ENSMUST00000173518 570 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Snhg14-202ENSMUST00000185693 734 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim28Q62318 Gm28688-201ENSMUST00000187301 268 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Gm3496-201ENSMUST00000188283 745 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Gm4714-201ENSMUST00000203395 279 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Gm18011-201ENSMUST00000203717 565 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Bsph1-202ENSMUST00000204715 707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim28Q62318 AC124542.1-201ENSMUST00000205588 908 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Gm44816-201ENSMUST00000206666 477 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Olfr663-201ENSMUST00000209914 959 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trim28Q62318 5330439M10Rik-201ENSMUST00000218667 348 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Trim28Q62318 CR974592.1-201ENSMUST00000220422 574 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Gm26861-206ENSMUST00000222633 1039 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim28Q62318 Gm30239-202ENSMUST00000223193 631 ntTSL 5 BASIC6.27□□□□□ -1.41
Trim28Q62318 AL590614.1-201ENSMUST00000226037 268 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 AC113031.2-201ENSMUST00000226132 579 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 AC123061.2-201ENSMUST00000226234 802 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 AC107453.2-201ENSMUST00000227714 655 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Olfr847-201ENSMUST00000079620 939 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Trim28Q62318 Gm25586-201ENSMUST00000082499 112 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Gm11251-201ENSMUST00000119593 2800 ntBASIC6.27□□□□□ -1.41
Trim28Q62318 Angptl3-201ENSMUST00000030280 1482 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Trim28Q62318 Vmn2r-ps117-201ENSMUST00000176899 2188 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 76.3 ms